VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mdv1-miR-m1
gcuuguu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`gcttgtt`	7
MIMAT0036753	oha-miR-1788-5p	2	`.......`	8	100
MIMAT0035684	bra-miR408-3p	2	`.......`	8	100
MIMAT0032412	ssa-miR-1788-5p	2	`.......`	8	100
MIMAT0030352	hhi-miR-1788	2	`.......`	8	100
MIMAT0029433	ipu-miR-1788	2	`.......`	8	100
MIMAT0025407	tgu-miR-1788	2	`.......`	8	100
MIMAT0021805	aca-miR-1788-5p	2	`.......`	8	100
MIMAT0019561	pma-miR-1788a-5p	2	`.......`	8	100
MIMAT0011294	dre-miR-1788-5p	2	`.......`	8	100
MIMAT0009772	nve-miR-2027-5p	1	`.......`	7	100
MIMAT0007700	gga-miR-1788-5p	2	`.......`	8	100
MIMAT0007504	gga-miR-1632-5p	2	`.......`	8	100
MIMAT0003920	mdv1-miR-M1-5p	2	`.......`	8	100
MIMAT0037125	ata-miR2275b-3p	1	`_......`	6	85
MIMAT0037012	ssc-miR-9794-3p	3	`_......`	8	85
MIMAT0036947	oha-miR-7-2-3p	7	`_......`	2	85
MIMAT0036649	oha-miR-100-3p	8	`......_`	3	85
MIMAT0036276	chi-miR-544-5p	2	`_......`	7	85
MIMAT0035582	dvi-miR-963-5p	6	`_......`	1	85
MIMAT0035494	bdi-miR9487	2	`_......`	7	85
MIMAT0035334	gsa-miR-76b-5p	2	`_......`	7	85
MIMAT0035098	efu-miR-338	8	`_......`	3	85
MIMAT0034050	gra-miR8679	6	`......_`	1	85
MIMAT0033229	ppc-miR-8342-5p	8	`_......`	3	85
MIMAT0033122	ppc-miR-8301-3p	8	`_......`	3	85
MIMAT0032700	ssa-miR-7a-7-3p	7	`_......`	2	85
MIMAT0032699	ssa-miR-7a-6-3p	7	`_......`	2	85
MIMAT0032698	ssa-miR-7a-5-3p	7	`_......`	2	85
MIMAT0032697	ssa-miR-7a-4-3p	7	`_......`	2	85
MIMAT0032695	ssa-miR-7a-2-3p	7	`_......`	2	85
MIMAT0032694	ssa-miR-7a-1-3p	7	`_......`	2	85
MIMAT0032279	ssa-miR-100a-2-3p	6	`......_`	1	85
MIMAT0032278	ssa-miR-100a-3p	6	`......_`	1	85
MIMAT0031687	bbe-miR-4865-5p	1	`......_`	6	85
MIMAT0031565	ppe-miR6288c-5p	1	`_......`	6	85
MIMAT0031560	ppe-miR6288b-5p	1	`_......`	6	85
MIMAT0031399	mmu-miR-8097	6	`_......`	1	85
MIMAT0029783	sci-miR-7642-5p	2	`_......`	7	85
MIMAT0026437	sbi-miR6230-3p	7	`_......`	2	85
MIMAT0027949	mmu-miR-7022-3p	6	`......_`	1	85
MIMAT0027839	mmu-miR-6968-3p	6	`......_`	1	85
MIMAT0025612	gga-miR-6552-3p	7	`_......`	2	85
MIMAT0022215	mtr-miR5557-5p	6	`_......`	1	85
MIMAT0022158	osa-miR2275d	1	`_......`	6	85
MIMAT0021009	gma-miR1535b	1	`_......`	6	85
MIMAT0020147	dme-miR-4940-3p	6	`_......`	1	85
MIMAT0020099	bfl-miR-4865-5p	1	`......_`	6	85
MIMAT0019438	pma-miR-100a-3p	6	`......_`	1	85
MIMAT0019371	pma-miR-7a-3p	7	`_......`	2	85
MIMAT0019298	oar-miR-544-5p	2	`_......`	7	85
MIMAT0018328	gma-miR4409	7	`_......`	2	85
MIMAT0018299	gma-miR4387a	6	`_......`	1	85
MIMAT0018876	tca-miR-3889-5p	2	`_......`	7	85
MIMAT0018723	tca-miR-3839-3p	2	`_......`	7	85
MIMAT0018075	hsa-miR-3655	1	`......_`	6	85
MIMAT0018050	vvi-miR3638-3p	8	`_......`	3	85
MIMAT0016418	cin-miR-375-3p	1	`_......`	6	85
MIMAT0016381	gga-miR-3531-5p	3	`_......`	8	85
MIMAT0017772	esi-miR3457-3p	3	`......_`	8	85
MIMAT0015615	bmo-miR-3409	8	`_......`	3	85
MIMAT0015507	bmo-miR-3319	6	`......_`	1	85
MIMAT0014633	tgu-miR-100-3p	6	`......_`	1	85
MIMAT0026968	tgu-miR-2973-3p	2	`_......`	7	85
MIMAT0014363	cqu-miR-988-3p	3	`_......`	8	85
MIMAT0017359	rno-miR-544-5p	1	`_......`	6	85
MIMAT0013727	bmo-miR-2817	6	`_......`	1	85
MIMAT0012515	dsi-miR-982a	8	`_......`	3	85
MIMAT0019115	tca-miR-125-3p	6	`......_`	1	85
MIMAT0007625	gga-miR-1726	3	`......_`	8	85
MIMAT0007476	gga-miR-1610	3	`......_`	8	85
MIMAT0007398	gma-miR1535a	1	`_......`	6	85
MIMAT0015258	cin-miR-126-5p	2	`_......`	7	85
MIMAT0017282	mmu-miR-544-5p	2	`_......`	7	85
MIMAT0026656	mdo-miR-100-3p	3	`......_`	8	85
MIMAT0026580	mml-miR-100-3p	3	`......_`	8	85
MIMAT0001579	hcmv-miR-US5-1	8	`......_`	3	85
MIMAT0001312	cbr-miR-354	3	`_......`	8	85
MIMAT0026539	gga-miR-100-3p	3	`......_`	8	85
MIMAT0017091	rno-miR-7a-2-3p	7	`_......`	2	85
MIMAT0000696	cel-miR-354-3p	3	`_......`	8	85
MIMAT0017071	mmu-miR-7b-3p	7	`_......`	2	85
MIMAT0017070	mmu-miR-7a-2-3p	7	`_......`	2	85
MIMAT0017051	mmu-miR-100-3p	6	`......_`	1	85