VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>rlcv-miR-rl1-10-5p
ucggguu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcgggtt`	7
MIMAT0033061	ppc-miR-8280-5p	7	`.......`	1	100
MIMAT0033057	ppc-miR-8279-5p	7	`.......`	1	100
MIMAT0032919	ppc-miR-8233-3p	7	`.......`	1	100
MIMAT0032892	ppc-miR-8225-5p	7	`.......`	1	100
MIMAT0027959	mmu-miR-7027-3p	1	`.......`	7	100
MIMAT0025530	bta-miR-2285o	8	`.......`	2	100
MIMAT0023501	hco-miR-5987	7	`.......`	1	100
MIMAT0023129	mtr-miR5749	2	`.......`	8	100
MIMAT0021470	asu-miR-76-5p	1	`.......`	7	100
MIMAT0021433	asu-miR-43d-5p	7	`.......`	1	100
MIMAT0011701	ppc-miR-2266	7	`.......`	1	100
MIMAT0019088	rlcv-miR-rL1-10-5p	2	`.......`	8	100
MIMAT0037001	ssc-miR-9784-5p	3	`_......`	8	85
MIMAT0036966	oha-miR-99b-5p	6	`_......`	1	85
MIMAT0036964	oha-miR-99a-5p	6	`_......`	1	85
MIMAT0036675	oha-miR-125b-3p	2	`_......`	7	85
MIMAT0036648	oha-miR-100-5p	6	`_......`	1	85
MIMAT0036563	tch-miR-99a-5p	6	`_......`	1	85
MIMAT0036554	tch-miR-100-5p	6	`_......`	1	85
MIMAT0036312	chi-miR-99a-5p	6	`_......`	1	85
MIMAT0035897	chi-miR-100-5p	6	`_......`	1	85
MIMAT0035212	dme-miR-9374-3p	3	`......_`	8	85
MIMAT0035053	efu-miR-125a	2	`_......`	7	85
MIMAT0034944	efu-miR-99a	7	`_......`	2	85
MIMAT0034818	efu-miR-9223c	1	`......_`	6	85
MIMAT0034649	eca-miR-9102	2	`_......`	7	85
MIMAT0033765	pxy-miR-8524-5p	2	`_......`	7	85
MIMAT0033482	str-miR-8396-5p	1	`_......`	6	85
MIMAT0033432	str-miR-8386-5p	1	`_......`	6	85
MIMAT0032718	ssa-miR-99-5p	6	`_......`	1	85
MIMAT0032306	ssa-miR-125a-2-3p	2	`_......`	7	85
MIMAT0032305	ssa-miR-125a-3p	2	`_......`	7	85
MIMAT0032277	ssa-miR-100a-5p	6	`_......`	1	85
MIMAT0031570	bbe-miR-100-5p	6	`_......`	1	85
MIMAT0030472	prd-miR-7867-5p	6	`_......`	1	85
MIMAT0030454	prd-miR-100-5p	6	`_......`	1	85
MIMAT0030064	oar-miR-99a	6	`_......`	1	85
MIMAT0032224	lva-miR-2003-5p	6	`_......`	1	85
MIMAT0032156	pmi-miR-100-5p	6	`_......`	1	85
MIMAT0029533	ipu-miR-99b	6	`_......`	1	85
MIMAT0029532	ipu-miR-99a	6	`_......`	1	85
MIMAT0029385	ipu-miR-100	6	`_......`	1	85
MIMAT0026327	ccr-miR-99	6	`_......`	1	85
MIMAT0026195	ccr-miR-100	6	`_......`	1	85
MIMAT0025767	gga-miR-6666-3p	1	`......_`	6	85
MIMAT0024587	bta-miR-2285l	8	`_......`	3	85
MIMAT0024438	mse-miR-100	6	`_......`	1	85
MIMAT0024016	cgr-miR-99a-5p	6	`_......`	1	85
MIMAT0023726	cgr-miR-100-5p	6	`_......`	1	85
MIMAT0023674	ame-miR-6050	2	`_......`	7	85
MIMAT0022800	sha-miR-100	6	`_......`	1	85
MIMAT0022614	ola-miR-100	6	`_......`	1	85
MIMAT0021998	aca-miR-99b-5p	6	`_......`	1	85
MIMAT0021996	aca-miR-99a-5p	6	`_......`	1	85
MIMAT0021709	aca-miR-100	6	`_......`	1	85
MIMAT0021493	asu-miR-100d-5p	6	`_......`	1	85
MIMAT0021489	asu-miR-100b-5p	6	`_......`	1	85
MIMAT0021487	asu-miR-100a-5p	6	`_......`	1	85
MIMAT0020652	rgl-miR5141	8	`......_`	3	85
MIMAT0020169	dme-miR-4954-5p	8	`......_`	3	85
MIMAT0020164	dme-miR-4951-5p	1	`......_`	6	85
MIMAT0019439	pma-miR-100b	6	`_......`	1	85
MIMAT0019437	pma-miR-100a-5p	6	`_......`	1	85
MIMAT0016562	cin-miR-4036-3p	3	`_......`	8	85
MIMAT0017801	rno-miR-3546	8	`_......`	3	85
MIMAT0015677	nvi-miR-100	6	`_......`	1	85
MIMAT0014524	tgu-miR-99-5p	6	`_......`	1	85
MIMAT0014511	tgu-miR-100-5p	6	`_......`	1	85
MIMAT0014685	tgu-miR-125-2-3p	2	`_......`	7	85
MIMAT0014387	cqu-miR-100-5p	6	`_......`	1	85
MIMAT0014291	aae-miR-100	6	`_......`	1	85
MIMAT0014114	bma-miR-100c	6	`_......`	1	85
MIMAT0014113	bma-miR-100b	6	`_......`	1	85
MIMAT0014112	bma-miR-100a	6	`_......`	1	85
MIMAT0013911	ssc-miR-100	6	`_......`	1	85
MIMAT0013896	ssc-miR-99a	6	`_......`	1	85
MIMAT0013184	eca-miR-99a	6	`_......`	1	85
MIMAT0012980	eca-miR-100	6	`_......`	1	85
MIMAT0013648	bmo-miR-375-5p	6	`......_`	1	85
MIMAT0013596	bmo-miR-100	6	`_......`	1	85
MIMAT0012683	isc-miR-100	6	`_......`	1	85
MIMAT0012637	dpu-miR-100	6	`_......`	1	85
MIMAT0012485	dsi-miR-981-5p	1	`_......`	6	85
MIMAT0012219	dps-miR-981-5p	1	`_......`	6	85
MIMAT0011733	ppc-miR-2274	6	`_......`	1	85
MIMAT0011726	ppc-miR-2271	6	`_......`	1	85
MIMAT0011696	ppc-miR-55b	6	`_......`	1	85
MIMAT0011695	ppc-miR-54	6	`_......`	1	85
MIMAT0009802	nve-miR-2040a-5p	1	`......_`	6	85
MIMAT0009744	spu-miR-2003-5p	6	`_......`	1	85
MIMAT0009623	sko-miR-100	6	`_......`	1	85
MIMAT0009577	lgi-miR-100	6	`_......`	1	85
MIMAT0009524	cte-miR-100	6	`_......`	1	85
MIMAT0009481	bfl-miR-100-5p	6	`_......`	1	85
MIMAT0009215	bta-miR-100	6	`_......`	1	85
MIMAT0009059	dya-miR-100	6	`_......`	1	85
MIMAT0009048	dwi-miR-100	6	`_......`	1	85
MIMAT0008973	dvi-miR-100-5p	6	`_......`	1	85
MIMAT0008872	dsi-miR-100	6	`_......`	1	85
MIMAT0008796	dse-miR-100	6	`_......`	1	85
MIMAT0008718	dpe-miR-100	6	`_......`	1	85
MIMAT0008637	dmo-miR-100	6	`_......`	1	85
MIMAT0008557	dgr-miR-100	6	`_......`	1	85
MIMAT0008488	der-miR-100	6	`_......`	1	85
MIMAT0008478	dan-miR-100	6	`_......`	1	85
MIMAT0008369	tca-miR-100-5p	6	`_......`	1	85
MIMAT0006668	cfa-miR-99a	6	`_......`	1	85
MIMAT0007419	gga-miR-1561	3	`_......`	8	85
MIMAT0007183	oan-miR-99-5p	6	`_......`	1	85
MIMAT0007049	oan-miR-125-3p	2	`_......`	7	85
MIMAT0007046	oan-miR-100-5p	6	`_......`	1	85
MIMAT0005396	cre-miR1151b-3p	2	`_......`	7	85
MIMAT0020878	dme-miR-981-5p	1	`_......`	6	85
MIMAT0004420	ame-miR-100	6	`_......`	1	85
MIMAT0031106	mdo-miR-125b-2-3p	2	`_......`	7	85
MIMAT0004097	mdo-miR-100-5p	6	`_......`	1	85
MIMAT0003682	xtr-miR-100	6	`_......`	1	85
MIMAT0003582	xtr-miR-99	6	`_......`	1	85
MIMAT0003537	bta-miR-99a-5p	6	`_......`	1	85
MIMAT0003064	tni-miR-100	6	`_......`	1	85
MIMAT0003063	fru-miR-100	6	`_......`	1	85
MIMAT0002424	lla-miR-100	6	`_......`	1	85
MIMAT0002423	sla-miR-100	6	`_......`	1	85
MIMAT0002422	mml-miR-100-5p	6	`_......`	1	85
MIMAT0002421	ptr-miR-100	6	`_......`	1	85
MIMAT0002420	ppy-miR-100	6	`_......`	1	85
MIMAT0002419	ppa-miR-100	6	`_......`	1	85
MIMAT0002418	age-miR-100	6	`_......`	1	85
MIMAT0002417	ggo-miR-100	6	`_......`	1	85
MIMAT0002416	ppa-miR-99a	6	`_......`	1	85
MIMAT0002415	mne-miR-99a	6	`_......`	1	85
MIMAT0002414	lla-miR-99a	6	`_......`	1	85
MIMAT0002413	ppy-miR-99a	6	`_......`	1	85
MIMAT0002412	ggo-miR-99a	6	`_......`	1	85
MIMAT0002411	ptr-miR-99a	6	`_......`	1	85
MIMAT0002410	mml-miR-99a-5p	6	`_......`	1	85
MIMAT0026564	mml-miR-125b-1-3p	2	`_......`	7	85
MIMAT0031964	dre-miR-125b-2-3p	1	`_......`	6	85
MIMAT0031963	dre-miR-125b-1-3p	2	`_......`	7	85
MIMAT0001813	dre-miR-100-5p	6	`_......`	1	85
MIMAT0001812	dre-miR-99	6	`_......`	1	85
MIMAT0001498	aga-miR-100	6	`_......`	1	85
MIMAT0001228	dps-miR-100	6	`_......`	1	85
MIMAT0001178	gga-miR-100-5p	6	`_......`	1	85
MIMAT0001103	gga-miR-99a-5p	6	`_......`	1	85
MIMAT0004730	rno-miR-125b-1-3p	2	`_......`	7	85
MIMAT0000822	rno-miR-100-5p	6	`_......`	1	85
MIMAT0000820	rno-miR-99a-5p	6	`_......`	1	85
MIMAT0004669	mmu-miR-125b-1-3p	2	`_......`	7	85
MIMAT0000655	mmu-miR-100-5p	6	`_......`	1	85
MIMAT0004592	hsa-miR-125b-1-3p	2	`_......`	7	85
MIMAT0000357	dme-miR-100-5p	6	`_......`	1	85
MIMAT0000131	mmu-miR-99a-5p	6	`_......`	1	85
MIMAT0000098	hsa-miR-100-5p	6	`_......`	1	85
MIMAT0000097	hsa-miR-99a-5p	6	`_......`	1	85