RED | =100 % Complementary sequence |
. | =Identical residue |
blue alphabets | =mismatch |
_ | =Gap |
Acc number | miRNA | Start | Alignment | End | % Identity |
Query | 1 | aactgtag | 8 | ||
MIMAT0002183 | kshv-miR-K12-2-5p | 1 | ........ | 8 | 100 |
MIMAT0037052 | ssc-miR-9834-5p | 7 | ......._ | 1 | 87 |
MIMAT0036715 | oha-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0036540 | tch-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0036279 | chi-miR-582-5p | 7 | ......._ | 1 | 87 |
MIMAT0032368 | ssa-miR-144-3p | 7 | _....... | 1 | 87 |
MIMAT0032356 | ssa-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0030601 | prd-miR-7901-3p | 2 | _....... | 8 | 87 |
MIMAT0029421 | ipu-miR-144 | 7 | _....... | 1 | 87 |
MIMAT0029416 | ipu-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0028179 | dev-miR-D8-3p | 7 | ......._ | 1 | 87 |
MIMAT0026225 | ccr-miR-144 | 7 | _....... | 1 | 87 |
MIMAT0026219 | ccr-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0024840 | hvu-miR6212 | 8 | ......._ | 2 | 87 |
MIMAT0024285 | ggo-miR-508 | 1 | _....... | 7 | 87 |
MIMAT0024202 | ggo-miR-582 | 8 | ......._ | 2 | 87 |
MIMAT0024106 | ggo-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0023765 | cgr-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0026459 | hhv6b-miR-Ro6-2-3p | 8 | ......._ | 2 | 87 |
MIMAT0022803 | sha-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0022616 | ola-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0021762 | aca-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0016147 | ppy-miR-1183 | 2 | _....... | 8 | 87 |
MIMAT0016024 | ppy-miR-582-5p | 8 | ......._ | 2 | 87 |
MIMAT0015761 | ppy-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0014500 | tgu-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0013103 | eca-miR-582-5p | 8 | ......._ | 2 | 87 |
MIMAT0012983 | eca-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0012833 | rno-miR-582-5p | 7 | ......._ | 1 | 87 |
MIMAT0012744 | mdo-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0011933 | bta-miR-2384 | 1 | ......._ | 7 | 87 |
MIMAT0009916 | cfa-miR-582 | 7 | ......._ | 1 | 87 |
MIMAT0009351 | bta-miR-582 | 8 | ......._ | 2 | 87 |
MIMAT0008255 | ptr-miR-582 | 7 | ......._ | 1 | 87 |
MIMAT0007951 | ptr-miR-1183 | 2 | _....... | 8 | 87 |
MIMAT0007825 | osa-miR1872 | 2 | ......._ | 8 | 87 |
MIMAT0006443 | mml-miR-582-5p | 8 | ......._ | 2 | 87 |
MIMAT0006195 | mml-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0026799 | mml-miR-20b-3p | 2 | _....... | 8 | 87 |
MIMAT0006904 | oan-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0005828 | hsa-miR-1183 | 2 | _....... | 8 | 87 |
MIMAT0005291 | mmu-miR-582-5p | 8 | ......._ | 2 | 87 |
MIMAT0003788 | bta-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0003776 | gga-miR-144-3p | 7 | _....... | 1 | 87 |
MIMAT0003600 | xtr-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0003349 | dre-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0003247 | hsa-miR-582-5p | 8 | ......._ | 2 | 87 |
MIMAT0002473 | ppa-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0002472 | lla-miR-139 | 8 | _....... | 2 | 87 |
MIMAT0002159 | ssc-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0004752 | hsa-miR-20b-3p | 1 | _....... | 7 | 87 |
MIMAT0000845 | rno-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0000656 | mmu-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0000250 | hsa-miR-139-5p | 8 | _....... | 2 | 87 |
MIMAT0030616 | prd-miR-993-5p | 1 | .c...... | 8 | 87 |
MIMAT0029051 | gga-miR-7448-3p | 1 | ......t. | 8 | 87 |
MIMAT0036844 | oha-miR-22b | 6 | ......__ | 1 | 75 |
MIMAT0036806 | oha-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0036794 | oha-miR-199c-3p | 6 | _......_ | 1 | 75 |
MIMAT0036726 | oha-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0036696 | oha-miR-1329-5p | 6 | _......_ | 1 | 75 |
MIMAT0036653 | oha-miR-101b-3p | 6 | _......_ | 1 | 75 |
MIMAT0036651 | oha-miR-101a-3p | 7 | _......_ | 2 | 75 |
MIMAT0036641 | oha-let-7g-3p | 1 | _......_ | 6 | 75 |
MIMAT0036507 | tch-miR-101 | 7 | _......_ | 2 | 75 |
MIMAT0035966 | chi-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0035900 | chi-miR-101-3p | 6 | _......_ | 1 | 75 |
MIMAT0035771 | tae-miR396-5p | 1 | ......__ | 6 | 75 |
MIMAT0035748 | rno-miR-452-5p | 1 | ......__ | 6 | 75 |
MIMAT0035607 | dvi-miR-994-3p | 7 | ......__ | 2 | 75 |
MIMAT0034946 | efu-miR-199 | 6 | _......_ | 1 | 75 |
MIMAT0034913 | efu-miR-101 | 7 | _......_ | 2 | 75 |
MIMAT0034657 | eca-miR-9109 | 2 | ......__ | 7 | 75 |
MIMAT0034638 | eca-miR-9093 | 1 | __...... | 6 | 75 |
MIMAT0034495 | eca-miR-8961 | 7 | _......_ | 2 | 75 |
MIMAT0034375 | cfa-miR-8875 | 3 | __...... | 8 | 75 |
MIMAT0034043 | gra-miR8671 | 1 | ......__ | 6 | 75 |
MIMAT0033636 | sma-miR-96-3p | 8 | ......__ | 3 | 75 |
MIMAT0032283 | ssa-miR-101b-3p | 6 | _......_ | 1 | 75 |
MIMAT0032281 | ssa-miR-101a-3p | 6 | _......_ | 1 | 75 |
MIMAT0031569 | bbe-let-7a-3p | 2 | _......_ | 7 | 75 |
MIMAT0031546 | ppe-miR8127-5p | 2 | ......__ | 7 | 75 |
MIMAT0030750 | prd-miR-7945-5p | 2 | _......_ | 7 | 75 |
MIMAT0030477 | prd-miR-7868-3p | 1 | ......__ | 6 | 75 |
MIMAT0030137 | bdi-miR7710-5p | 8 | __...... | 3 | 75 |
MIMAT0029552 | ipu-miR-7556 | 6 | _......_ | 1 | 75 |
MIMAT0029387 | ipu-miR-101b | 6 | _......_ | 1 | 75 |
MIMAT0029386 | ipu-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0031137 | aja-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0028765 | mdo-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0028213 | hsa-miR-7151-3p | 6 | __...... | 1 | 75 |
MIMAT0026197 | ccr-miR-101b | 7 | _......_ | 2 | 75 |
MIMAT0026196 | ccr-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0027847 | mmu-miR-6972-3p | 3 | _......_ | 8 | 75 |
MIMAT0025820 | gga-miR-6710-3p | 2 | ......__ | 7 | 75 |
MIMAT0025437 | pol-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0025374 | ssc-miR-452 | 1 | ......__ | 6 | 75 |
MIMAT0025364 | ssc-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0024211 | ggo-miR-452 | 1 | ......__ | 6 | 75 |
MIMAT0023729 | cgr-miR-101b-3p | 6 | _......_ | 1 | 75 |
MIMAT0023522 | ath-miR5998b | 6 | ......__ | 1 | 75 |
MIMAT0023521 | ath-miR5998a | 6 | ......__ | 1 | 75 |
MIMAT0022811 | sha-miR-101 | 7 | _......_ | 2 | 75 |
MIMAT0022773 | sha-miR-1329 | 6 | _......_ | 1 | 75 |
MIMAT0022606 | ola-miR-101b-3p | 7 | _......_ | 2 | 75 |
MIMAT0022543 | ola-miR-101a-3p | 7 | _......_ | 2 | 75 |
MIMAT0022322 | cin-miR-5599-3p | 6 | _......_ | 1 | 75 |
MIMAT0022083 | aca-miR-5456 | 2 | __...... | 7 | 75 |
MIMAT0022013 | aca-miR-5402-3p | 3 | __...... | 8 | 75 |
MIMAT0021877 | aca-miR-216b-3p | 6 | ......__ | 1 | 75 |
MIMAT0021864 | aca-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0021772 | aca-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0021747 | aca-miR-1329-5p | 6 | _......_ | 1 | 75 |
MIMAT0021711 | aca-miR-101-3p | 6 | _......_ | 1 | 75 |
MIMAT0021395 | rmi-miR-5322 | 3 | __...... | 8 | 75 |
MIMAT0020566 | tae-miR5084 | 7 | _......_ | 2 | 75 |
MIMAT0020557 | bdi-miR5058 | 7 | ......__ | 2 | 75 |
MIMAT0020531 | ath-miR5025 | 1 | _......_ | 6 | 75 |
MIMAT0019560 | pma-miR-1329 | 6 | _......_ | 1 | 75 |
MIMAT0019496 | pma-miR-190b-3p | 1 | _......_ | 6 | 75 |
MIMAT0019475 | pma-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0018175 | mghv-miR-M1-14-3p | 8 | __...... | 3 | 75 |
MIMAT0017985 | hsa-miR-3607-3p | 1 | _......_ | 6 | 75 |
MIMAT0016932 | bta-miR-3600 | 6 | ......__ | 1 | 75 |
MIMAT0016718 | cin-miR-4124-5p | 1 | _......_ | 6 | 75 |
MIMAT0016234 | ppy-miR-1537 | 3 | ......__ | 8 | 75 |
MIMAT0015897 | ppy-miR-452 | 1 | ......__ | 6 | 75 |
MIMAT0017686 | aly-miR3433-3p | 8 | ......__ | 3 | 75 |
MIMAT0015605 | bmo-miR-3401 | 8 | _......_ | 3 | 75 |
MIMAT0015020 | hsa-miR-548v | 8 | __...... | 3 | 75 |
MIMAT0015005 | hsa-miR-3137 | 2 | __...... | 7 | 75 |
MIMAT0014596 | tgu-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0027017 | tgu-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0027008 | tgu-miR-216a-3p | 7 | ......__ | 2 | 75 |
MIMAT0014508 | tgu-miR-101-3p | 7 | _......_ | 2 | 75 |
MIMAT0014449 | tgu-miR-1329-5p | 6 | _......_ | 1 | 75 |
MIMAT0013024 | eca-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0012951 | eca-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0013742 | bmo-miR-2807b | 2 | ......__ | 7 | 75 |
MIMAT0012240 | dps-miR-994-3p | 7 | ......__ | 2 | 75 |
MIMAT0012059 | bta-miR-2469 | 3 | _......_ | 8 | 75 |
MIMAT0011871 | bta-miR-199c | 6 | _......_ | 1 | 75 |
MIMAT0010185 | ssc-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0019176 | bfl-let-7a-3p | 2 | _......_ | 7 | 75 |
MIMAT0009900 | cfa-miR-452 | 1 | ......__ | 6 | 75 |
MIMAT0009837 | cfa-miR-10b | 3 | __...... | 8 | 75 |
MIMAT0022953 | spu-miR-219-3p | 3 | ......__ | 8 | 75 |
MIMAT0009234 | bta-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0008154 | ptr-miR-452 | 1 | ......__ | 6 | 75 |
MIMAT0007893 | mdv1-miR-M31 | 8 | __...... | 3 | 75 |
MIMAT0007760 | ssc-miR-199b-3p | 6 | _......_ | 1 | 75 |
MIMAT0006734 | cfa-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0006600 | cfa-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0026913 | mml-miR-890-3p | 1 | ......__ | 6 | 75 |
MIMAT0006471 | mml-miR-625 | 3 | _......_ | 8 | 75 |
MIMAT0006336 | mml-miR-452-5p | 1 | ......__ | 6 | 75 |
MIMAT0006202 | mml-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0007686 | gga-miR-1775-3p | 3 | __...... | 8 | 75 |
MIMAT0007420 | gga-miR-1562-5p | 3 | _......_ | 8 | 75 |
MIMAT0006099 | cin-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0006046 | odi-miR-1493 | 3 | ......__ | 8 | 75 |
MIMAT0007335 | gga-miR-1457 | 8 | __...... | 3 | 75 |
MIMAT0007281 | gga-miR-1329-5p | 6 | _......_ | 1 | 75 |
MIMAT0007011 | oan-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0006903 | oan-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0006854 | oan-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0006798 | oan-miR-1329-5p | 6 | _......_ | 1 | 75 |
MIMAT0005912 | hsa-miR-548g-3p | 3 | ......__ | 8 | 75 |
MIMAT0005289 | rno-miR-881-3p | 2 | ......__ | 7 | 75 |
MIMAT0020894 | dme-miR-994-3p | 7 | ......__ | 2 | 75 |
MIMAT0004846 | mmu-miR-881-3p | 1 | ......__ | 6 | 75 |
MIMAT0004114 | mdo-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0004098 | mdo-miR-101-3p | 6 | _......_ | 1 | 75 |
MIMAT0003687 | xtr-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0003662 | xtr-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0003619 | xtr-miR-199a-3p | 6 | _......_ | 1 | 75 |
MIMAT0003750 | dre-miR-723-5p | 7 | ......__ | 2 | 75 |
MIMAT0003520 | bta-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0003446 | rlcv-miR-rL1-15-3p | 3 | __...... | 8 | 75 |
MIMAT0003040 | tni-miR-101b | 6 | _......_ | 1 | 75 |
MIMAT0003039 | fru-miR-101b | 6 | _......_ | 1 | 75 |
MIMAT0003021 | tni-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0003020 | fru-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0002903 | tni-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0002902 | fru-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0002433 | mne-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002432 | lla-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002431 | mml-miR-101-3p | 6 | _......_ | 1 | 75 |
MIMAT0002430 | ptr-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002429 | ppy-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002428 | ppa-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002427 | age-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002426 | sla-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002425 | ggo-miR-101 | 6 | _......_ | 1 | 75 |
MIMAT0002265 | ppa-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0002264 | mne-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0002263 | ppy-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0002262 | ptr-miR-144 | 6 | _......_ | 1 | 75 |
MIMAT0002068 | ptc-miR475b-3p | 7 | _......_ | 2 | 75 |
MIMAT0002067 | ptc-miR475a-3p | 7 | _......_ | 2 | 75 |
MIMAT0001841 | dre-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0001815 | dre-miR-101b | 6 | _......_ | 1 | 75 |
MIMAT0001814 | dre-miR-101a | 6 | _......_ | 1 | 75 |
MIMAT0001635 | hsa-miR-452-5p | 1 | ......__ | 6 | 75 |
MIMAT0026551 | gga-miR-20b-3p | 1 | _......_ | 6 | 75 |
MIMAT0003155 | dre-miR-199-3p | 6 | _......_ | 1 | 75 |
MIMAT0001185 | gga-miR-101-3p | 7 | _......_ | 2 | 75 |
MIMAT0003721 | gga-miR-199-3p | 6 | _......_ | 1 | 75 |
MIMAT0026504 | gga-miR-196-2-3p | 6 | __...... | 1 | 75 |
MIMAT0000850 | rno-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0000823 | rno-miR-101a-3p | 6 | _......_ | 1 | 75 |
MIMAT0000783 | rno-miR-10b-5p | 3 | __...... | 8 | 75 |
MIMAT0000616 | mmu-miR-101b-3p | 7 | _......_ | 2 | 75 |
MIMAT0000615 | rno-miR-101b-3p | 6 | _......_ | 1 | 75 |
MIMAT0000436 | hsa-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0000156 | mmu-miR-144-3p | 6 | _......_ | 1 | 75 |
MIMAT0000133 | mmu-miR-101a-3p | 6 | _......_ | 1 | 75 |
MIMAT0004519 | mmu-let-7g-3p | 1 | _......_ | 6 | 75 |
MIMAT0000099 | hsa-miR-101-3p | 6 | _......_ | 1 | 75 |