VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hsv2-miR-h23*
cgagcuu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`cgagctt`	7
MIMAT0036967	oha-miR-99b-3p	8	`.......`	2	100
MIMAT0036965	oha-miR-99a-3p	8	`.......`	2	100
MIMAT0036315	chi-miR-99b-3p	8	`.......`	2	100
MIMAT0036313	chi-miR-99a-3p	8	`.......`	2	100
MIMAT0035605	dvi-miR-993-3p	8	`.......`	2	100
MIMAT0033799	pxy-miR-6307	8	`.......`	2	100
MIMAT0032720	ssa-miR-99-2-3p	8	`.......`	2	100
MIMAT0031571	bbe-miR-100-3p	8	`.......`	2	100
MIMAT0030617	prd-miR-993-3p	8	`.......`	2	100
MIMAT0029740	cbn-miR-787	8	`.......`	2	100
MIMAT0029739	cbn-miR-231	8	`.......`	2	100
MIMAT0025014	hme-miR-6307-3p	8	`.......`	2	100
MIMAT0025000	hme-miR-993	8	`.......`	2	100
MIMAT0024017	cgr-miR-99a-3p	8	`.......`	2	100
MIMAT0023413	hco-miR-993	8	`.......`	2	100
MIMAT0022629	ola-miR-99	8	`.......`	2	100
MIMAT0023059	tur-miR-993a-3p	8	`.......`	2	100
MIMAT0023053	tur-miR-993b-3p	8	`.......`	2	100
MIMAT0021999	aca-miR-99b-3p	8	`.......`	2	100
MIMAT0021997	aca-miR-99a-3p	8	`.......`	2	100
MIMAT0021532	asu-miR-993-3p	8	`.......`	2	100
MIMAT0018441	nlo-miR-993	8	`.......`	2	100
MIMAT0018409	ngi-miR-993	8	`.......`	2	100
MIMAT0015704	nvi-miR-993	8	`.......`	2	100
MIMAT0014706	hsv2-miR-H23-3p	2	`.......`	8	100
MIMAT0014635	tgu-miR-99-3p	8	`.......`	2	100
MIMAT0014376	cqu-miR-993-3p	8	`.......`	2	100
MIMAT0014135	api-miR-993	8	`.......`	2	100
MIMAT0012709	isc-miR-993	8	`.......`	2	100
MIMAT0012676	dpu-miR-993	8	`.......`	2	100
MIMAT0012462	dsi-miR-993-3p	8	`.......`	2	100
MIMAT0012264	dps-miR-993-3p	8	`.......`	2	100
MIMAT0011718	ppc-miR-993	8	`.......`	2	100
MIMAT0011537	crm-miR-787	8	`.......`	2	100
MIMAT0011530	crm-miR-231	8	`.......`	2	100
MIMAT0010129	bmo-miR-993a-3p	8	`.......`	2	100
MIMAT0010128	bmo-miR-993b-3p	8	`.......`	2	100
MIMAT0010123	ame-miR-993	8	`.......`	2	100
MIMAT0010103	aga-miR-993	8	`.......`	2	100
MIMAT0010094	tca-miR-993-3p	8	`.......`	2	100
MIMAT0019145	bfl-miR-100-3p	8	`.......`	2	100
MIMAT0026812	mml-miR-99b-3p	7	`.......`	1	100
MIMAT0007184	oan-miR-99-3p	8	`.......`	2	100
MIMAT0005512	dme-miR-993-3p	8	`.......`	2	100
MIMAT0004288	cbr-miR-787	8	`.......`	2	100
MIMAT0004222	cel-miR-787-3p	8	`.......`	2	100
MIMAT0003831	bta-miR-423-3p	7	`.......`	1	100
MIMAT0012533	bta-miR-99a-3p	8	`.......`	2	100
MIMAT0026579	mml-miR-99a-3p	7	`.......`	1	100
MIMAT0031958	dre-miR-100-2-3p	8	`.......`	2	100
MIMAT0001293	cbr-miR-231	8	`.......`	2	100
MIMAT0006781	gga-miR-99a-3p	8	`.......`	2	100
MIMAT0004725	rno-miR-99b-3p	8	`.......`	2	100
MIMAT0004724	rno-miR-99a-3p	8	`.......`	2	100
MIMAT0004678	hsa-miR-99b-3p	8	`.......`	2	100
MIMAT0000286	cel-miR-231-3p	8	`.......`	2	100
MIMAT0004525	mmu-miR-99b-3p	8	`.......`	2	100
MIMAT0016981	mmu-miR-99a-3p	8	`.......`	2	100
MIMAT0004511	hsa-miR-99a-3p	8	`.......`	2	100
MIMAT0037272	ame-miR-9868	8	`_......`	3	85
MIMAT0037140	ata-miR390-5p	6	`_......`	1	85
MIMAT0036867	oha-miR-27b-5p	2	`_......`	7	85
MIMAT0036525	tch-miR-423-3p	6	`......_`	1	85
MIMAT0036221	chi-miR-423-3p	6	`......_`	1	85
MIMAT0036107	chi-miR-27b-5p	2	`_......`	7	85
MIMAT0035929	chi-miR-127-5p	7	`_......`	2	85
MIMAT0035840	bra-miR390-5p	6	`_......`	1	85
MIMAT0035838	bra-miR319-5p	2	`_......`	7	85
MIMAT0035688	bra-miR9564-3p	1	`......_`	6	85
MIMAT0035558	dvi-miR-1017-3p	8	`_......`	3	85
MIMAT0035555	dvi-miR-1007-3p	7	`_......`	2	85
MIMAT0035479	sly-miR390b-5p	6	`_......`	1	85
MIMAT0035467	sly-miR390a-5p	6	`_......`	1	85
MIMAT0035431	sly-miR319c-5p	2	`_......`	7	85
MIMAT0035305	gsa-miR-993-3p	8	`_......`	3	85
MIMAT0035195	efu-miR-9368	3	`......_`	8	85
MIMAT0034542	eca-miR-9002	2	`_......`	7	85
MIMAT0034384	cfa-miR-8882	3	`......_`	8	85
MIMAT0034138	gra-miR8733	1	`_......`	6	85
MIMAT0033934	atr-miR390.2	6	`_......`	1	85
MIMAT0033933	atr-miR390.1	8	`_......`	3	85
MIMAT0033892	atr-miR8603	2	`_......`	7	85
MIMAT0033124	ppc-miR-8364u-3p	8	`......_`	3	85
MIMAT0032803	cel-miR-8195-5p	3	`......_`	8	85
MIMAT0032719	ssa-miR-99-3p	7	`_......`	2	85
MIMAT0032580	ssa-miR-27c-2-5p	2	`_......`	7	85
MIMAT0032578	ssa-miR-27c-5p	2	`_......`	7	85
MIMAT0032576	ssa-miR-27b-5p	2	`_......`	7	85
MIMAT0031813	cpa-miR390b	6	`_......`	1	85
MIMAT0031812	cpa-miR390a	6	`_......`	1	85
MIMAT0031473	ppe-miR390	6	`_......`	1	85
MIMAT0031343	stu-miR390-5p	6	`_......`	1	85
MIMAT0031327	stu-miR477a-3p	7	`_......`	2	85
MIMAT0031277	stu-miR319a-5p	2	`_......`	7	85
MIMAT0030491	prd-miR-7873a-3p	7	`_......`	2	85
MIMAT0031155	ama-miR396-3p	6	`_......`	1	85
MIMAT0029324	lja-miR390b-5p	6	`_......`	1	85
MIMAT0029322	lja-miR390a-5p	6	`_......`	1	85
MIMAT0028548	mdo-miR-7286-5p	3	`_......`	8	85
MIMAT0028353	mml-miR-7196-3p	6	`......_`	1	85
MIMAT0028161	ssc-miR-7143-5p	6	`_......`	1	85
MIMAT0026135	cme-miR390c	6	`_......`	1	85
MIMAT0026134	cme-miR390a	6	`_......`	1	85
MIMAT0026133	cme-miR390d	6	`_......`	1	85
MIMAT0025974	mdm-miR390f	6	`_......`	1	85
MIMAT0025973	mdm-miR390e	6	`_......`	1	85
MIMAT0025972	mdm-miR390d	6	`_......`	1	85
MIMAT0025971	mdm-miR390c	6	`_......`	1	85
MIMAT0025970	mdm-miR390b	6	`_......`	1	85
MIMAT0025969	mdm-miR390a	6	`_......`	1	85
MIMAT0027608	hsa-miR-6854-5p	6	`_......`	1	85
MIMAT0027513	hsa-miR-6806-3p	8	`_......`	3	85
MIMAT0027493	hsa-miR-6796-3p	7	`_......`	2	85
MIMAT0025687	gga-miR-6593-3p	1	`......_`	6	85
MIMAT0025510	hex-miR390b	6	`_......`	1	85
MIMAT0025509	hex-miR390a	6	`_......`	1	85
MIMAT0025169	mmu-miR-6415	1	`_......`	6	85
MIMAT0024909	gma-miR390g	6	`_......`	1	85
MIMAT0024908	gma-miR390f	6	`_......`	1	85
MIMAT0024906	gma-miR390d	6	`_......`	1	85
MIMAT0024703	nta-miR390c	6	`_......`	1	85
MIMAT0024702	nta-miR390b	6	`_......`	1	85
MIMAT0024701	nta-miR390a	6	`_......`	1	85
MIMAT0027203	lus-miR390d	6	`_......`	1	85
MIMAT0027197	lus-miR390c	6	`_......`	1	85
MIMAT0027191	lus-miR390b	6	`_......`	1	85
MIMAT0027167	lus-miR390a	6	`_......`	1	85
MIMAT0024523	cca-miR390	6	`_......`	1	85
MIMAT0024347	mml-miR-3140	3	`_......`	8	85
MIMAT0024206	ggo-miR-590	1	`_......`	6	85
MIMAT0023957	cgr-miR-423-3p	6	`......_`	1	85
MIMAT0023876	cgr-miR-27b-5p	2	`_......`	7	85
MIMAT0023657	ame-miR-6037	7	`_......`	2	85
MIMAT0023471	hco-miR-5946c	2	`_......`	7	85
MIMAT0023179	gma-miR5775	8	`_......`	3	85
MIMAT0022544	ola-miR-27b-5p	2	`_......`	7	85
MIMAT0023034	tur-miR-276-5p	6	`......_`	1	85
MIMAT0022057	aca-miR-5436-5p	6	`......_`	1	85
MIMAT0021907	aca-miR-27b-5p	2	`_......`	7	85
MIMAT0021523	asu-miR-67-5p	6	`......_`	1	85
MIMAT0022750	cme-miR390b	6	`_......`	1	85
MIMAT0020660	bdi-miR390a-5p	6	`_......`	1	85
MIMAT0020021	sko-miR-4820	2	`_......`	7	85
MIMAT0019992	cel-miR-4808-3p	6	`_......`	1	85
MIMAT0020420	tcc-miR390b	6	`_......`	1	85
MIMAT0020419	tcc-miR390a	6	`_......`	1	85
MIMAT0019438	pma-miR-100a-3p	8	`_......`	3	85
MIMAT0019081	hsa-miR-4538	1	`_......`	6	85
MIMAT0018975	hsa-miR-4453	1	`_......`	6	85
MIMAT0027037	hsa-miR-3928-5p	8	`_......`	3	85
MIMAT0018128	pab-miR3696	1	`......_`	6	85
MIMAT0018052	vvi-miR3639-3p	1	`_......`	6	85
MIMAT0016837	cin-miR-4216-5p	6	`_......`	1	85
MIMAT0016684	cin-miR-4100-5p	2	`_......`	7	85
MIMAT0016032	ppy-miR-590-5p	1	`_......`	6	85
MIMAT0015883	ppy-miR-423-3p	6	`......_`	1	85
MIMAT0017535	aly-miR390b-5p	6	`_......`	1	85
MIMAT0017533	aly-miR390a-5p	6	`_......`	1	85
MIMAT0017431	aly-miR319b-5p	2	`_......`	7	85
MIMAT0017429	aly-miR319a-5p	2	`_......`	7	85
MIMAT0026991	tgu-miR-27-5p	2	`_......`	7	85
MIMAT0014185	rco-miR390b	6	`_......`	1	85
MIMAT0014184	rco-miR390a	6	`_......`	1	85
MIMAT0014092	csi-miR390	6	`_......`	1	85
MIMAT0014033	zma-miR390b-5p	6	`_......`	1	85
MIMAT0013998	zma-miR390a-5p	6	`_......`	1	85
MIMAT0013889	ssc-miR-27b-5p	2	`_......`	7	85
MIMAT0013881	ssc-miR-423-3p	6	`......_`	1	85
MIMAT0013058	eca-miR-590-5p	1	`_......`	6	85
MIMAT0013040	eca-miR-423-3p	6	`......_`	1	85
MIMAT0013567	cte-miR-2703-5p	2	`_......`	7	85
MIMAT0013560	cte-miR-2698	2	`_......`	7	85
MIMAT0013529	cte-miR-993	7	`_......`	2	85
MIMAT0012339	dps-miR-2541-3p	8	`_......`	3	85
MIMAT0011958	bta-miR-2401	2	`_......`	7	85
MIMAT0011568	crm-miR-72-3p	6	`......_`	1	85
MIMAT0011481	cbr-miR-1822	1	`......_`	6	85
MIMAT0011347	sbi-miR390	6	`_......`	1	85
MIMAT0011305	dre-miR-2198	6	`......_`	1	85
MIMAT0012161	sme-miR-2169-3p	8	`_......`	3	85
MIMAT0032055	dvi-miR-9b-3p	3	`_......`	8	85
MIMAT0008142	ptr-miR-423	6	`......_`	1	85
MIMAT0006450	mml-miR-590-5p	1	`_......`	6	85
MIMAT0006322	mml-miR-423-3p	6	`......_`	1	85
MIMAT0026844	mml-miR-208a-5p	1	`_......`	6	85
MIMAT0026802	mml-miR-27b-5p	2	`_......`	7	85
MIMAT0007361	gma-miR390b-5p	6	`_......`	1	85
MIMAT0007359	gma-miR390a-5p	6	`_......`	1	85
MIMAT0006069	csa-miR-1473	8	`_......`	3	85
MIMAT0006067	cin-miR-1473-3p	8	`_......`	3	85
MIMAT0006024	odi-miR-1473	8	`_......`	3	85
MIMAT0007096	oan-miR-590-5p	1	`_......`	6	85
MIMAT0006956	oan-miR-27b-5p	2	`_......`	7	85
MIMAT0005707	vvi-miR390	6	`_......`	1	85
MIMAT0005604	bna-miR390c	6	`_......`	1	85
MIMAT0005603	bna-miR390b	6	`_......`	1	85
MIMAT0005602	bna-miR390a	6	`_......`	1	85
MIMAT0017307	rno-miR-434-5p	6	`......_`	1	85
MIMAT0005313	rno-miR-423-3p	6	`......_`	1	85
MIMAT0005030	dme-miR-1017-3p	8	`_......`	3	85
MIMAT0005020	dme-miR-1007-3p	7	`_......`	2	85
MIMAT0005817	ghr-miR390c	6	`_......`	1	85
MIMAT0005816	ghr-miR390b	6	`_......`	1	85
MIMAT0005815	ghr-miR390a	6	`_......`	1	85
MIMAT0026727	mtr-miR319b-5p	1	`_......`	6	85
MIMAT0011072	mtr-miR390	6	`_......`	1	85
MIMAT0004895	mmu-miR-590-5p	1	`_......`	6	85
MIMAT0026714	mdo-miR-27b-5p	2	`_......`	7	85
MIMAT0004020	sme-miR-753a	1	`_......`	6	85
MIMAT0003454	mmu-miR-423-3p	6	`......_`	1	85
MIMAT0003258	hsa-miR-590-5p	1	`_......`	6	85
MIMAT0004325	ppt-miR319d-5p.1	1	`_......`	6	85
MIMAT0003132	ppt-miR390b	6	`_......`	1	85
MIMAT0003131	ppt-miR390a	6	`_......`	1	85
MIMAT0026570	mml-miR-127-5p	8	`_......`	3	85
MIMAT0002014	ptc-miR390d-5p	6	`_......`	1	85
MIMAT0002013	ptc-miR390c	6	`_......`	1	85
MIMAT0002012	ptc-miR390b	6	`_......`	1	85
MIMAT0002011	ptc-miR390a	6	`_......`	1	85
MIMAT0031950	dre-miR-27b-5p	2	`_......`	7	85
MIMAT0026556	mtr-miR319a-5p	2	`_......`	7	85
MIMAT0001588	osa-miR390-5p	6	`_......`	1	85
MIMAT0001340	hsa-miR-423-3p	6	`......_`	1	85
MIMAT0026547	gga-miR-27b-5p	2	`_......`	7	85
MIMAT0000932	ath-miR390b-5p	6	`_......`	1	85
MIMAT0000931	ath-miR390a-5p	6	`_......`	1	85
MIMAT0017155	rno-miR-208a-5p	1	`_......`	6	85
MIMAT0017101	rno-miR-27b-5p	2	`_......`	7	85
MIMAT0017014	mmu-miR-208a-5p	1	`_......`	6	85
MIMAT0004588	hsa-miR-27b-5p	2	`_......`	7	85
MIMAT0020829	dme-miR-9b-3p	3	`_......`	8	85
MIMAT0026474	hsa-miR-208a-5p	1	`_......`	6	85
MIMAT0004522	mmu-miR-27b-5p	2	`_......`	7	85