VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>prv-miR-11-1
cggaagac

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`cggaagac`	8
MIMAT0011230	sme-miR-2147a	1	`........`	8	100
MIMAT0036945	oha-miR-7-5p	2	`_.......`	8	87
MIMAT0036465	tch-miR-7-5p	2	`_.......`	8	87
MIMAT0036288	chi-miR-7-5p	2	`_.......`	8	87
MIMAT0035282	gsa-miR-7-5p	2	`_.......`	8	87
MIMAT0035187	efu-miR-7c	2	`_.......`	8	87
MIMAT0035004	efu-miR-7b	2	`_.......`	8	87
MIMAT0033598	sma-miR-7-5p	2	`_.......`	8	87
MIMAT0032693	ssa-miR-7a-5p	2	`_.......`	8	87
MIMAT0031843	cpa-miR8146	2	`_.......`	8	87
MIMAT0031714	bbe-miR-7-5p	2	`_.......`	8	87
MIMAT0032191	lva-miR-7-5p	2	`_.......`	8	87
MIMAT0032141	pmi-miR-7-5p	2	`_.......`	8	87
MIMAT0029527	ipu-miR-7b	2	`_.......`	8	87
MIMAT0029526	ipu-miR-7a	2	`_.......`	8	87
MIMAT0026320	ccr-miR-7b	2	`_.......`	8	87
MIMAT0026319	ccr-miR-7a	2	`_.......`	8	87
MIMAT0024984	hme-miR-7	2	`_.......`	8	87
MIMAT0024426	mse-miR-7	2	`_.......`	8	87
MIMAT0024004	cgr-miR-7b	2	`_.......`	8	87
MIMAT0023387	hco-miR-7	2	`_.......`	8	87
MIMAT0022641	ola-miR-7	2	`_.......`	8	87
MIMAT0023036	tur-miR-7-5p	2	`_.......`	8	87
MIMAT0021983	aca-miR-7-5p	2	`_.......`	8	87
MIMAT0021429	asu-miR-7-5p	2	`_.......`	8	87
MIMAT0021185	mtr-miR5224b	1	`......._`	7	87
MIMAT0020259	emu-miR-7	2	`_.......`	8	87
MIMAT0020233	egr-miR-7	2	`_.......`	8	87
MIMAT0019372	pma-miR-7b	2	`_.......`	8	87
MIMAT0019370	pma-miR-7a-5p	2	`_.......`	8	87
MIMAT0020368	cgr-miR-7a	2	`_.......`	8	87
MIMAT0018436	nlo-miR-7	2	`_.......`	8	87
MIMAT0018256	gma-miR4361	2	`......._`	8	87
MIMAT0016249	sja-miR-7-5p	2	`_.......`	8	87
MIMAT0015659	nvi-miR-7	2	`_.......`	8	87
MIMAT0014734	api-miR-7	2	`_.......`	8	87
MIMAT0014510	tgu-miR-7-5p	2	`_.......`	8	87
MIMAT0014423	cqu-miR-7	2	`_.......`	8	87
MIMAT0014290	aae-miR-7	2	`_.......`	8	87
MIMAT0014099	bma-miR-7	2	`_.......`	8	87
MIMAT0012905	eca-miR-7	2	`_.......`	8	87
MIMAT0012702	isc-miR-7	2	`_.......`	8	87
MIMAT0012666	dpu-miR-7	2	`_.......`	8	87
MIMAT0011253	sme-miR-7d-5p	2	`_.......`	8	87
MIMAT0009651	spu-miR-7	2	`_.......`	8	87
MIMAT0009608	sko-miR-7-5p	2	`_.......`	8	87
MIMAT0009560	lgi-miR-7	2	`_.......`	8	87
MIMAT0009506	cte-miR-7	2	`_.......`	8	87
MIMAT0009464	bfl-miR-7	2	`_.......`	8	87
MIMAT0009119	dya-miR-7	2	`_.......`	8	87
MIMAT0009009	dwi-miR-7	2	`_.......`	8	87
MIMAT0008931	dvi-miR-7-5p	2	`_.......`	8	87
MIMAT0008901	dsi-miR-7	2	`_.......`	8	87
MIMAT0008771	dse-miR-7	2	`_.......`	8	87
MIMAT0008742	dpe-miR-7	2	`_.......`	8	87
MIMAT0008692	dmo-miR-7	2	`_.......`	8	87
MIMAT0008622	dgr-miR-7	2	`_.......`	8	87
MIMAT0008537	der-miR-7	2	`_.......`	8	87
MIMAT0008410	dan-miR-7	2	`_.......`	8	87
MIMAT0008355	tca-miR-7-5p	2	`_.......`	8	87
MIMAT0006634	cfa-miR-7	2	`_.......`	8	87
MIMAT0006159	mml-miR-7	2	`_.......`	8	87
MIMAT0007388	gma-miR1526	2	`......._`	8	87
MIMAT0006120	csa-miR-7	2	`_.......`	8	87
MIMAT0006091	cin-miR-7-5p	2	`_.......`	8	87
MIMAT0006078	odi-miR-7	2	`_.......`	8	87
MIMAT0006986	oan-miR-7-5p	2	`_.......`	8	87
MIMAT0004086	mdo-miR-7	2	`_.......`	8	87
MIMAT0003971	sme-miR-7c-5p	2	`_.......`	8	87
MIMAT0003970	sme-miR-7b-5p	2	`_.......`	8	87
MIMAT0003969	sme-miR-7a-5p	2	`_.......`	8	87
MIMAT0003843	bta-miR-7	2	`_.......`	8	87
MIMAT0004192	bmo-miR-7-5p	2	`_.......`	8	87
MIMAT0003552	xtr-miR-7	2	`_.......`	8	87
MIMAT0003010	tni-miR-7	2	`_.......`	8	87
MIMAT0003009	fru-miR-7	2	`_.......`	8	87
MIMAT0002485	ptr-miR-7	2	`_.......`	8	87
MIMAT0002484	ppa-miR-7	2	`_.......`	8	87
MIMAT0002483	mne-miR-7	2	`_.......`	8	87
MIMAT0002482	lla-miR-7	2	`_.......`	8	87
MIMAT0002481	sla-miR-7	2	`_.......`	8	87
MIMAT0002480	ppy-miR-7	2	`_.......`	8	87
MIMAT0002479	ggo-miR-7	2	`_.......`	8	87
MIMAT0002141	ssc-miR-7	2	`_.......`	8	87
MIMAT0001523	aga-miR-7	2	`_.......`	8	87
MIMAT0001489	ame-miR-7	2	`_.......`	8	87
MIMAT0001266	dre-miR-7a	2	`_.......`	8	87
MIMAT0001265	dre-miR-7b	2	`_.......`	8	87
MIMAT0001209	dps-miR-7	2	`_.......`	8	87
MIMAT0001192	gga-miR-7b	2	`_.......`	8	87
MIMAT0001157	gga-miR-7	2	`_.......`	8	87
MIMAT0000780	rno-miR-7b	2	`_.......`	8	87
MIMAT0000678	mmu-miR-7b-5p	2	`_.......`	8	87
MIMAT0000677	mmu-miR-7a-5p	2	`_.......`	8	87
MIMAT0000606	rno-miR-7a-5p	2	`_.......`	8	87
MIMAT0000252	hsa-miR-7-5p	2	`_.......`	8	87
MIMAT0000112	dme-miR-7-5p	2	`_.......`	8	87
MIMAT0011863	bta-miR-2331-5p	8	`......c.`	1	87
MIMAT0037295	ame-miR-9890	3	`......__`	8	75
MIMAT0037031	ssc-miR-9813-5p	1	`......__`	6	75
MIMAT0035251	gsa-miR-71b-3p	7	`__......`	2	75
MIMAT0035157	efu-miR-7a	3	`_......_`	8	75
MIMAT0034852	efu-miR-9234c	7	`_......_`	2	75
MIMAT0034627	eca-miR-9082	7	`_......_`	2	75
MIMAT0034561	eca-miR-9020	3	`_......_`	8	75
MIMAT0034549	eca-miR-9009	2	`__......`	7	75
MIMAT0034298	cfa-miR-8808	3	`_......_`	8	75
MIMAT0033545	sma-miR-8420-3p	3	`_......_`	8	75
MIMAT0033253	ppc-miR-8350-3p	8	`......__`	3	75
MIMAT0033209	ppc-miR-8332-3p	2	`__......`	7	75
MIMAT0031014	hsa-miR-8087	1	`__......`	6	75
MIMAT0030738	prd-miR-7940a-5p	2	`_......_`	7	75
MIMAT0030334	hhi-miR-7790	2	`_......_`	7	75
MIMAT0030246	bdi-miR7753-5p	8	`__......`	3	75
MIMAT0030242	bdi-miR7751-5p	7	`_......_`	2	75
MIMAT0030162	bdi-miR5049-5p	8	`......__`	3	75
MIMAT0029896	mmu-miR-7685-5p	8	`......__`	3	75
MIMAT0029331	lja-miR1507b	6	`_......_`	1	75
MIMAT0029330	lja-miR1507a	6	`_......_`	1	75
MIMAT0029297	mes-miR482	6	`_......_`	1	75
MIMAT0028951	oan-miR-7404-3p	3	`__......`	8	75
MIMAT0028715	mdo-miR-7351-3p	1	`_......_`	6	75
MIMAT0028129	mmu-miR-7116-5p	2	`__......`	7	75
MIMAT0028054	mmu-miR-7074-5p	3	`_......_`	8	75
MIMAT0028041	mmu-miR-6769b-3p	8	`_......_`	3	75
MIMAT0028001	mmu-miR-7048-3p	6	`_......_`	1	75
MIMAT0027651	hsa-miR-6875-3p	8	`_......_`	3	75
MIMAT0027382	hsa-miR-6740-3p	7	`__......`	2	75
MIMAT0025808	gga-miR-6699-5p	2	`__......`	7	75
MIMAT0025783	gga-miR-6679-5p	2	`_......_`	7	75
MIMAT0025334	pde-miR482b	6	`_......_`	1	75
MIMAT0025219	ptc-miR6425e	8	`__......`	3	75
MIMAT0025214	ptc-miR6425d-5p	8	`__......`	3	75
MIMAT0025207	ptc-miR6425c-5p	8	`__......`	3	75
MIMAT0025198	ptc-miR6425b-5p	8	`__......`	3	75
MIMAT0025190	ptc-miR6425a-5p	8	`__......`	3	75
MIMAT0024598	hsa-miR-6125	2	`......__`	7	75
MIMAT0023820	cgr-miR-1903	3	`_......_`	8	75
MIMAT0023702	hsa-miR-6077	2	`_......_`	7	75
MIMAT0023588	nta-miR6021	3	`_......_`	8	75
MIMAT0022766	vun-miR482	6	`_......_`	1	75
MIMAT0023005	ath-miR5654-3p	2	`_......_`	7	75
MIMAT0022402	ath-miR5641	2	`_......_`	7	75
MIMAT0022379	mmu-miR-5625-5p	3	`......__`	8	75
MIMAT0021672	gma-miR482d-3p	6	`_......_`	1	75
MIMAT0020554	bdi-miR5056	2	`_......_`	7	75
MIMAT0020524	ath-miR5020a	2	`_......_`	7	75
MIMAT0020157	dme-miR-4947-5p	6	`......__`	1	75
MIMAT0019738	hsa-miR-4664-3p	6	`......__`	1	75
MIMAT0018480	csi-miR482a-3p	6	`_......_`	1	75
MIMAT0020952	gma-miR482b-3p	6	`_......_`	1	75
MIMAT0018861	tca-miR-3882-3p	2	`_......_`	7	75
MIMAT0018172	mghv-miR-M1-13-5p	3	`_......_`	8	75
MIMAT0018157	pab-miR482b	6	`_......_`	1	75
MIMAT0018156	pab-miR482a	6	`_......_`	1	75
MIMAT0016354	gso-miR482b	6	`_......_`	1	75
MIMAT0016353	gso-miR482a	6	`_......_`	1	75
MIMAT0016166	ppy-miR-1236	8	`_......_`	3	75
MIMAT0017760	esi-miR3454b-3p	6	`......__`	1	75
MIMAT0017754	esi-miR3454f-3p	6	`......__`	1	75
MIMAT0017727	aly-miR3446-5p	3	`......__`	8	75
MIMAT0015537	bmo-miR-3352	8	`__......`	3	75
MIMAT0014059	osa-miR2928	3	`__......`	8	75
MIMAT0014027	zma-miR482-3p	6	`_......_`	1	75
MIMAT0012821	ptr-miR-718	6	`......__`	1	75
MIMAT0012735	hsa-miR-718	6	`......__`	1	75
MIMAT0013494	mtr-miR2673b	8	`_......_`	3	75
MIMAT0013493	mtr-miR2673a	8	`_......_`	3	75
MIMAT0012518	dsi-miR-2581	2	`__......`	7	75
MIMAT0011421	sme-miR-2200-5p	2	`__......`	7	75
MIMAT0011173	pvu-miR482-3p	6	`_......_`	1	75
MIMAT0010150	mcv-miR-M1-5p	2	`_......_`	7	75
MIMAT0009939	cfa-miR-718	6	`......__`	1	75
MIMAT0009699	aqu-miR-2020-3p	1	`......__`	6	75
MIMAT0007968	ptr-miR-1236	8	`_......_`	3	75
MIMAT0026914	mml-miR-934-3p	8	`__......`	3	75
MIMAT0007364	gma-miR482a-3p	6	`_......_`	1	75
MIMAT0006014	pta-miR482c	6	`_......_`	1	75
MIMAT0005591	hsa-miR-1236-3p	8	`_......_`	3	75
MIMAT0005362	tae-miR1127a	8	`......__`	3	75
MIMAT0005495	dme-miR-979-3p	7	`_......_`	2	75
MIMAT0005003	pta-miR482b	6	`_......_`	1	75
MIMAT0005002	pta-miR482a	6	`_......_`	1	75
MIMAT0026695	mdo-miR-141-5p	7	`_......_`	2	75
MIMAT0003514	mmu-miR-718	6	`......__`	1	75
MIMAT0026561	mml-miR-141-5p	6	`_......_`	1	75
MIMAT0015215	kshv-miR-K12-2-3p	8	`_......_`	3	75
MIMAT0004598	hsa-miR-141-5p	8	`_......_`	3	75
MIMAT0004533	mmu-miR-141-5p	8	`_......_`	3	75
MIMAT0020782	dme-miR-2b-1-5p	6	`__......`	1	75