| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | ctgtatc | 7 | ||
| MIMAT0036954 | oha-miR-9-3p | 8 | ......_ | 3 | 85 |
| MIMAT0036632 | oha-let-7c-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0036402 | gma-miR9765 | 8 | ......_ | 3 | 85 |
| MIMAT0036401 | gma-miR9764 | 8 | _...... | 3 | 85 |
| MIMAT0035916 | chi-miR-1185-3p | 8 | ......_ | 3 | 85 |
| MIMAT0035304 | gsa-miR-993-5p | 3 | ......_ | 8 | 85 |
| MIMAT0034383 | cfa-miR-1185 | 8 | ......_ | 3 | 85 |
| MIMAT0034149 | gra-miR8737 | 2 | _...... | 7 | 85 |
| MIMAT0033767 | pxy-miR-8525 | 3 | ......_ | 8 | 85 |
| MIMAT0032692 | ssa-let-7a-5-3p | 8 | ......_ | 3 | 85 |
| MIMAT0032691 | ssa-let-7a-4-3p | 8 | ......_ | 3 | 85 |
| MIMAT0032271 | ssa-let-7g-3p | 8 | ......_ | 3 | 85 |
| MIMAT0031224 | stu-miR7122-5p | 8 | ......_ | 3 | 85 |
| MIMAT0030750 | prd-miR-7945-5p | 3 | ......_ | 8 | 85 |
| MIMAT0028774 | mdo-miR-7371b-5p | 3 | _...... | 8 | 85 |
| MIMAT0028381 | mml-miR-7207-3p | 3 | ......_ | 8 | 85 |
| MIMAT0026049 | mdm-miR7122b | 8 | ......_ | 3 | 85 |
| MIMAT0026048 | mdm-miR7122a | 8 | ......_ | 3 | 85 |
| MIMAT0024856 | rno-miR-6216 | 6 | _...... | 1 | 85 |
| MIMAT0024840 | hvu-miR6212 | 6 | ......_ | 1 | 85 |
| MIMAT0023062 | tur-miR-5732-5p | 6 | ......_ | 1 | 85 |
| MIMAT0021693 | aca-let-7a-3p | 8 | ......_ | 3 | 85 |
| MIMAT0020566 | tae-miR5084 | 6 | ......_ | 1 | 85 |
| MIMAT0021017 | hsa-miR-4999-5p | 3 | ......_ | 8 | 85 |
| MIMAT0020515 | dme-miR-4909-3p | 3 | _...... | 8 | 85 |
| MIMAT0019341 | mmu-miR-3963 | 1 | _...... | 6 | 85 |
| MIMAT0019289 | oar-miR-1185-3p | 8 | ......_ | 3 | 85 |
| MIMAT0018366 | far-miR1122 | 8 | _...... | 3 | 85 |
| MIMAT0018699 | tca-miR-iab-8-3p | 8 | _...... | 3 | 85 |
| MIMAT0017936 | aly-miR4247 | 1 | _...... | 6 | 85 |
| MIMAT0017836 | rno-miR-9b-3p | 6 | ......_ | 1 | 85 |
| MIMAT0016099 | ppy-miR-675b | 1 | ......_ | 6 | 85 |
| MIMAT0014547 | tgu-miR-2991 | 2 | _...... | 7 | 85 |
| MIMAT0031086 | tgu-let-7a-4-3p | 8 | ......_ | 3 | 85 |
| MIMAT0013800 | bmo-miR-2860 | 3 | ......_ | 8 | 85 |
| MIMAT0012505 | dsi-miR-iab-8-3p | 8 | _...... | 3 | 85 |
| MIMAT0012285 | dps-miR-iab-8-3p | 8 | _...... | 3 | 85 |
| MIMAT0012183 | bdi-miR1122 | 8 | _...... | 3 | 85 |
| MIMAT0011319 | mtr-miR2199 | 7 | _...... | 2 | 85 |
| MIMAT0026908 | mml-miR-675-3p | 1 | ......_ | 6 | 85 |
| MIMAT0015250 | cin-let-7d-3p | 8 | ......_ | 3 | 85 |
| MIMAT0009171 | oan-let-7f-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0007069 | oan-miR-1421l-1-3p | 1 | _...... | 6 | 85 |
| MIMAT0006898 | oan-let-7b-3p | 8 | ......_ | 3 | 85 |
| MIMAT0005357 | tae-miR1122a | 8 | _...... | 3 | 85 |
| MIMAT0005291 | mmu-miR-582-5p | 6 | ......_ | 1 | 85 |
| MIMAT0005464 | dme-miR-iab-8-3p | 7 | _...... | 2 | 85 |
| MIMAT0004883 | mmu-miR-466g | 6 | ......_ | 1 | 85 |
| MIMAT0006790 | hsa-miR-675-3p | 1 | ......_ | 6 | 85 |
| MIMAT0031040 | mdo-let-7f-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0003926 | mdv1-miR-M5-3p | 3 | _...... | 8 | 85 |
| MIMAT0015221 | bmo-let-7-3p | 1 | ......_ | 6 | 85 |
| MIMAT0003726 | mmu-miR-675-3p | 1 | ......_ | 6 | 85 |
| MIMAT0022838 | hsa-miR-1185-1-3p | 8 | ......_ | 3 | 85 |
| MIMAT0022713 | hsa-miR-1185-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0026542 | gga-let-7j-3p | 8 | ......_ | 3 | 85 |
| MIMAT0017090 | rno-let-7f-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0017017 | mmu-let-7f-2-3p | 8 | ......_ | 3 | 85 |
| MIMAT0020844 | dme-miR-318-5p | 7 | _...... | 2 | 85 |
| MIMAT0004487 | hsa-let-7f-2-3p | 8 | ......_ | 3 | 85 |
