| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gaagaacg | 8 | ||
| MIMAT0032546 | ssa-miR-22b-5p | 8 | ........ | 1 | 100 |
| MIMAT0031943 | dre-miR-22b-5p | 8 | ........ | 1 | 100 |
| MIMAT0036075 | chi-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0034438 | eca-miR-8910 | 2 | ......._ | 8 | 87 |
| MIMAT0032544 | ssa-miR-22a-5p | 8 | ......._ | 2 | 87 |
| MIMAT0025426 | pol-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0023856 | cgr-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0023573 | tca-miR-6016-5p | 2 | ......._ | 8 | 87 |
| MIMAT0022096 | aca-miR-5464-5p | 8 | _....... | 2 | 87 |
| MIMAT0021887 | aca-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0019048 | hsa-miR-4511 | 1 | ......._ | 7 | 87 |
| MIMAT0018263 | gma-miR1520j | 1 | _....... | 7 | 87 |
| MIMAT0017848 | rno-miR-3568 | 8 | ......._ | 2 | 87 |
| MIMAT0015709 | ssc-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0007287 | gga-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0006961 | oan-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0026651 | mdo-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0003826 | bta-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0003671 | xtr-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0031942 | dre-miR-22a-5p | 8 | ......._ | 2 | 87 |
| MIMAT0003152 | rno-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0004629 | mmu-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0004495 | hsa-miR-22-5p | 8 | ......._ | 2 | 87 |
| MIMAT0029013 | oan-miR-7431-3p | 1 | ......a. | 8 | 87 |
| MIMAT0021311 | mtr-miR5274a | 8 | .t...... | 1 | 87 |
| MIMAT0016257 | sja-miR-36-5p | 1 | ......t. | 8 | 87 |
| MIMAT0007868 | mmu-miR-1903 | 8 | ......g. | 1 | 87 |
| MIMAT0035766 | tae-miR9658-3p | 8 | __...... | 3 | 75 |
| MIMAT0035695 | bra-miR9563b-5p | 1 | _......_ | 6 | 75 |
| MIMAT0035484 | sly-miR477-3p | 7 | _......_ | 2 | 75 |
| MIMAT0035384 | nve-miR-9425 | 1 | _......_ | 6 | 75 |
| MIMAT0035373 | nve-miR-9417 | 3 | __...... | 8 | 75 |
| MIMAT0035372 | nve-miR-9416 | 1 | _......_ | 6 | 75 |
| MIMAT0034852 | efu-miR-9234c | 6 | ......__ | 1 | 75 |
| MIMAT0034627 | eca-miR-9082 | 6 | ......__ | 1 | 75 |
| MIMAT0034581 | eca-miR-9039 | 8 | __...... | 3 | 75 |
| MIMAT0034328 | cfa-miR-8835 | 8 | __...... | 3 | 75 |
| MIMAT0033566 | sma-miR-8431-5p | 6 | _......_ | 1 | 75 |
| MIMAT0033490 | str-miR-8398-5p | 7 | _......_ | 2 | 75 |
| MIMAT0032836 | cel-miR-8209-3p | 8 | ......__ | 3 | 75 |
| MIMAT0031651 | bbe-miR-219-3p | 1 | _......_ | 6 | 75 |
| MIMAT0031201 | stu-miR8024a-5p | 3 | ......__ | 8 | 75 |
| MIMAT0030909 | stu-miR8013 | 2 | ......__ | 7 | 75 |
| MIMAT0030384 | ptc-miR7825 | 3 | ......__ | 8 | 75 |
| MIMAT0030334 | hhi-miR-7790 | 3 | ......__ | 8 | 75 |
| MIMAT0030327 | bdi-miR7785-3p | 7 | ......__ | 2 | 75 |
| MIMAT0030155 | bdi-miR7716-3p | 8 | __...... | 3 | 75 |
| MIMAT0029888 | mmu-miR-216c-5p | 1 | ......__ | 6 | 75 |
| MIMAT0029163 | ghr-miR7510b | 1 | _......_ | 6 | 75 |
| MIMAT0028715 | mdo-miR-7351-3p | 2 | ......__ | 7 | 75 |
| MIMAT0028659 | mdo-miR-7328-3p | 2 | _......_ | 7 | 75 |
| MIMAT0028495 | mdo-miR-196a-3p | 2 | _......_ | 7 | 75 |
| MIMAT0028306 | mml-miR-4677-5p | 8 | _......_ | 3 | 75 |
| MIMAT0028091 | mmu-miR-7092-3p | 7 | _......_ | 2 | 75 |
| MIMAT0028079 | mmu-miR-7086-3p | 8 | __...... | 3 | 75 |
| MIMAT0027793 | mmu-miR-6946-3p | 7 | ......__ | 2 | 75 |
| MIMAT0027771 | mmu-miR-6935-3p | 7 | _......_ | 2 | 75 |
| MIMAT0027651 | hsa-miR-6875-3p | 7 | ......__ | 2 | 75 |
| MIMAT0025470 | hsa-miR-6507-5p | 1 | ......__ | 6 | 75 |
| MIMAT0025343 | pde-miR951 | 7 | _......_ | 2 | 75 |
| MIMAT0024870 | osa-miR5337b | 3 | __...... | 8 | 75 |
| MIMAT0022478 | hsa-miR-5687 | 3 | __...... | 8 | 75 |
| MIMAT0022402 | ath-miR5641 | 3 | ......__ | 8 | 75 |
| MIMAT0022284 | hsa-miR-5584-3p | 8 | _......_ | 3 | 75 |
| MIMAT0022082 | aca-miR-5455-3p | 8 | _......_ | 3 | 75 |
| MIMAT0022034 | aca-miR-5414 | 7 | _......_ | 2 | 75 |
| MIMAT0021833 | aca-miR-196c-3p | 3 | _......_ | 8 | 75 |
| MIMAT0020554 | bdi-miR5056 | 3 | ......__ | 8 | 75 |
| MIMAT0020524 | ath-miR5020a | 3 | ......__ | 8 | 75 |
| MIMAT0019937 | hsa-miR-4778-3p | 8 | ......__ | 3 | 75 |
| MIMAT0019760 | hsa-miR-4677-5p | 8 | _......_ | 3 | 75 |
| MIMAT0019734 | hsa-miR-4659b-3p | 7 | ......__ | 2 | 75 |
| MIMAT0019727 | hsa-miR-4659a-3p | 7 | ......__ | 2 | 75 |
| MIMAT0020967 | bcy-miR529 | 1 | ......__ | 6 | 75 |
| MIMAT0020963 | bgy-miR529 | 1 | ......__ | 6 | 75 |
| MIMAT0018264 | gma-miR4365 | 1 | _......_ | 6 | 75 |
| MIMAT0018862 | tca-miR-3883-5p | 2 | _......_ | 7 | 75 |
| MIMAT0018861 | tca-miR-3882-3p | 3 | ......__ | 8 | 75 |
| MIMAT0018740 | tca-miR-3846-5p | 7 | _......_ | 2 | 75 |
| MIMAT0018650 | tca-miR-3811d-5p | 6 | ......__ | 1 | 75 |
| MIMAT0018174 | mghv-miR-M1-14-5p | 8 | __...... | 3 | 75 |
| MIMAT0018166 | mghv-miR-M1-10-5p | 3 | _......_ | 8 | 75 |
| MIMAT0018539 | ame-miR-3765 | 1 | ......__ | 6 | 75 |
| MIMAT0018161 | pab-miR951 | 7 | _......_ | 2 | 75 |
| MIMAT0016441 | cin-miR-4000h-3p | 8 | __...... | 3 | 75 |
| MIMAT0017713 | aly-miR3441-5p.2 | 2 | ......__ | 7 | 75 |
| MIMAT0017622 | aly-miR838-3p | 8 | ......__ | 3 | 75 |
| MIMAT0017620 | aly-miR835-3p | 2 | ......__ | 7 | 75 |
| MIMAT0015435 | bmo-miR-3252 | 2 | ......__ | 7 | 75 |
| MIMAT0015065 | hsa-miR-3185 | 2 | ......__ | 7 | 75 |
| MIMAT0014998 | hsa-miR-3133 | 3 | _......_ | 8 | 75 |
| MIMAT0014659 | bmo-miR-2998 | 1 | _......_ | 6 | 75 |
| MIMAT0014052 | osa-miR2921 | 1 | _......_ | 6 | 75 |
| MIMAT0012729 | iltv-miR-I5-3p | 2 | ......__ | 7 | 75 |
| MIMAT0013688 | bmo-miR-2790-3p | 2 | _......_ | 7 | 75 |
| MIMAT0012350 | dps-miR-2545a-5p | 8 | ......__ | 3 | 75 |
| MIMAT0012040 | bta-miR-1434-3p | 1 | ......__ | 6 | 75 |
| MIMAT0011951 | bta-miR-2397-5p | 8 | __...... | 3 | 75 |
| MIMAT0010150 | mcv-miR-M1-5p | 3 | ......__ | 8 | 75 |
| MIMAT0011160 | hsa-miR-2116-5p | 7 | _......_ | 2 | 75 |
| MIMAT0032075 | dvi-miR-2b-5p | 6 | ......__ | 1 | 75 |
| MIMAT0032070 | dvi-miR-6-3-5p | 3 | __...... | 8 | 75 |
| MIMAT0032048 | dvi-miR-11-5p | 2 | _......_ | 7 | 75 |
| MIMAT0008219 | ptr-miR-548b | 2 | _......_ | 7 | 75 |
| MIMAT0007816 | osa-miR1865-3p | 2 | ......__ | 7 | 75 |
| MIMAT0006070 | csa-miR-1497 | 3 | ......__ | 8 | 75 |
| MIMAT0006068 | cin-miR-1497-3p | 3 | ......__ | 8 | 75 |
| MIMAT0006057 | odi-miR-1497h | 3 | ......__ | 8 | 75 |
| MIMAT0006056 | odi-miR-1497g | 3 | ......__ | 8 | 75 |
| MIMAT0006055 | odi-miR-1497f | 3 | ......__ | 8 | 75 |
| MIMAT0006054 | odi-miR-1497e | 3 | ......__ | 8 | 75 |
| MIMAT0006053 | odi-miR-1497d | 3 | ......__ | 8 | 75 |
| MIMAT0006052 | odi-miR-1497c | 3 | ......__ | 8 | 75 |
| MIMAT0006051 | odi-miR-1497b | 3 | ......__ | 8 | 75 |
| MIMAT0006050 | odi-miR-1497a | 3 | ......__ | 8 | 75 |
| MIMAT0005240 | smo-miR1088-5p | 3 | ......__ | 8 | 75 |
| MIMAT0005495 | dme-miR-979-3p | 6 | ......__ | 1 | 75 |
| MIMAT0005012 | pta-miR951 | 7 | _......_ | 2 | 75 |
| MIMAT0032025 | ath-miR870-5p | 1 | _......_ | 6 | 75 |
| MIMAT0004260 | ath-miR838 | 8 | ......__ | 3 | 75 |
| MIMAT0003939 | ath-miR780.2 | 6 | ......__ | 1 | 75 |
| MIMAT0003254 | hsa-miR-548b-3p | 2 | _......_ | 7 | 75 |
| MIMAT0031017 | gga-miR-196-1-3p | 2 | _......_ | 7 | 75 |
| MIMAT0020793 | dme-miR-11-5p | 2 | _......_ | 7 | 75 |
| MIMAT0020783 | dme-miR-2b-2-5p | 6 | ......__ | 1 | 75 |
