| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gaggggc | 7 | ||
| MIMAT0036220 | chi-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0035024 | efu-miR-423 | 2 | ....... | 8 | 100 |
| MIMAT0027742 | mmu-miR-6921-5p | 2 | ....... | 8 | 100 |
| MIMAT0024085 | ggo-miR-423 | 2 | ....... | 8 | 100 |
| MIMAT0023956 | cgr-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0019886 | hsa-miR-4749-3p | 8 | ....... | 2 | 100 |
| MIMAT0017856 | rno-miR-3573-5p | 2 | ....... | 8 | 100 |
| MIMAT0015882 | ppy-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0015064 | hsa-miR-3184-5p | 2 | ....... | 8 | 100 |
| MIMAT0013880 | ssc-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0013039 | eca-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0006742 | cfa-miR-423a | 2 | ....... | 8 | 100 |
| MIMAT0006321 | mml-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0017305 | rno-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0012537 | bta-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0004825 | mmu-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0003344 | sv40-miR-S1-5p | 2 | ....... | 8 | 100 |
| MIMAT0004748 | hsa-miR-423-5p | 2 | ....... | 8 | 100 |
| MIMAT0035148 | efu-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0034461 | eca-miR-185 | 2 | _...... | 7 | 85 |
| MIMAT0034082 | gra-miR8701 | 1 | _...... | 6 | 85 |
| MIMAT0033987 | gra-miR8637 | 8 | _...... | 3 | 85 |
| MIMAT0032624 | ssa-miR-365-2-5p | 1 | _...... | 6 | 85 |
| MIMAT0032330 | ssa-miR-130d-3-5p | 6 | _...... | 1 | 85 |
| MIMAT0032326 | ssa-miR-130b-2-5p | 7 | _...... | 2 | 85 |
| MIMAT0032324 | ssa-miR-130b-5p | 6 | _...... | 1 | 85 |
| MIMAT0031772 | hbv-miR-B14RC-3p | 3 | ......_ | 8 | 85 |
| MIMAT0029812 | mmu-miR-7653-5p | 3 | _...... | 8 | 85 |
| MIMAT0029358 | lja-miR7533b | 1 | ......_ | 6 | 85 |
| MIMAT0029357 | lja-miR7533a | 1 | ......_ | 6 | 85 |
| MIMAT0029335 | lja-miR7520 | 1 | ......_ | 6 | 85 |
| MIMAT0031150 | aja-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0028638 | mdo-miR-7319-5p | 6 | ......_ | 1 | 85 |
| MIMAT0028376 | mml-miR-7205-5p | 3 | ......_ | 8 | 85 |
| MIMAT0028320 | mml-miR-7184-5p | 1 | _...... | 6 | 85 |
| MIMAT0028050 | mmu-miR-7072-5p | 1 | ......_ | 6 | 85 |
| MIMAT0028046 | mmu-miR-7070-5p | 3 | ......_ | 8 | 85 |
| MIMAT0028020 | mmu-miR-7058-5p | 3 | ......_ | 8 | 85 |
| MIMAT0027945 | mmu-miR-7020-3p | 8 | ......_ | 3 | 85 |
| MIMAT0027867 | mmu-miR-6982-3p | 8 | _...... | 3 | 85 |
| MIMAT0027806 | mmu-miR-6953-5p | 2 | _...... | 7 | 85 |
| MIMAT0027754 | mmu-miR-6927-5p | 3 | ......_ | 8 | 85 |
| MIMAT0027553 | hsa-miR-6826-3p | 8 | ......_ | 3 | 85 |
| MIMAT0027526 | hsa-miR-6813-5p | 2 | _...... | 7 | 85 |
| MIMAT0027478 | hsa-miR-6789-5p | 3 | _...... | 8 | 85 |
| MIMAT0027439 | hsa-miR-6769a-3p | 8 | _...... | 3 | 85 |
| MIMAT0027387 | hsa-miR-6743-5p | 2 | _...... | 7 | 85 |
| MIMAT0027369 | hsa-miR-6734-5p | 3 | ......_ | 8 | 85 |
| MIMAT0024128 | ggo-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0023917 | cgr-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0023812 | cgr-miR-185-3p | 1 | _...... | 6 | 85 |
| MIMAT0023710 | hsa-miR-6085 | 2 | _...... | 7 | 85 |
| MIMAT0023509 | hco-miR-2159-3p | 3 | _...... | 8 | 85 |
| MIMAT0023416 | hco-miR-5930 | 2 | _...... | 7 | 85 |
| MIMAT0022119 | osa-miR5486 | 1 | _...... | 6 | 85 |
| MIMAT0022035 | aca-miR-5415 | 6 | ......_ | 1 | 85 |
| MIMAT0021308 | mtr-miR5273 | 2 | _...... | 7 | 85 |
| MIMAT0019777 | hsa-miR-4688 | 2 | _...... | 7 | 85 |
| MIMAT0019654 | pma-miR-4620 | 2 | _...... | 7 | 85 |
| MIMAT0019635 | pma-miR-4601 | 7 | _...... | 2 | 85 |
| MIMAT0018553 | ame-miR-3776 | 3 | ......_ | 8 | 85 |
| MIMAT0018129 | pab-miR3697 | 8 | _...... | 3 | 85 |
| MIMAT0016500 | cin-miR-4008c-3p | 1 | _...... | 6 | 85 |
| MIMAT0015836 | ppy-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0014846 | mmu-miR-3070-5p | 7 | _...... | 2 | 85 |
| MIMAT0013930 | ssc-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0013188 | eca-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0013624 | bmo-miR-2756-3p | 6 | ......_ | 1 | 85 |
| MIMAT0011989 | bta-miR-2422 | 3 | ......_ | 8 | 85 |
| MIMAT0011942 | bta-miR-2389 | 1 | ......_ | 6 | 85 |
| MIMAT0011857 | bta-miR-2328-5p | 8 | ......_ | 3 | 85 |
| MIMAT0009895 | cfa-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0009372 | bta-miR-760-5p | 6 | ......_ | 1 | 85 |
| MIMAT0008103 | ptr-miR-331 | 6 | _...... | 1 | 85 |
| MIMAT0006273 | mml-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0026846 | mml-miR-210-5p | 7 | _...... | 2 | 85 |
| MIMAT0026831 | mml-miR-185-3p | 1 | _...... | 6 | 85 |
| MIMAT0007637 | gga-miR-1735 | 1 | _...... | 6 | 85 |
| MIMAT0007473 | gga-miR-1607 | 1 | _...... | 6 | 85 |
| MIMAT0006874 | oan-miR-1343-5p | 1 | ......_ | 6 | 85 |
| MIMAT0005336 | rno-miR-760-5p | 6 | ......_ | 1 | 85 |
| MIMAT0012541 | mdv2-miR-M19-5p | 6 | ......_ | 1 | 85 |
| MIMAT0004339 | bta-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0003621 | xtr-miR-202-3p | 1 | _...... | 6 | 85 |
| MIMAT0017245 | mmu-miR-760-5p | 6 | ......_ | 1 | 85 |
| MIMAT0017238 | mmu-miR-665-5p | 1 | _...... | 6 | 85 |
| MIMAT0000760 | hsa-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0000571 | mmu-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0000570 | rno-miR-331-3p | 6 | _...... | 1 | 85 |
| MIMAT0004611 | hsa-miR-185-3p | 1 | _...... | 6 | 85 |
| MIMAT0026475 | hsa-miR-210-5p | 7 | _...... | 2 | 85 |
| MIMAT0016996 | mmu-miR-185-3p | 1 | _...... | 6 | 85 |
