| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | gtaaccc | 7 | ||
| MIMAT0018169 | mghv-miR-M1-11-3p | 2 | ....... | 8 | 100 |
| MIMAT0015103 | cel-miR-61-5p | 8 | ....... | 2 | 100 |
| MIMAT0036718 | oha-miR-1397-3p | 3 | ......_ | 8 | 85 |
| MIMAT0036675 | oha-miR-125b-3p | 8 | _...... | 3 | 85 |
| MIMAT0035053 | efu-miR-125a | 8 | _...... | 3 | 85 |
| MIMAT0032898 | ppc-miR-8227-5p | 3 | ......_ | 8 | 85 |
| MIMAT0032306 | ssa-miR-125a-2-3p | 8 | _...... | 3 | 85 |
| MIMAT0029652 | cbn-miR-7614 | 1 | _...... | 6 | 85 |
| MIMAT0029581 | cbr-miR-7580 | 1 | _...... | 6 | 85 |
| MIMAT0028933 | mdo-miR-7398h-3p | 1 | _...... | 6 | 85 |
| MIMAT0028887 | mdo-miR-7394a-3p | 3 | ......_ | 8 | 85 |
| MIMAT0028883 | mdo-miR-7392-3p | 1 | ......_ | 6 | 85 |
| MIMAT0028630 | mdo-miR-7315-5p | 8 | _...... | 3 | 85 |
| MIMAT0028203 | dre-miR-7146-5p | 1 | ......_ | 6 | 85 |
| MIMAT0027366 | hsa-miR-6732-3p | 1 | _...... | 6 | 85 |
| MIMAT0027341 | tgu-miR-1397-3p | 3 | ......_ | 8 | 85 |
| MIMAT0024005 | cgr-miR-872-5p | 8 | ......_ | 3 | 85 |
| MIMAT0018850 | tca-miR-3879-5p | 7 | _...... | 2 | 85 |
| MIMAT0017801 | rno-miR-3546 | 2 | _...... | 7 | 85 |
| MIMAT0014685 | tgu-miR-125-2-3p | 8 | _...... | 3 | 85 |
| MIMAT0013119 | eca-miR-872 | 8 | ......_ | 3 | 85 |
| MIMAT0007412 | gga-miR-1555-3p | 8 | _...... | 3 | 85 |
| MIMAT0007386 | gma-miR1525 | 7 | _...... | 2 | 85 |
| MIMAT0007311 | oan-miR-1421al-5p | 8 | ......_ | 3 | 85 |
| MIMAT0007200 | oan-miR-1397-3p | 3 | ......_ | 8 | 85 |
| MIMAT0007049 | oan-miR-125-3p | 8 | _...... | 3 | 85 |
| MIMAT0006967 | oan-miR-1421c-5p | 8 | ......_ | 3 | 85 |
| MIMAT0006963 | oan-miR-1421a-5p | 8 | ......_ | 3 | 85 |
| MIMAT0005282 | rno-miR-872-5p | 8 | ......_ | 3 | 85 |
| MIMAT0004934 | mmu-miR-872-5p | 8 | ......_ | 3 | 85 |
| MIMAT0031106 | mdo-miR-125b-2-3p | 8 | _...... | 3 | 85 |
| MIMAT0003933 | ath-miR774a | 8 | ......_ | 3 | 85 |
| MIMAT0026564 | mml-miR-125b-1-3p | 8 | _...... | 3 | 85 |
| MIMAT0031963 | dre-miR-125b-1-3p | 8 | _...... | 3 | 85 |
| MIMAT0003401 | dre-miR-27c-5p | 3 | _...... | 8 | 85 |
| MIMAT0004730 | rno-miR-125b-1-3p | 8 | _...... | 3 | 85 |
| MIMAT0004669 | mmu-miR-125b-1-3p | 8 | _...... | 3 | 85 |
| MIMAT0004592 | hsa-miR-125b-1-3p | 8 | _...... | 3 | 85 |
