Result for your query miRNA sequence
>mcv-miR-m1-3p
gugcugg

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1gtgctgg7
MIMAT0034460eca-miR-89322.......8100
MIMAT0034294cfa-miR-88048.......2100
MIMAT0032747ssa-miR-8160-3p7.......1100
MIMAT0029954osa-miR1437b-3p1.......7100
MIMAT0018828tca-miR-3868-5p8.......2100
MIMAT0031158hbv-miR-B20-3p1.......7100
MIMAT0011956bta-miR-24007.......1100
MIMAT0010151mcv-miR-M1-3p2.......8100
MIMAT0007240oan-miR-1419b-5p2.......8100
MIMAT0005264smo-miR11072.......8100
MIMAT0036904oha-miR-338-3p7_......285
MIMAT0036259chi-miR-497-5p8......_385
MIMAT0036150chi-miR-338-3p7_......285
MIMAT0035863bra-miR6032-3p3_......885
MIMAT0034854efu-miR-92388_......385
MIMAT0034762eca-miR-91812_......785
MIMAT0034603eca-miR-35486......_185
MIMAT0034516eca-miR-89791_......685
MIMAT0034457eca-miR-89291_......685
MIMAT0034443eca-miR-89156......_185
MIMAT0032772ath-miR81733......_885
MIMAT0032766ath-miR81683......_885
MIMAT0032615ssa-miR-338a-3p7_......285
MIMAT0030679prd-miR-7919-3p6......_185
MIMAT0029538ipu-miR-16c6_......185
MIMAT0029502ipu-miR-3387_......285
MIMAT0029098gga-miR-7472-5p3......_885
MIMAT0028819mdo-miR-7381-3p2_......785
MIMAT0028768mdo-miR-15c-5p8......_385
MIMAT0028710mdo-miR-7349-5p1_......685
MIMAT0028346mml-miR-7193-5p3......_885
MIMAT0028336mml-miR-7189-5p3......_885
MIMAT0028151ssc-miR-7138-5p8_......385
MIMAT0026303ccr-miR-457b8......_385
MIMAT0026302ccr-miR-457a8......_385
MIMAT0026291ccr-miR-3387_......285
MIMAT0028081mmu-miR-7087-3p1_......685
MIMAT0027955mmu-miR-7025-3p6......_185
MIMAT0027953mmu-miR-7024-3p6_......185
MIMAT0027643hsa-miR-6871-3p6......_185
MIMAT0025750gga-miR-6650-5p8_......385
MIMAT0025749gga-miR-6649-3p1_......685
MIMAT0025738gga-miR-6641-3p2_......785
MIMAT0025706gga-miR-6611-5p1_......685
MIMAT0025686gga-miR-6593-5p1_......685
MIMAT0025680gga-miR-6588-3p2_......785
MIMAT0025679gga-miR-6587-3p1_......685
MIMAT0025249ptc-miR64462_......785
MIMAT0027269pgi-miR6143b-3p6......_185
MIMAT0024233ggo-miR-12871_......685
MIMAT0024125ggo-miR-3387_......285
MIMAT0023918cgr-miR-3387_......285
MIMAT0023480hco-miR-59733_......885
MIMAT0022818sha-miR-3387_......285
MIMAT0022580ola-miR-338-3p7_......285
MIMAT0022273hsa-miR-5580-5p1_......685
MIMAT0021953aca-miR-383-3p8......_385
MIMAT0021938aca-miR-338-3p7_......285
MIMAT0021004gma-miR862a1_......685
MIMAT0019853hsa-miR-4731-5p1_......685
MIMAT0019595pma-miR-45631_......685
MIMAT0019590pma-miR-45581_......685
MIMAT0019069hsa-miR-45307_......285
MIMAT0018717tca-miR-316-3p6_......185
MIMAT0018121hsa-miR-3692-5p3_......885
MIMAT0018013vvi-miR3625-5p8_......385
MIMAT0017861rno-miR-35753_......885
MIMAT0017806rno-miR-35486......_185
MIMAT0016210ppy-miR-12871_......685
MIMAT0015937ppy-miR-512-3p3......_885
MIMAT0015841ppy-miR-338-3p7_......285
MIMAT0015713ssc-miR-3387_......285
MIMAT0014865mmu-miR-3078-3p2_......785
MIMAT0014542tgu-miR-338-3p7_......285
MIMAT0014456tgu-miR-29581_......685
MIMAT0013036eca-miR-338-3p7_......285
MIMAT0017369rno-miR-667-5p3......_885
MIMAT0012599bmo-miR-27236_......185
MIMAT0012458dsi-miR-1000-3p2_......785
MIMAT0012266dps-miR-1000-3p2_......785
MIMAT0012033bta-miR-24521......_685
MIMAT0010049osa-miR2092-3p7_......285
MIMAT0009971bta-miR-12871_......685
MIMAT0019141bfl-miR-31-3p3......_885
MIMAT0009292bta-miR-3387_......285
MIMAT0008291ptr-miR-6348_......385
MIMAT0008180ptr-miR-5123......_885
MIMAT0008106ptr-miR-3387_......285
MIMAT0006739cfa-miR-3387_......285
MIMAT0006372mml-miR-512-3p3......_885
MIMAT0006278mml-miR-338-3p7_......285
MIMAT0007661gga-miR-1754-5p3......_885
MIMAT0007640gga-miR-17376......_185
MIMAT0007577gga-miR-1687-3p2_......785
MIMAT0007533gga-miR-16542_......785
MIMAT0007262oan-miR-1419e-5p2_......785
MIMAT0005878hsa-miR-1287-5p1_......685
MIMAT0005158ppt-miR10453......_885
MIMAT0020900dme-miR-1000-3p2_......785
MIMAT0004967cre-miR909.11_......685
MIMAT0004250ath-miR832-5p1_......685
MIMAT0004136mdo-miR-3387_......285
MIMAT0003665xtr-miR-3387_......285
MIMAT0003660xtr-miR-93b3......_885
MIMAT0017239mmu-miR-667-5p3......_885
MIMAT0003304hsa-miR-6348_......385
MIMAT0003008tni-miR-3387_......285
MIMAT0003007fru-miR-3387_......285
MIMAT0002823hsa-miR-512-3p3......_885
MIMAT0002188kshv-miR-K12-6-5p6_......185
MIMAT0001873dre-miR-3387_......285
MIMAT0015158zma-miR172c-5p6......_185
MIMAT0015157zma-miR172b-5p6......_185
MIMAT0015156zma-miR172d-5p6......_185
MIMAT0000763hsa-miR-338-3p7_......285
MIMAT0000582mmu-miR-338-3p7_......285
MIMAT0000581rno-miR-338-3p7_......285
MIMAT0020303cel-miR-35-5p1_......685