| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | taaactgg | 8 | ||
| MIMAT0030586 | prd-miR-7897-5p | 8 | _....... | 2 | 87 |
| MIMAT0030435 | bta-miR-2285aa | 2 | _....... | 8 | 87 |
| MIMAT0029834 | mmu-miR-7664-5p | 7 | ......._ | 1 | 87 |
| MIMAT0028545 | mdo-miR-7262b-3p | 1 | _....... | 7 | 87 |
| MIMAT0024338 | mml-miR-1243-3p | 1 | _....... | 7 | 87 |
| MIMAT0022669 | ola-miR-145 | 8 | _....... | 2 | 87 |
| MIMAT0020028 | sko-miR-4823-3p | 8 | _....... | 2 | 87 |
| MIMAT0016926 | hsa-miR-4328 | 7 | _....... | 1 | 87 |
| MIMAT0015600 | bmo-miR-3396 | 8 | _....... | 2 | 87 |
| MIMAT0012211 | dme-miR-2498-3p | 1 | _....... | 7 | 87 |
| MIMAT0007502 | gga-miR-1631 | 1 | _....... | 7 | 87 |
| MIMAT0025005 | hme-miR-6301-3p | 8 | .g...... | 1 | 87 |
| MIMAT0015653 | ghr-miR3476-5p | 1 | .g...... | 8 | 87 |
| MIMAT0036780 | oha-miR-193-3p | 1 | __...... | 6 | 75 |
| MIMAT0036727 | oha-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0036584 | tch-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0036532 | tch-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0036028 | chi-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0036026 | chi-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0035967 | chi-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0035734 | rno-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0035718 | mmu-miR-935 | 7 | __...... | 2 | 75 |
| MIMAT0035534 | bdi-miR2275b | 8 | _......_ | 3 | 75 |
| MIMAT0035142 | efu-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0035122 | efu-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0034834 | efu-miR-9230b | 7 | __...... | 2 | 75 |
| MIMAT0034171 | gra-miR8747 | 8 | __...... | 3 | 75 |
| MIMAT0034002 | gra-miR8644 | 2 | ......__ | 7 | 75 |
| MIMAT0033603 | sma-miR-8446-3p | 7 | __...... | 2 | 75 |
| MIMAT0033457 | str-miR-255-3p | 1 | _......_ | 6 | 75 |
| MIMAT0033033 | ppc-miR-8270-3p | 1 | ......__ | 6 | 75 |
| MIMAT0032891 | ppc-miR-8224-3p | 1 | __...... | 6 | 75 |
| MIMAT0032862 | ppc-miR-8216-5p | 6 | __...... | 1 | 75 |
| MIMAT0032849 | ppc-miR-2251b-3p | 2 | __...... | 7 | 75 |
| MIMAT0032640 | ssa-miR-449b-3p | 6 | ......__ | 1 | 75 |
| MIMAT0032446 | ssa-miR-193-3p | 1 | __...... | 6 | 75 |
| MIMAT0032369 | ssa-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0031702 | bbe-miR-4879-5p | 1 | ......__ | 6 | 75 |
| MIMAT0031188 | stu-miR7994b-5p | 6 | ......__ | 1 | 75 |
| MIMAT0030859 | stu-miR7986 | 6 | ......__ | 1 | 75 |
| MIMAT0030761 | prd-miR-255-3p | 1 | _......_ | 6 | 75 |
| MIMAT0030434 | bta-miR-7859 | 3 | _......_ | 8 | 75 |
| MIMAT0030280 | bdi-miR7766-5p | 3 | __...... | 8 | 75 |
| MIMAT0029922 | crm-miR-255 | 1 | _......_ | 6 | 75 |
| MIMAT0029805 | mmu-miR-7651-3p | 7 | _......_ | 2 | 75 |
| MIMAT0029768 | cbn-miR-255 | 1 | _......_ | 6 | 75 |
| MIMAT0029422 | ipu-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0028653 | mdo-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0028506 | mdo-miR-7268-5p | 2 | __...... | 7 | 75 |
| MIMAT0028179 | dev-miR-D8-3p | 8 | _......_ | 3 | 75 |
| MIMAT0026251 | ccr-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0025820 | gga-miR-6710-3p | 1 | _......_ | 6 | 75 |
| MIMAT0025457 | hsa-miR-548az-3p | 3 | _......_ | 8 | 75 |
| MIMAT0025121 | mmu-miR-21b | 7 | ......__ | 2 | 75 |
| MIMAT0025116 | mmu-miR-6372 | 3 | __...... | 8 | 75 |
| MIMAT0025105 | mmu-miR-145b | 8 | __...... | 3 | 75 |
| MIMAT0024284 | ggo-miR-4738 | 3 | _......_ | 8 | 75 |
| MIMAT0024276 | ggo-miR-548e | 3 | _......_ | 8 | 75 |
| MIMAT0024174 | ggo-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0024057 | ptr-miR-548e | 3 | _......_ | 8 | 75 |
| MIMAT0023826 | cgr-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0023553 | ame-miR-6006-5p | 3 | __...... | 8 | 75 |
| MIMAT0023522 | ath-miR5998b | 7 | _......_ | 2 | 75 |
| MIMAT0023521 | ath-miR5998a | 7 | _......_ | 2 | 75 |
| MIMAT0023411 | hco-miR-255 | 1 | _......_ | 6 | 75 |
| MIMAT0023343 | hco-miR-5898-3p | 6 | _......_ | 1 | 75 |
| MIMAT0022792 | sha-miR-193 | 1 | __...... | 6 | 75 |
| MIMAT0022528 | ola-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0022304 | hsa-miR-548av-3p | 2 | _......_ | 7 | 75 |
| MIMAT0022266 | hsa-miR-548ar-3p | 3 | _......_ | 8 | 75 |
| MIMAT0021827 | aca-miR-193-3p | 1 | __...... | 6 | 75 |
| MIMAT0021773 | aca-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0021673 | gma-miR1512b | 2 | __...... | 7 | 75 |
| MIMAT0021352 | mtr-miR5286b | 3 | _......_ | 8 | 75 |
| MIMAT0021127 | hsa-miR-5195-3p | 8 | __...... | 3 | 75 |
| MIMAT0020462 | bfl-miR-4879 | 1 | ......__ | 6 | 75 |
| MIMAT0019867 | hsa-miR-4738-3p | 3 | _......_ | 8 | 75 |
| MIMAT0019476 | pma-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0018062 | dme-miR-3644-3p | 3 | ......__ | 8 | 75 |
| MIMAT0018056 | dme-miR-3641-3p | 3 | ......__ | 8 | 75 |
| MIMAT0016234 | ppy-miR-1537 | 2 | _......_ | 7 | 75 |
| MIMAT0016025 | ppy-miR-582-3p | 2 | __...... | 7 | 75 |
| MIMAT0015789 | ppy-miR-193b | 1 | __...... | 6 | 75 |
| MIMAT0015788 | ppy-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0017614 | aly-miR831-3p | 1 | ......__ | 6 | 75 |
| MIMAT0015500 | bmo-miR-3311 | 2 | __...... | 7 | 75 |
| MIMAT0015495 | bmo-miR-3307 | 3 | ......__ | 8 | 75 |
| MIMAT0014956 | mmu-miR-3112-3p | 6 | _......_ | 1 | 75 |
| MIMAT0014585 | tgu-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0013947 | ssc-miR-935 | 6 | __...... | 1 | 75 |
| MIMAT0013895 | ssc-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0013064 | eca-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0013056 | eca-miR-193b | 1 | __...... | 6 | 75 |
| MIMAT0013026 | eca-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0012845 | rno-miR-935 | 6 | __...... | 1 | 75 |
| MIMAT0011888 | bta-miR-2352 | 1 | _......_ | 6 | 75 |
| MIMAT0011830 | bta-miR-2313-3p | 6 | __...... | 1 | 75 |
| MIMAT0011797 | bta-miR-2285a | 3 | _......_ | 8 | 75 |
| MIMAT0011772 | zma-miR2275c-3p | 8 | _......_ | 3 | 75 |
| MIMAT0011770 | zma-miR2275b-3p | 8 | _......_ | 3 | 75 |
| MIMAT0012148 | sme-miR-2157-3p | 6 | _......_ | 1 | 75 |
| MIMAT0010026 | mtr-miR2086-5p | 6 | __...... | 1 | 75 |
| MIMAT0009863 | cfa-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0009779 | nve-miR-2029-3p | 3 | ......__ | 8 | 75 |
| MIMAT0009635 | sko-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0009533 | cte-miR-193 | 1 | __...... | 6 | 75 |
| MIMAT0009385 | bta-miR-935 | 6 | __...... | 1 | 75 |
| MIMAT0009253 | bta-miR-193b | 1 | __...... | 6 | 75 |
| MIMAT0008342 | ptr-miR-935 | 6 | __...... | 1 | 75 |
| MIMAT0008241 | ptr-miR-561 | 8 | ......__ | 3 | 75 |
| MIMAT0008221 | ptr-miR-548f | 3 | _......_ | 8 | 75 |
| MIMAT0008218 | ptr-miR-548a | 3 | _......_ | 8 | 75 |
| MIMAT0008059 | ptr-miR-193b | 1 | __...... | 6 | 75 |
| MIMAT0008058 | ptr-miR-193a | 1 | __...... | 6 | 75 |
| MIMAT0007766 | osa-miR1847.1 | 8 | _......_ | 3 | 75 |
| MIMAT0006444 | mml-miR-582-3p | 2 | __...... | 7 | 75 |
| MIMAT0006227 | mml-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0006226 | mml-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0007740 | gga-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0007317 | oan-miR-1422q-3p | 3 | _......_ | 8 | 75 |
| MIMAT0007141 | oan-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0007093 | oan-miR-1422j-3p | 2 | _......_ | 7 | 75 |
| MIMAT0006894 | oan-miR-1422i-3p | 2 | _......_ | 7 | 75 |
| MIMAT0006873 | oan-miR-1342 | 1 | __...... | 6 | 75 |
| MIMAT0006821 | oan-miR-193-3p | 1 | __...... | 6 | 75 |
| MIMAT0005912 | hsa-miR-548g-3p | 2 | _......_ | 7 | 75 |
| MIMAT0005895 | hsa-miR-548f-3p | 3 | _......_ | 8 | 75 |
| MIMAT0005894 | hsa-miR-1243 | 1 | __...... | 6 | 75 |
| MIMAT0005874 | hsa-miR-548e-3p | 3 | _......_ | 8 | 75 |
| MIMAT0005532 | ddi-miR-1177 | 6 | __...... | 1 | 75 |
| MIMAT0004978 | hsa-miR-935 | 6 | __...... | 1 | 75 |
| MIMAT0004859 | mmu-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0004297 | cbr-miR-255 | 1 | _......_ | 6 | 75 |
| MIMAT0004258 | ath-miR837-5p | 8 | _......_ | 3 | 75 |
| MIMAT0004123 | mdo-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0004116 | mdo-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0012105 | sme-miR-61a-5p | 6 | _......_ | 1 | 75 |
| MIMAT0003795 | bta-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0003688 | xtr-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0003616 | xtr-miR-193 | 1 | __...... | 6 | 75 |
| MIMAT0003750 | dre-miR-723-5p | 8 | _......_ | 3 | 75 |
| MIMAT0003542 | bta-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0003353 | gga-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0003251 | hsa-miR-548a-3p | 3 | _......_ | 8 | 75 |
| MIMAT0004797 | hsa-miR-582-3p | 2 | __...... | 7 | 75 |
| MIMAT0002970 | tni-miR-193 | 1 | __...... | 6 | 75 |
| MIMAT0002969 | fru-miR-193 | 1 | __...... | 6 | 75 |
| MIMAT0002819 | hsa-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0002270 | mne-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0002269 | ppy-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0002268 | ggo-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0002267 | ptr-miR-145 | 8 | __...... | 3 | 75 |
| MIMAT0002266 | mml-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0002123 | ssc-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0001857 | dre-miR-193b-3p | 1 | __...... | 6 | 75 |
| MIMAT0001856 | dre-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0001842 | dre-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0001569 | mghv-miR-M1-6-3p | 3 | _......_ | 8 | 75 |
| MIMAT0001328 | ath-miR420 | 1 | ......__ | 6 | 75 |
| MIMAT0001002 | ath-miR401 | 3 | _......_ | 8 | 75 |
| MIMAT0000868 | rno-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0000851 | rno-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0000459 | hsa-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0000437 | hsa-miR-145-5p | 8 | __...... | 3 | 75 |
| MIMAT0004216 | cel-miR-255-3p | 1 | _......_ | 6 | 75 |
| MIMAT0000223 | mmu-miR-193a-3p | 1 | __...... | 6 | 75 |
| MIMAT0000157 | mmu-miR-145a-5p | 8 | __...... | 3 | 75 |
| MIMAT0015102 | cel-miR-60-5p | 1 | __...... | 6 | 75 |
| MIMAT0020309 | cel-miR-49-5p | 8 | _......_ | 3 | 75 |
