VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>mghv-miR-m1-13-3p
uaucucau

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tatctcat`	8
MIMAT0025635	gga-miR-6565-5p	8	`........`	1	100
MIMAT0021240	mtr-miR5244	1	`........`	8	100
MIMAT0018173	mghv-miR-M1-13-3p	1	`........`	8	100
MIMAT0035619	dvi-miR-9538-3p	7	`_.......`	1	87
MIMAT0034307	cfa-miR-8817	8	`......._`	2	87
MIMAT0033889	atr-miR8600	1	`_.......`	7	87
MIMAT0030925	stu-miR1886i-5p	7	`_.......`	1	87
MIMAT0030847	stu-miR7980a	7	`_.......`	1	87
MIMAT0029588	cbr-miR-7585	7	`......._`	1	87
MIMAT0029587	cbr-miR-7584	7	`......._`	1	87
MIMAT0028931	mdo-miR-7398g-3p	1	`......._`	7	87
MIMAT0020627	mmu-miR-5119	2	`_.......`	8	87
MIMAT0017920	aly-miR3444b	1	`_.......`	7	87
MIMAT0017722	aly-miR3444a-3p	2	`_.......`	8	87
MIMAT0012875	hvt-miR-H18-3p	8	`......._`	2	87
MIMAT0012423	dsi-miR-977	7	`......._`	1	87
MIMAT0007328	gga-miR-1452	8	`......._`	2	87
MIMAT0005493	dme-miR-977-3p	7	`......._`	1	87
MIMAT0002559	ptr-miR-216a	2	`......._`	8	87
MIMAT0035410	nve-miR-9449	1	`......c.`	8	87
MIMAT0033671	sma-miR-8475-5p	1	`......c.`	8	87
MIMAT0012721	hvt-miR-H9-5p	1	`.t......`	8	87
MIMAT0037154	ata-miR9772b-5p	6	`_......_`	1	75
MIMAT0037106	ata-miR9772a-5p	6	`_......_`	1	75
MIMAT0036982	tae-miR9772	6	`_......_`	1	75
MIMAT0036833	oha-miR-216-5p	3	`_......_`	8	75
MIMAT0036724	oha-miR-143-3p	6	`_......_`	1	75
MIMAT0036716	oha-miR-139-3p	8	`......__`	3	75
MIMAT0036714	oha-miR-1388-3p	1	`_......_`	6	75
MIMAT0036476	tch-miR-143-3p	6	`_......_`	1	75
MIMAT0036339	gma-miR9724	8	`......__`	3	75
MIMAT0035964	chi-miR-143-3p	6	`_......_`	1	75
MIMAT0035959	chi-miR-1388-3p	1	`_......_`	6	75
MIMAT0035856	bra-miR400-5p	7	`__......`	2	75
MIMAT0035649	dvi-miR-977-3p	7	`......__`	2	75
MIMAT0035580	dvi-miR-958-3p	6	`_......_`	1	75
MIMAT0035291	gsa-bantam-3p	6	`_......_`	1	75
MIMAT0035255	gsa-miR-1175-3p	6	`_......_`	1	75
MIMAT0035084	efu-miR-9335	6	`_......_`	1	75
MIMAT0034635	eca-miR-9090	6	`_......_`	1	75
MIMAT0034632	eca-miR-9087	7	`_......_`	2	75
MIMAT0034615	eca-miR-9070	6	`_......_`	1	75
MIMAT0034296	cfa-miR-8806	6	`_......_`	1	75
MIMAT0033968	esi-miR8623d	1	`__......`	6	75
MIMAT0033960	esi-miR8623a	1	`__......`	6	75
MIMAT0033790	pxy-miR-8536b-3p	3	`......__`	8	75
MIMAT0033769	pxy-miR-8527	8	`__......`	3	75
MIMAT0033728	pxy-miR-8508	6	`__......`	1	75
MIMAT0033726	pxy-bantam	6	`_......_`	1	75
MIMAT0033683	sma-miR-8481-5p	8	`_......_`	3	75
MIMAT0033632	sma-miR-755-3p	6	`_......_`	1	75
MIMAT0033465	str-miR-58-3p	6	`_......_`	1	75
MIMAT0033429	str-miR-8384-3p	6	`_......_`	1	75
MIMAT0033377	str-miR-1175-3p	6	`_......_`	1	75
MIMAT0033345	str-miR-81c-3p	6	`_......_`	1	75
MIMAT0033343	str-miR-81b-3p	6	`_......_`	1	75
MIMAT0033332	str-miR-81a-3p	6	`_......_`	1	75
MIMAT0033314	str-bantam-3p	6	`_......_`	1	75
MIMAT0033140	ppc-miR-8307-5p	7	`__......`	2	75
MIMAT0033096	ppc-miR-8291-3p	3	`......__`	8	75
MIMAT0033060	ppc-miR-8364q-3p	7	`......__`	2	75
MIMAT0032906	ppc-miR-8230-5p	3	`_......_`	8	75
MIMAT0032858	ppc-miR-8214-5p	7	`_......_`	2	75
MIMAT0032518	ssa-miR-216b-5p	3	`_......_`	8	75
MIMAT0032366	ssa-miR-143-3p	6	`_......_`	1	75
MIMAT0032357	ssa-miR-139-3p	8	`......__`	3	75
MIMAT0032336	ssa-miR-1338-3p	1	`_......_`	6	75
MIMAT0031739	bma-miR-1175	6	`_......_`	1	75
MIMAT0031646	bbe-miR-216-5p	3	`_......_`	8	75
MIMAT0030689	prd-miR-81-3p	6	`_......_`	1	75
MIMAT0030561	prd-miR-58-3p	6	`_......_`	1	75
MIMAT0030553	prd-miR-7873b-3p	3	`_......_`	8	75
MIMAT0030503	prd-miR-1175-3p	6	`_......_`	1	75
MIMAT0030492	prd-miR-7874-5p	3	`_......_`	8	75
MIMAT0032259	rgl-miR7807b-3p	7	`_......_`	2	75
MIMAT0030308	bdi-miR7777-3p.2	6	`_......_`	1	75
MIMAT0030032	oar-miR-143	6	`_......_`	1	75
MIMAT0029769	cbn-miR-259	3	`_......_`	8	75
MIMAT0029694	cbn-miR-82	6	`_......_`	1	75
MIMAT0029693	cbn-miR-58a	6	`_......_`	1	75
MIMAT0029692	cbn-miR-81	6	`_......_`	1	75
MIMAT0029691	cbn-miR-80	6	`_......_`	1	75
MIMAT0029637	crm-miR-58c	6	`_......_`	1	75
MIMAT0029619	crm-miR-7602	6	`_......_`	1	75
MIMAT0029573	ipu-miR-7574	3	`......__`	8	75
MIMAT0029467	ipu-miR-216a	3	`_......_`	8	75
MIMAT0029420	ipu-miR-143	6	`_......_`	1	75
MIMAT0029415	ipu-miR-1388	1	`_......_`	6	75
MIMAT0031147	aja-miR-143	6	`_......_`	1	75
MIMAT0028984	oan-miR-7418-5p	3	`......__`	8	75
MIMAT0028969	oan-miR-7411-3p	6	`......__`	1	75
MIMAT0026224	ccr-miR-143	6	`_......_`	1	75
MIMAT0028030	mmu-miR-7063-5p	6	`__......`	1	75
MIMAT0025689	gga-miR-6595-5p	6	`_......_`	1	75
MIMAT0024930	hme-bantam	6	`_......_`	1	75
MIMAT0024837	hvu-miR6209	6	`_......_`	1	75
MIMAT0024452	mse-bantam	6	`_......_`	1	75
MIMAT0023772	cgr-miR-143	6	`_......_`	1	75
MIMAT0023484	hco-miR-5885c	6	`_......_`	1	75
MIMAT0023417	hco-miR-5885b	6	`_......_`	1	75
MIMAT0023333	hco-miR-259	3	`_......_`	8	75
MIMAT0023319	hco-miR-5885a	6	`_......_`	1	75
MIMAT0023171	gma-miR5771	1	`_......_`	6	75
MIMAT0022777	sha-miR-216a	3	`_......_`	8	75
MIMAT0022775	sha-miR-340	3	`__......`	8	75
MIMAT0022772	sha-miR-352	1	`_......_`	6	75
MIMAT0022668	ola-miR-143	6	`_......_`	1	75
MIMAT0022568	ola-miR-1388-3p	1	`_......_`	6	75
MIMAT0023104	tur-miR-5737-5p	3	`_......_`	8	75
MIMAT0022140	osa-miR5507	7	`__......`	2	75
MIMAT0022024	aca-miR-5408a-5p	2	`......__`	7	75
MIMAT0021875	aca-miR-216a	3	`_......_`	8	75
MIMAT0021770	aca-miR-143-3p	6	`_......_`	1	75
MIMAT0021763	aca-miR-139-3p	8	`......__`	3	75
MIMAT0021761	aca-miR-1388-3p	1	`_......_`	6	75
MIMAT0021674	gma-miR1513c	7	`__......`	2	75
MIMAT0021534	asu-miR-1175-3p	6	`_......_`	1	75
MIMAT0021474	asu-miR-81a	6	`_......_`	1	75
MIMAT0021422	asu-miR-81c-3p	6	`_......_`	1	75
MIMAT0021420	asu-miR-81b-3p	6	`_......_`	1	75
MIMAT0021377	isc-miR-5307	3	`_......_`	8	75
MIMAT0021309	mtr-miR2590g	8	`__......`	3	75
MIMAT0020535	ath-miR5029	7	`__......`	2	75
MIMAT0019924	hsa-miR-4770	6	`_......_`	1	75
MIMAT0019819	hsa-miR-4712-3p	7	`__......`	2	75
MIMAT0019789	hsa-miR-4695-3p	3	`_......_`	8	75
MIMAT0019607	pma-miR-4574	8	`_......_`	3	75
MIMAT0019525	pma-miR-216a-5p	3	`_......_`	8	75
MIMAT0019473	pma-miR-143-3p	6	`_......_`	1	75
MIMAT0018894	tca-miR-3896-5p	2	`......__`	7	75
MIMAT0018819	tca-miR-1175-3p	6	`_......_`	1	75
MIMAT0018736	tca-miR-3477-5p	3	`_......_`	8	75
MIMAT0018583	ame-miR-3477	3	`_......_`	8	75
MIMAT0018507	ame-miR-1175	6	`_......_`	1	75
MIMAT0018095	hsa-miR-3672	6	`__......`	1	75
MIMAT0016358	gso-miR1507b	1	`__......`	6	75
MIMAT0016357	gso-miR1507a	1	`__......`	6	75
MIMAT0016272	sja-miR-2162-5p	8	`_......_`	3	75
MIMAT0015696	nvi-bantam	6	`_......_`	1	75
MIMAT0015642	mmu-miR-3471	6	`_......_`	1	75
MIMAT0017739	ath-miR774b-5p	6	`_......_`	1	75
MIMAT0017699	aly-miR774b-5p	6	`_......_`	1	75
MIMAT0017583	aly-miR400-5p	7	`__......`	2	75
MIMAT0015624	bmo-miR-3417	8	`......__`	3	75
MIMAT0015479	bmo-miR-3292	6	`_......_`	1	75
MIMAT0015401	bmo-miR-3221	1	`__......`	6	75
MIMAT0014791	api-miR-3050	6	`_......_`	1	75
MIMAT0014594	tgu-miR-1388-3p	1	`_......_`	6	75
MIMAT0014576	tgu-miR-216a-5p	3	`_......_`	8	75
MIMAT0014440	cqu-miR-1889-5p	3	`_......_`	8	75
MIMAT0014421	cqu-bantam-3p	6	`_......_`	1	75
MIMAT0014391	cqu-miR-1175-3p	6	`_......_`	1	75
MIMAT0015371	aae-miR-1175-3p	6	`_......_`	1	75
MIMAT0014233	aae-miR-1889-5p	3	`_......_`	8	75
MIMAT0014219	aae-bantam-3p	6	`_......_`	1	75
MIMAT0014130	api-bantam	6	`_......_`	1	75
MIMAT0014093	bma-bantam	6	`_......_`	1	75
MIMAT0013879	ssc-miR-143-3p	6	`_......_`	1	75
MIMAT0013072	eca-miR-216a	3	`_......_`	8	75
MIMAT0013063	eca-miR-143	6	`_......_`	1	75
MIMAT0026936	mdo-miR-139-3p	8	`......__`	3	75
MIMAT0013613	bmo-miR-1175-3p	6	`_......_`	1	75
MIMAT0012679	isc-bantam	6	`_......_`	1	75
MIMAT0012634	dpu-bantam	6	`_......_`	1	75
MIMAT0013591	bta-miR-1388-3p	1	`_......_`	6	75
MIMAT0012446	dsi-miR-958-3p	6	`_......_`	1	75
MIMAT0012437	dsi-miR-967-5p	7	`......__`	2	75
MIMAT0012417	dps-miR-2573-3p	1	`__......`	6	75
MIMAT0012232	dps-miR-958-3p	6	`_......_`	1	75
MIMAT0011715	ppc-miR-2250	6	`_......_`	1	75
MIMAT0011656	ppc-miR-81	6	`_......_`	1	75
MIMAT0011621	crm-miR-80-3p	6	`_......_`	1	75
MIMAT0011615	crm-miR-58b-3p	6	`_......_`	1	75
MIMAT0011607	crm-miR-259	3	`_......_`	8	75
MIMAT0011570	crm-miR-81-3p	6	`_......_`	1	75
MIMAT0011539	crm-miR-82	6	`_......_`	1	75
MIMAT0011482	cbr-miR-58b	6	`_......_`	1	75
MIMAT0012169	sme-miR-753e-3p	6	`_......_`	1	75
MIMAT0011293	dre-miR-1388-3p	1	`_......_`	6	75
MIMAT0011249	sme-miR-1175-3p	6	`_......_`	1	75
MIMAT0011245	sme-miR-216-5p	3	`_......_`	8	75
MIMAT0011226	sme-miR-753b-3p	6	`_......_`	1	75
MIMAT0011178	vun-miR1507b	1	`__......`	6	75
MIMAT0010182	sma-bantam-3p	6	`_......_`	1	75
MIMAT0010177	sja-bantam	6	`_......_`	1	75
MIMAT0010099	tca-miR-304	3	`_......_`	8	75
MIMAT0010091	tca-bantam-3p	6	`_......_`	1	75
MIMAT0010089	vun-miR1507a	1	`__......`	6	75
MIMAT0010080	gma-miR1507b	1	`__......`	6	75
MIMAT0009849	cfa-miR-216a	3	`_......_`	8	75
MIMAT0009603	lgi-miR-1175-3p	6	`_......_`	1	75
MIMAT0009588	lgi-miR-216a	3	`_......_`	8	75
MIMAT0009551	cte-bantam	6	`_......_`	1	75
MIMAT0009550	cte-miR-1175-3p	6	`_......_`	1	75
MIMAT0009535	cte-miR-216a	3	`_......_`	8	75
MIMAT0009495	bfl-miR-216-5p	3	`_......_`	8	75
MIMAT0009265	bta-miR-216a	3	`_......_`	8	75
MIMAT0009233	bta-miR-143	6	`_......_`	1	75
MIMAT0009073	dya-miR-304	3	`_......_`	8	75
MIMAT0009057	dya-bantam	6	`_......_`	1	75
MIMAT0009011	dwi-miR-304	3	`_......_`	8	75
MIMAT0008985	dwi-bantam	6	`_......_`	1	75
MIMAT0008976	dvi-miR-304-5p	3	`_......_`	8	75
MIMAT0032089	dvi-miR-285-5p	8	`_......_`	3	75
MIMAT0008966	dvi-bantam-3p	6	`_......_`	1	75
MIMAT0008882	dsi-miR-304	3	`_......_`	8	75
MIMAT0008861	dsi-bantam	6	`_......_`	1	75
MIMAT0008801	dse-miR-304	3	`_......_`	8	75
MIMAT0008775	dse-bantam	6	`_......_`	1	75
MIMAT0008721	dpe-bantam	6	`_......_`	1	75
MIMAT0008657	dmo-miR-304	3	`_......_`	8	75
MIMAT0008634	dmo-bantam	6	`_......_`	1	75
MIMAT0008595	dgr-miR-304	3	`_......_`	8	75
MIMAT0008559	dgr-bantam	6	`_......_`	1	75
MIMAT0008548	der-miR-304	3	`_......_`	8	75
MIMAT0008533	der-bantam	6	`_......_`	1	75
MIMAT0008413	dan-miR-304	3	`_......_`	8	75
MIMAT0008409	dan-bantam	6	`_......_`	1	75
MIMAT0007907	bmo-bantam-3p	6	`_......_`	1	75
MIMAT0012129	ath-miR1886.2	6	`_......_`	1	75
MIMAT0006682	cfa-miR-143	6	`_......_`	1	75
MIMAT0026879	mml-miR-452-3p	3	`__......`	8	75
MIMAT0006242	mml-miR-216a-5p	3	`_......_`	8	75
MIMAT0006201	mml-miR-143-3p	6	`_......_`	1	75
MIMAT0007589	gga-miR-1697	2	`__......`	7	75
MIMAT0007365	gma-miR1507a	1	`__......`	6	75
MIMAT0006134	csa-miR-216a	3	`_......_`	8	75
MIMAT0006111	cin-miR-216	3	`_......_`	8	75
MIMAT0007229	oan-miR-1411	6	`......__`	1	75
MIMAT0007223	oan-miR-216a-5p	3	`_......_`	8	75
MIMAT0007169	oan-miR-1388-3p	1	`_......_`	6	75
MIMAT0007144	oan-miR-143-3p	6	`_......_`	1	75
MIMAT0022719	hsa-miR-1285-5p	2	`_......_`	7	75
MIMAT0005525	aga-miR-1175	6	`_......_`	1	75
MIMAT0005482	dme-miR-967-5p	7	`......__`	2	75
MIMAT0005471	dme-miR-958-3p	6	`_......_`	1	75
MIMAT0004131	mdo-miR-216	3	`_......_`	8	75
MIMAT0004113	mdo-miR-143-3p	6	`_......_`	1	75
MIMAT0012126	sme-miR-755-3p	7	`_......_`	2	75
MIMAT0004005	sme-miR-747-5p	3	`_......_`	8	75
MIMAT0012107	sme-miR-71c-3p	1	`__......`	6	75
MIMAT0012106	sme-miR-71a-1-3p	1	`__......`	6	75
MIMAT0003951	sme-bantam-c-3p	6	`_......_`	1	75
MIMAT0003950	sme-bantam-b-3p	6	`_......_`	1	75
MIMAT0003949	sme-bantam-a	6	`_......_`	1	75
MIMAT0003686	xtr-miR-143	6	`_......_`	1	75
MIMAT0003629	xtr-miR-216	3	`_......_`	8	75
MIMAT0002974	tni-miR-216a	3	`_......_`	8	75
MIMAT0002973	fru-miR-216a	3	`_......_`	8	75
MIMAT0002562	ppa-miR-216	3	`_......_`	8	75
MIMAT0002561	ppy-miR-216a	3	`_......_`	8	75
MIMAT0002560	ggo-miR-216	3	`_......_`	8	75
MIMAT0002558	lca-miR-216	3	`_......_`	8	75
MIMAT0002261	ppa-miR-143	6	`_......_`	1	75
MIMAT0002260	lla-miR-143	6	`_......_`	1	75
MIMAT0002259	ppy-miR-143	6	`_......_`	1	75
MIMAT0002258	ggo-miR-143	6	`_......_`	1	75
MIMAT0002257	ptr-miR-143	6	`_......_`	1	75
MIMAT0002130	ssc-miR-216	3	`_......_`	8	75
MIMAT0001840	dre-miR-143	6	`_......_`	1	75
MIMAT0001494	aga-bantam	6	`_......_`	1	75
MIMAT0001470	ame-bantam	6	`_......_`	1	75
MIMAT0001284	dre-miR-216a	3	`_......_`	8	75
MIMAT0001254	dps-miR-304	3	`_......_`	8	75
MIMAT0001197	dps-bantam	6	`_......_`	1	75
MIMAT0001131	gga-miR-216a	3	`_......_`	8	75
MIMAT0001001	ath-miR400	7	`__......`	2	75
MIMAT0000886	rno-miR-216a-5p	3	`_......_`	8	75
MIMAT0000849	rno-miR-143-3p	6	`_......_`	1	75
MIMAT0000662	mmu-miR-216a-5p	3	`_......_`	8	75
MIMAT0000508	cbr-miR-259	3	`_......_`	8	75
MIMAT0000489	cbr-miR-82	6	`_......_`	1	75
MIMAT0000488	cbr-miR-81	6	`_......_`	1	75
MIMAT0000487	cbr-miR-80	6	`_......_`	1	75
MIMAT0000478	cbr-miR-58a	6	`_......_`	1	75
MIMAT0000435	hsa-miR-143-3p	6	`_......_`	1	75
MIMAT0000390	dme-miR-304-5p	3	`_......_`	8	75
MIMAT0000365	dme-bantam-3p	6	`_......_`	1	75
MIMAT0020817	dme-miR-285-5p	8	`_......_`	3	75
MIMAT0000314	cel-miR-259-5p	3	`_......_`	8	75
MIMAT0015117	cel-miR-243-5p	1	`......__`	6	75
MIMAT0000273	hsa-miR-216a-5p	3	`_......_`	8	75
MIMAT0000247	mmu-miR-143-3p	6	`_......_`	1	75
MIMAT0000055	cel-miR-82-3p	6	`_......_`	1	75
MIMAT0000054	cel-miR-81-3p	6	`_......_`	1	75
MIMAT0000053	cel-miR-80-3p	6	`_......_`	1	75
MIMAT0000030	cel-miR-58a-3p	6	`_......_`	1	75