VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>rlcv-miR-rl1-19-3p
ucaccac

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`tcaccac`	7
MIMAT0036035	chi-miR-197-3p	2	`.......`	8	100
MIMAT0035355	gsa-miR-9403-3p	8	`.......`	2	100
MIMAT0035181	efu-miR-9364	1	`.......`	7	100
MIMAT0035050	efu-miR-9323	1	`.......`	7	100
MIMAT0029868	mmu-miR-7677-5p	8	`.......`	2	100
MIMAT0028559	mdo-miR-7288-3p	1	`.......`	7	100
MIMAT0028474	mdo-miR-7254-5p	1	`.......`	7	100
MIMAT0024180	ggo-miR-197	2	`.......`	8	100
MIMAT0022371	mmu-miR-5622-5p	2	`.......`	8	100
MIMAT0020710	bdi-miR166g-3p	8	`.......`	2	100
MIMAT0012959	eca-miR-197	2	`.......`	8	100
MIMAT0009257	bta-miR-197	2	`.......`	8	100
MIMAT0006698	cfa-miR-197	2	`.......`	8	100
MIMAT0006230	mml-miR-197-3p	2	`.......`	8	100
MIMAT0002604	ppa-miR-197	2	`.......`	8	100
MIMAT0002603	age-miR-197	2	`.......`	8	100
MIMAT0002602	mne-miR-197	2	`.......`	8	100
MIMAT0002601	ppy-miR-197	2	`.......`	8	100
MIMAT0002600	ptr-miR-197	2	`.......`	8	100
MIMAT0000227	hsa-miR-197-3p	2	`.......`	8	100
MIMAT0036774	oha-miR-1905	1	`_......`	6	85
MIMAT0036685	oha-miR-1306-5p	1	`_......`	6	85
MIMAT0034788	efu-miR-9202	6	`......_`	1	85
MIMAT0033868	atr-miR8583	2	`_......`	7	85
MIMAT0031624	bbe-miR-2062-3p	8	`......_`	3	85
MIMAT0031614	bbe-miR-2057-3p	8	`_......`	3	85
MIMAT0031404	mmu-miR-497b	1	`_......`	6	85
MIMAT0029089	gga-miR-7467-3p	1	`_......`	6	85
MIMAT0029004	oan-miR-7427-5p	6	`......_`	1	85
MIMAT0028006	mmu-miR-7051-5p	1	`......_`	6	85
MIMAT0027992	mmu-miR-7044-5p	8	`_......`	3	85
MIMAT0027753	mmu-miR-6926-3p	1	`......_`	6	85
MIMAT0027701	mmu-miR-6900-3p	6	`......_`	1	85
MIMAT0025848	hsa-miR-6511b-3p	3	`......_`	8	85
MIMAT0025822	gga-miR-6712-5p	7	`_......`	2	85
MIMAT0025791	gga-miR-6685-3p	6	`......_`	1	85
MIMAT0025479	hsa-miR-6511a-3p	3	`......_`	8	85
MIMAT0024559	cca-miR6108f	8	`......_`	3	85
MIMAT0022311	cel-miR-356b-5p	6	`......_`	1	85
MIMAT0022165	osa-miR5530	7	`_......`	2	85
MIMAT0020651	rgl-miR5140	8	`......_`	3	85
MIMAT0020161	dme-miR-4949-3p	7	`_......`	2	85
MIMAT0019593	pma-miR-4561	8	`......_`	3	85
MIMAT0018899	tca-miR-3897-3p	7	`_......`	2	85
MIMAT0018521	ame-miR-3751	8	`_......`	3	85
MIMAT0016851	hsa-miR-4299	8	`......_`	3	85
MIMAT0016976	cin-miR-4014-2-5p	2	`_......`	7	85
MIMAT0016348	ahy-miR3521	6	`......_`	1	85
MIMAT0016162	ppy-miR-1226	1	`......_`	6	85
MIMAT0014934	mmu-miR-3102-5p.2-5p	7	`_......`	2	85
MIMAT0014434	cqu-miR-2941-1-5p	7	`_......`	2	85
MIMAT0019187	rlcv-miR-rL1-19-3p	3	`......_`	8	85
MIMAT0013174	eca-miR-770-5p	3	`_......`	8	85
MIMAT0013122	eca-miR-876-3p	8	`_......`	3	85
MIMAT0012985	eca-miR-1905c	1	`_......`	6	85
MIMAT0012897	eca-miR-1905a	1	`_......`	6	85
MIMAT0019169	bfl-miR-2062-3p	8	`......_`	3	85
MIMAT0019136	mmu-miR-1306-5p	1	`_......`	6	85
MIMAT0007775	osa-miR1854-5p	6	`......_`	1	85
MIMAT0007665	gga-miR-1758	1	`......_`	6	85
MIMAT0007535	gga-miR-1656	1	`......_`	6	85
MIMAT0007446	gga-miR-1354	8	`......_`	3	85
MIMAT0007410	gga-miR-1553-3p	7	`_......`	2	85
MIMAT0015263	cin-miR-200-5p	1	`......_`	6	85
MIMAT0005964	osa-miR1430	6	`......_`	1	85
MIMAT0005861	mml-miR-1240	1	`......_`	6	85
MIMAT0005579	mml-miR-1226	1	`......_`	6	85
MIMAT0005578	ptr-miR-1226	1	`......_`	6	85
MIMAT0005577	hsa-miR-1226-3p	1	`......_`	6	85
MIMAT0005547	mcmv-miR-M55-1	6	`......_`	1	85
MIMAT0005338	rno-miR-770-5p	3	`_......`	8	85
MIMAT0005274	smo-miR1115-3p	1	`......_`	6	85
MIMAT0005160	ppt-miR1046-3p	6	`......_`	1	85
MIMAT0020873	dme-miR-976-5p	8	`......_`	3	85
MIMAT0004822	mmu-miR-770-5p	3	`_......`	8	85
MIMAT0003433	rlcv-miR-rL1-5-3p	3	`_......`	8	85
MIMAT0003431	rlcv-miR-rL1-4-3p	1	`_......`	6	85
MIMAT0003411	ebv-miR-BART3-3p	3	`_......`	8	85
MIMAT0001575	hcmv-miR-UL22A-3p	1	`......_`	6	85
MIMAT0020917	osa-miR169i-5p.2	6	`......_`	1	85