| RED | =100 % Complementary sequence |
| . | =Identical residue |
| blue alphabets | =mismatch |
| _ | =Gap |
| Acc number | miRNA | Start | Alignment | End | % Identity |
| Query | 1 | tctgtatc | 8 | ||
| MIMAT0035304 | gsa-miR-993-5p | 2 | ......._ | 8 | 87 |
| MIMAT0028381 | mml-miR-7207-3p | 2 | ......._ | 8 | 87 |
| MIMAT0019873 | hsa-miR-4742-3p | 1 | ......._ | 7 | 87 |
| MIMAT0011409 | sme-miR-2205-3p | 1 | ......._ | 7 | 87 |
| MIMAT0007176 | oan-miR-1390-5p | 8 | ......._ | 2 | 87 |
| MIMAT0004883 | mmu-miR-466g | 7 | ......._ | 1 | 87 |
| MIMAT0028774 | mdo-miR-7371b-5p | 1 | .t...... | 8 | 87 |
| MIMAT0024856 | rno-miR-6216 | 8 | .g...... | 1 | 87 |
| MIMAT0024798 | hvu-miR1130 | 1 | ......a. | 8 | 87 |
| MIMAT0022083 | aca-miR-5456 | 1 | ......g. | 8 | 87 |
| MIMAT0015005 | hsa-miR-3137 | 1 | ......g. | 8 | 87 |
| MIMAT0003926 | mdv1-miR-M5-3p | 1 | .g...... | 8 | 87 |
| MIMAT0036954 | oha-miR-9-3p | 8 | _......_ | 3 | 75 |
| MIMAT0036632 | oha-let-7c-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0036402 | gma-miR9765 | 8 | _......_ | 3 | 75 |
| MIMAT0036401 | gma-miR9764 | 8 | __...... | 3 | 75 |
| MIMAT0036399 | gma-miR9762 | 6 | ......__ | 1 | 75 |
| MIMAT0035916 | chi-miR-1185-3p | 8 | _......_ | 3 | 75 |
| MIMAT0035806 | tae-miR6197-5p | 1 | ......__ | 6 | 75 |
| MIMAT0034956 | efu-miR-9295 | 1 | ......__ | 6 | 75 |
| MIMAT0034892 | efu-miR-9264 | 6 | ......__ | 1 | 75 |
| MIMAT0034383 | cfa-miR-1185 | 8 | _......_ | 3 | 75 |
| MIMAT0034149 | gra-miR8737 | 2 | __...... | 7 | 75 |
| MIMAT0033767 | pxy-miR-8525 | 3 | _......_ | 8 | 75 |
| MIMAT0032692 | ssa-let-7a-5-3p | 8 | _......_ | 3 | 75 |
| MIMAT0032691 | ssa-let-7a-4-3p | 8 | _......_ | 3 | 75 |
| MIMAT0032271 | ssa-let-7g-3p | 8 | _......_ | 3 | 75 |
| MIMAT0031224 | stu-miR7122-5p | 8 | _......_ | 3 | 75 |
| MIMAT0030750 | prd-miR-7945-5p | 3 | _......_ | 8 | 75 |
| MIMAT0030481 | prd-miR-7869-3p | 3 | ......__ | 8 | 75 |
| MIMAT0029827 | mmu-miR-7660-3p | 2 | ......__ | 7 | 75 |
| MIMAT0029646 | crm-miR-254 | 6 | ......__ | 1 | 75 |
| MIMAT0028890 | mdo-miR-7396-5p | 3 | ......__ | 8 | 75 |
| MIMAT0028646 | mdo-miR-7323-5p | 7 | ......__ | 2 | 75 |
| MIMAT0028340 | mml-miR-7191-5p | 6 | ......__ | 1 | 75 |
| MIMAT0026049 | mdm-miR7122b | 8 | _......_ | 3 | 75 |
| MIMAT0026048 | mdm-miR7122a | 8 | _......_ | 3 | 75 |
| MIMAT0025735 | gga-miR-6639-5p | 6 | ......__ | 1 | 75 |
| MIMAT0025656 | gga-miR-6574-3p | 3 | ......__ | 8 | 75 |
| MIMAT0025061 | rno-miR-6322 | 3 | ......__ | 8 | 75 |
| MIMAT0024840 | hvu-miR6212 | 6 | _......_ | 1 | 75 |
| MIMAT0024343 | mml-miR-1284 | 1 | ......__ | 6 | 75 |
| MIMAT0027107 | mml-miR-1185-3p | 7 | _......_ | 2 | 75 |
| MIMAT0023324 | hco-miR-5889 | 3 | ......__ | 8 | 75 |
| MIMAT0023062 | tur-miR-5732-5p | 6 | _......_ | 1 | 75 |
| MIMAT0022472 | hsa-miR-5683 | 6 | ......__ | 1 | 75 |
| MIMAT0022013 | aca-miR-5402-3p | 2 | ......__ | 7 | 75 |
| MIMAT0021693 | aca-let-7a-3p | 8 | _......_ | 3 | 75 |
| MIMAT0021395 | rmi-miR-5322 | 2 | ......__ | 7 | 75 |
| MIMAT0020566 | tae-miR5084 | 6 | _......_ | 1 | 75 |
| MIMAT0020531 | ath-miR5025 | 2 | _......_ | 7 | 75 |
| MIMAT0021017 | hsa-miR-4999-5p | 3 | _......_ | 8 | 75 |
| MIMAT0020515 | dme-miR-4909-3p | 3 | __...... | 8 | 75 |
| MIMAT0019496 | pma-miR-190b-3p | 2 | _......_ | 7 | 75 |
| MIMAT0019341 | mmu-miR-3963 | 1 | __...... | 6 | 75 |
| MIMAT0019289 | oar-miR-1185-3p | 8 | _......_ | 3 | 75 |
| MIMAT0018366 | far-miR1122 | 8 | __...... | 3 | 75 |
| MIMAT0018699 | tca-miR-iab-8-3p | 8 | __...... | 3 | 75 |
| MIMAT0018114 | hsa-miR-3686 | 2 | ......__ | 7 | 75 |
| MIMAT0017936 | aly-miR4247 | 1 | __...... | 6 | 75 |
| MIMAT0016718 | cin-miR-4124-5p | 2 | _......_ | 7 | 75 |
| MIMAT0016654 | cin-miR-4082-3p | 3 | ......__ | 8 | 75 |
| MIMAT0016652 | cin-miR-4081-3p | 3 | ......__ | 8 | 75 |
| MIMAT0016519 | cin-miR-4014-3p | 7 | ......__ | 2 | 75 |
| MIMAT0017836 | rno-miR-9b-3p | 6 | _......_ | 1 | 75 |
| MIMAT0016099 | ppy-miR-675b | 1 | _......_ | 6 | 75 |
| MIMAT0014547 | tgu-miR-2991 | 2 | __...... | 7 | 75 |
| MIMAT0031086 | tgu-let-7a-4-3p | 8 | _......_ | 3 | 75 |
| MIMAT0014446 | cel-miR-2953-5p | 6 | ......__ | 1 | 75 |
| MIMAT0013800 | bmo-miR-2860 | 3 | _......_ | 8 | 75 |
| MIMAT0012505 | dsi-miR-iab-8-3p | 8 | __...... | 3 | 75 |
| MIMAT0012335 | dps-miR-2539-3p | 7 | _......_ | 2 | 75 |
| MIMAT0012285 | dps-miR-iab-8-3p | 8 | __...... | 3 | 75 |
| MIMAT0012183 | bdi-miR1122 | 8 | __...... | 3 | 75 |
| MIMAT0011789 | dme-miR-2281-3p | 3 | ......__ | 8 | 75 |
| MIMAT0011319 | mtr-miR2199 | 7 | __...... | 2 | 75 |
| MIMAT0026908 | mml-miR-675-3p | 1 | _......_ | 6 | 75 |
| MIMAT0015250 | cin-let-7d-3p | 8 | _......_ | 3 | 75 |
| MIMAT0009171 | oan-let-7f-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0007069 | oan-miR-1421l-1-3p | 1 | __...... | 6 | 75 |
| MIMAT0006898 | oan-let-7b-3p | 8 | _......_ | 3 | 75 |
| MIMAT0005357 | tae-miR1122a | 8 | __...... | 3 | 75 |
| MIMAT0005291 | mmu-miR-582-5p | 6 | _......_ | 1 | 75 |
| MIMAT0005239 | smo-miR1087 | 6 | ......__ | 1 | 75 |
| MIMAT0005464 | dme-miR-iab-8-3p | 7 | __...... | 2 | 75 |
| MIMAT0006790 | hsa-miR-675-3p | 1 | _......_ | 6 | 75 |
| MIMAT0031040 | mdo-let-7f-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0015221 | bmo-let-7-3p | 1 | _......_ | 6 | 75 |
| MIMAT0003726 | mmu-miR-675-3p | 1 | _......_ | 6 | 75 |
| MIMAT0022838 | hsa-miR-1185-1-3p | 8 | _......_ | 3 | 75 |
| MIMAT0022713 | hsa-miR-1185-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0002070 | ptc-miR475d-3p | 7 | ......__ | 2 | 75 |
| MIMAT0026542 | gga-let-7j-3p | 8 | _......_ | 3 | 75 |
| MIMAT0017090 | rno-let-7f-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0017017 | mmu-let-7f-2-3p | 8 | _......_ | 3 | 75 |
| MIMAT0020844 | dme-miR-318-5p | 7 | __...... | 2 | 75 |
| MIMAT0031891 | cel-miR-254-5p | 6 | ......__ | 1 | 75 |
| MIMAT0004487 | hsa-let-7f-2-3p | 8 | _......_ | 3 | 75 |
