Result for your query miRNA sequence
>mdv1-miR-m1*
ugcugcgc

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tgctgcgc8
MIMAT0005801mdv1-miR-M1-3p1........8100
MIMAT0036336ocu-miR-191-3p1_.......787
MIMAT0034906efu-miR-1911_.......787
MIMAT0015502bmo-miR-33148......._287
MIMAT0011215mmu-miR-21392_.......887
MIMAT0006481mml-miR-6398_.......287
MIMAT0026834mml-miR-191-3p1_.......787
MIMAT0006980oan-miR-1421i-1-3p1......._787
MIMAT0001618hsa-miR-191-3p1_.......787
MIMAT0020839dme-miR-313-5p1......._787
MIMAT0034692eca-miR-91401......a.887
MIMAT0034588eca-miR-90458......t.187
MIMAT0015432bmo-miR-32508......a.187
MIMAT0007876mmu-miR-19078......t.187
MIMAT0007401hsa-miR-15391.c......887
MIMAT0037148ata-miR172b-5p6......__175
MIMAT0036746oha-miR-16b-5p8......__375
MIMAT0036744oha-miR-16a-5p8......__375
MIMAT0036742oha-miR-15b-5p8......__375
MIMAT0036740oha-miR-15a-5p8......__375
MIMAT0036659oha-miR-103b-3p7......__275
MIMAT0036657oha-miR-103a-3p7......__275
MIMAT0036655oha-miR-107-3p7......__275
MIMAT0036643oha-let-7i-3p1__......675
MIMAT0036561tch-miR-15a-5p8......__375
MIMAT0036558tch-miR-497-5p8......__375
MIMAT0036552tch-miR-15b-5p8......__375
MIMAT0036549tch-miR-195-5p8......__375
MIMAT0036508tch-miR-1077......__275
MIMAT0036495tch-miR-424-5p8......__375
MIMAT0036480tch-miR-103a-3p7......__275
MIMAT0036259chi-miR-497-5p7......__275
MIMAT0036222chi-miR-424-5p8......__375
MIMAT0036030chi-miR-195-5p8......__375
MIMAT0036023chi-miR-191-3p1__......675
MIMAT0035996chi-miR-16b-5p8......__375
MIMAT0035994chi-miR-16a-5p8......__375
MIMAT0035992chi-miR-15b-5p8......__375
MIMAT0035990chi-miR-15a-5p8......__375
MIMAT0035910chi-miR-107-3p7......__275
MIMAT0035902chi-miR-103-3p7......__275
MIMAT0035895chi-let-7i-3p1__......675
MIMAT0035876bra-miR172d-5p6......__175
MIMAT0035728rno-miR-15a-5p8......__375
MIMAT0035565dvi-miR-252-3p3......__875
MIMAT0035409nve-miR-94488_......_375
MIMAT0035188efu-miR-158......__375
MIMAT0035138efu-miR-93521......__675
MIMAT0035126efu-miR-4248......__375
MIMAT0035087efu-miR-168......__375
MIMAT0035083efu-miR-103b7......__275
MIMAT0035011efu-miR-103a7......__275
MIMAT0034987efu-miR-4978......__375
MIMAT0034954efu-miR-1077......__275
MIMAT0034861efu-miR-92452......__775
MIMAT0034776efu-miR-91961......__675
MIMAT0034562eca-miR-90212......__775
MIMAT0034547eca-miR-90071......__675
MIMAT0034141gra-miR172b6......__175
MIMAT0033717pxy-miR-2a-5p6......__175
MIMAT0033589sma-miR-745-3p1......__675
MIMAT0033355str-miR-86-3p3......__875
MIMAT0033234ppc-miR-8344-5p1_......_675
MIMAT0032410ssa-miR-16c-5p8......__375
MIMAT0032408ssa-miR-16b-5p8......__375
MIMAT0032405ssa-miR-16a-5p8......__375
MIMAT0032403ssa-miR-15e-5p8......__375
MIMAT0032401ssa-miR-15d-5p8......__375
MIMAT0032396ssa-miR-15b-5p8......__375
MIMAT0032291ssa-miR-107-3p7......__275
MIMAT0032285ssa-miR-103-3p7......__275
MIMAT0032276ssa-let-7i-2-3p1__......675
MIMAT0032275ssa-let-7i-3p1__......675
MIMAT0031658bbe-miR-252b-3p3__......875
MIMAT0031632bbe-miR-2067-3p8......__375
MIMAT0031630bbe-miR-2066-5p8......__375
MIMAT0031629bbe-miR-2066-3p3......__875
MIMAT0031628bbe-miR-2064-5p8......__375
MIMAT0031611bbe-miR-2013-3p7......__275
MIMAT0031286stu-miR172b-5p6......__175
MIMAT0030886stu-miR7997b2......__775
MIMAT0030885stu-miR7997a2......__775
MIMAT0030366hhi-miR-15a8......__375
MIMAT0030311bdi-miR7778-3p1__......675
MIMAT0030036oar-miR-16b8......__375
MIMAT0030029oar-miR-1077......__275
MIMAT0030027oar-miR-1037......__275
MIMAT0032234lva-miR-2013-3p7......__275
MIMAT0032188pmi-miR-2013-3p7......__275
MIMAT0029577ipu-miR-457b8......__375
MIMAT0029515ipu-miR-457a8......__375
MIMAT0029432ipu-miR-16b8......__375
MIMAT0029431ipu-miR-15b8......__375
MIMAT0029430ipu-miR-15a8......__375
MIMAT0029390ipu-miR-107b7......__275
MIMAT0029389ipu-miR-107a7......__275
MIMAT0029388ipu-miR-1037......__275
MIMAT0031151aja-let-7i1__......675
MIMAT0028793mdo-miR-7373a-3p3......__875
MIMAT0028768mdo-miR-15c-5p7......__275
MIMAT0028575mdo-miR-7295-3p3__......875
MIMAT0026303ccr-miR-457b7......__275
MIMAT0026302ccr-miR-457a7......__275
MIMAT0026235ccr-miR-16c8......__375
MIMAT0026234ccr-miR-16b8......__375
MIMAT0026233ccr-miR-16a8......__375
MIMAT0026232ccr-miR-15b8......__375
MIMAT0026228ccr-miR-15a8......__375
MIMAT0026199ccr-miR-1077......__275
MIMAT0026198ccr-miR-1037......__275
MIMAT0027665hsa-miR-6882-3p1......__675
MIMAT0027578hsa-miR-6838-5p8......__375
MIMAT0025789gga-miR-6684-5p3......__875
MIMAT0025693gga-miR-6598-5p7......__275
MIMAT0025677gga-miR-6586-5p1......__675
MIMAT0025175mmu-miR-64198......__375
MIMAT0025096mmu-miR-63538......__375
MIMAT0025085mmu-miR-63428......__375
MIMAT0025076mmu-miR-195b8......__375
MIMAT0027234lus-miR172j6......__175
MIMAT0024151ggo-miR-4248......__375
MIMAT0024143ggo-miR-4978......__375
MIMAT0023970cgr-miR-497-5p8......__375
MIMAT0023907cgr-miR-322-5p8......__375
MIMAT0023829cgr-miR-1958......__375
MIMAT0023823cgr-miR-191-3p1__......675
MIMAT0023793cgr-miR-16-5p8......__375
MIMAT0023791cgr-miR-15b-5p8......__375
MIMAT0023789cgr-miR-15a-5p8......__375
MIMAT0023734cgr-miR-1077......__275
MIMAT0023731cgr-miR-103-3p7......__275
MIMAT0023724cgr-let-7i1__......675
MIMAT0022821sha-miR-4978......__375
MIMAT0022650ola-miR-15a8......__375
MIMAT0022632ola-miR-1077......__275
MIMAT0022613ola-miR-168......__375
MIMAT0022593ola-miR-1037......__275
MIMAT0022448meu-miR-16c8......__375
MIMAT0022447meu-miR-15c8......__375
MIMAT0021978aca-miR-497-5p8......__375
MIMAT0021967aca-miR-457-5p8......__375
MIMAT0021888aca-miR-22-3p3_......_875
MIMAT0021801aca-miR-16b-5p8......__375
MIMAT0021799aca-miR-16a-5p8......__375
MIMAT0021792aca-miR-15a-5p8......__375
MIMAT0021790aca-miR-15b-5p8......__375
MIMAT0021716aca-miR-103-3p7......__275
MIMAT0021714aca-miR-107-3p7......__275
MIMAT0021708aca-let-7i-3p1__......675
MIMAT0021660gma-miR172j6......__175
MIMAT0021659gma-miR172i-5p6......__175
MIMAT0021657gma-miR172h-5p6......__175
MIMAT0021656gma-miR172g6......__175
MIMAT0027061bdi-miR172a-5p6......__175
MIMAT0020549hvu-miR50536_......_175
MIMAT0020273emu-miR-7451......__675
MIMAT0020248egr-miR-7451......__675
MIMAT0020119xbo-miR-20137......__275
MIMAT0019859hsa-miR-47341_......_675
MIMAT0019577pma-miR-45467......__275
MIMAT0019556pma-miR-497-5p8......__375
MIMAT0019443pma-miR-103b-3p7......__275
MIMAT0019441pma-miR-103a7......__275
MIMAT0019381pma-miR-16-5p8......__375
MIMAT0019380pma-miR-15b8......__375
MIMAT0019379pma-miR-15a8......__375
MIMAT0018503hvu-miR444a2......__775
MIMAT0018226tae-miR444b2......__775
MIMAT0018805tca-miR-252a-3p3......__875
MIMAT0018657tca-miR-3816-3p2......__775
MIMAT0016862hsa-miR-43106......__175
MIMAT0016690cin-miR-4103-3p3_......_875
MIMAT0016606cin-miR-4059-5p8......__375
MIMAT0016397cin-miR-15-5p8......__375
MIMAT0016373gga-miR-35238__......375
MIMAT0016228ppy-miR-13223......__875
MIMAT0016132ppy-miR-9226......__175
MIMAT0016046ppy-miR-6043_......_875
MIMAT0015918ppy-miR-4978......__375
MIMAT0015884ppy-miR-4248......__375
MIMAT0015790ppy-miR-1958......__375
MIMAT0017529aly-miR172e-5p6......__175
MIMAT0017523aly-miR172b-5p6......__175
MIMAT0015570bmo-miR-3378-3p2......__775
MIMAT0014708hsv2-miR-H251__......675
MIMAT0014664bmo-miR-30001__......675
MIMAT0014619tgu-miR-15c-5p8......__375
MIMAT0014597tgu-miR-15b-5p8......__375
MIMAT0014588tgu-miR-16b-5p8......__375
MIMAT0014586tgu-miR-16c8......__375
MIMAT0014583tgu-miR-16a-5p8......__375
MIMAT0014556tgu-miR-1077......__275
MIMAT0014555tgu-miR-15a-5p8......__375
MIMAT0014523tgu-miR-103-3p7......__275
MIMAT0026974tgu-let-7i-3p1__......675
MIMAT0014374cqu-miR-252-3p3......__875
MIMAT0014217aae-miR-252-3p2......__775
MIMAT0013928ssc-miR-1958......__375
MIMAT0013926ssc-miR-4978......__375
MIMAT0013920ssc-miR-424-5p8......__375
MIMAT0013217eca-miR-4248......__375
MIMAT0013105eca-miR-1037......__275
MIMAT0013083eca-miR-15a8......__375
MIMAT0013061eca-miR-107a7......__275
MIMAT0013043eca-miR-4978......__375
MIMAT0013027eca-miR-1958......__375
MIMAT0012955eca-miR-168......__375
MIMAT0012954eca-miR-15b8......__375
MIMAT0012923eca-miR-7616......__175
MIMAT0012886eca-miR-107b7......__275
MIMAT0012853rno-miR-7616......__175
MIMAT0012817ptr-miR-7616......__175
MIMAT0012809ptr-miR-6043_......_875
MIMAT0012803ptr-miR-4978......__375
MIMAT0012793mml-miR-7616......__175
MIMAT0012768mdo-miR-7616......__175
MIMAT0012762mdo-miR-497-5p8......__375
MIMAT0012760mdo-miR-1958......__375
MIMAT0012710hvt-miR-H16__......175
MIMAT0013593bta-miR-424-5p8......__375
MIMAT0012173bdi-miR444a2......__775
MIMAT0012008bta-miR-2436-5p8__......375
MIMAT0011301dre-miR-107b7......__275
MIMAT0010167bra-miR172b-5p6......__175
MIMAT0015293bmo-miR-252-3p3......__875
MIMAT0019184tca-miR-1000-3p2......__775
MIMAT0009995bfl-miR-20678......__375
MIMAT0009994bfl-miR-20668......__375
MIMAT0009991bfl-miR-20137......__275
MIMAT0009990bfl-miR-20648......__375
MIMAT0009986bfl-miR-20606......__175
MIMAT0009936cfa-miR-7616......__175
MIMAT0009784nve-miR-2032a-5p3_......_875
MIMAT0009742spu-miR-20137......__275
MIMAT0009737sko-miR-20137......__275
MIMAT0019151bfl-miR-252b-3p3__......875
MIMAT0009373bta-miR-7616......__175
MIMAT0009242bta-miR-16a8......__375
MIMAT0008337ptr-miR-9226......__175
MIMAT0008143ptr-miR-4248......__375
MIMAT0008060ptr-miR-1958......__375
MIMAT0011140xla-miR-15c8......__375
MIMAT0007872mmu-miR-19067......__275
MIMAT0007754ssc-miR-168......__375
MIMAT0007753ssc-miR-15a8......__375
MIMAT0006692cfa-miR-1958......__375
MIMAT0006691cfa-miR-4978......__375
MIMAT0006687cfa-miR-1037......__275
MIMAT0006676cfa-miR-15b8......__375
MIMAT0006666cfa-miR-1077......__275
MIMAT0006648cfa-miR-168......__375
MIMAT0006647cfa-miR-15a8......__375
MIMAT0006533mml-miR-9226......__175
MIMAT0006459mml-miR-6042_......_775
MIMAT0006359mml-miR-497-5p8......__375
MIMAT0006323mml-miR-424-5p8......__375
MIMAT0006228mml-miR-195-5p8......__375
MIMAT0007739gga-miR-16c-5p8......__375
MIMAT0007737gga-miR-15c-5p8......__375
MIMAT0007494gga-miR-1625-3p6......__175
MIMAT0006047odi-miR-14948......__375
MIMAT0007312oan-miR-1421al-3p1......__675
MIMAT0005974osa-miR444d.12......__775
MIMAT0007237oan-miR-1421v-3p1......__675
MIMAT0007213oan-miR-1405-3p7......__275
MIMAT0007166oan-miR-16a-5p8......__375
MIMAT0007164oan-miR-15a-5p8......__375
MIMAT0007119oan-miR-107-3p7......__275
MIMAT0007052oan-miR-16b-5p8......__375
MIMAT0007050oan-miR-15b-5p8......__375
MIMAT0006966oan-miR-1421b-3p8__......375
MIMAT0006942oan-miR-103-3p7......__275
MIMAT0006847oan-miR-16c-5p8......__375
MIMAT0006845oan-miR-15c-5p8......__375
MIMAT0005399cre-miR1153-5p.23......__875
MIMAT0005351tae-miR444a2......__775
MIMAT0005261smo-miR11046_......_175
MIMAT0005260smo-miR3191......__675
MIMAT0004972hsa-miR-9226......__175
MIMAT0004343bta-miR-4978......__375
MIMAT0004335bta-miR-1958......__375
MIMAT0004334bta-miR-15a8......__375
MIMAT0004145mdo-miR-16-5p8......__375
MIMAT0004144mdo-miR-15a-5p8......__375
MIMAT0004100mdo-miR-1077......__275
MIMAT0004099mdo-miR-103-3p7......__275
MIMAT0012115sme-miR-133b-5p1......__675
MIMAT0003977sme-miR-745-3p1......__675
MIMAT0003792bta-miR-15b8......__375
MIMAT0003785bta-miR-1077......__275
MIMAT0003668xtr-miR-16b8......__375
MIMAT0003663xtr-miR-1037......__275
MIMAT0003651xtr-miR-15c8......__375
MIMAT0003584xtr-miR-1077......__275
MIMAT0003563xtr-miR-16a8......__375
MIMAT0003562xtr-miR-16c8......__375
MIMAT0003561xtr-miR-15b8......__375
MIMAT0003560xtr-miR-15a8......__375
MIMAT0003525bta-miR-16b8......__375
MIMAT0003521bta-miR-1037......__275
MIMAT0003453mmu-miR-497a-5p8......__375
MIMAT0003893mmu-miR-7616......__175
MIMAT0010364hsa-miR-7616......__175
MIMAT0003383rno-miR-497-5p8......__375
MIMAT0003272hsa-miR-6043_......_875
MIMAT0003108tni-miR-168......__375
MIMAT0003107fru-miR-168......__375
MIMAT0003106tni-miR-15a8......__375
MIMAT0003105fru-miR-15a8......__375
MIMAT0003044tni-miR-1077......__275
MIMAT0003043fru-miR-1077......__275
MIMAT0003042tni-miR-1037......__275
MIMAT0003041fru-miR-1037......__275
MIMAT0002820hsa-miR-497-5p8......__375
MIMAT0002657lla-miR-168......__375
MIMAT0002656lla-miR-15a8......__375
MIMAT0002655ptr-miR-168......__375
MIMAT0002654ptr-miR-15a8......__375
MIMAT0002653ppy-miR-168......__375
MIMAT0002652ppy-miR-15a8......__375
MIMAT0002651mml-miR-16-5p8......__375
MIMAT0002650mml-miR-15a-5p8......__375
MIMAT0002649lca-miR-168......__375
MIMAT0002648lca-miR-15a8......__375
MIMAT0002647ppa-miR-168......__375
MIMAT0002646ppa-miR-15a8......__375
MIMAT0002645sla-miR-168......__375
MIMAT0002644sla-miR-15a8......__375
MIMAT0002643mne-miR-168......__375
MIMAT0002642mne-miR-15a8......__375
MIMAT0002641ggo-miR-168......__375
MIMAT0002640ggo-miR-15a8......__375
MIMAT0002639age-miR-168......__375
MIMAT0002638age-miR-15a8......__375
MIMAT0002464ppa-miR-1077......__275
MIMAT0002463mne-miR-1077......__275
MIMAT0002462lla-miR-1077......__275
MIMAT0002461ppy-miR-1077......__275
MIMAT0002460ggo-miR-1077......__275
MIMAT0002459ptr-miR-1077......__275
MIMAT0002458mml-miR-107-3p7......__275
MIMAT0002449mne-miR-1037......__275
MIMAT0002448lla-miR-1037......__275
MIMAT0002447mml-miR-103-3p7......__275
MIMAT0002446ptr-miR-1037......__275
MIMAT0002445ppy-miR-1037......__275
MIMAT0002444ppa-miR-1037......__275
MIMAT0002443ggo-miR-1037......__275
MIMAT0002442age-miR-1037......__275
MIMAT0002317ppa-miR-1958......__375
MIMAT0002316ggo-miR-1958......__375
MIMAT0002209mne-miR-15b8......__375
MIMAT0002208lla-miR-15b8......__375
MIMAT0002207mml-miR-15b-5p8......__375
MIMAT0002206ptr-miR-15b8......__375
MIMAT0002205ppy-miR-15b8......__375
MIMAT0002204ppa-miR-15b8......__375
MIMAT0002203age-miR-15b8......__375
MIMAT0002202ggo-miR-15b8......__375
MIMAT0015214kshv-miR-K12-1-3p6......__175
MIMAT0002155ssc-miR-1077......__275
MIMAT0002154ssc-miR-1037......__275
MIMAT0002125ssc-miR-15b8......__375
MIMAT0001884dre-miR-457b-5p8......__375
MIMAT0001883dre-miR-457a8......__375
MIMAT0001817dre-miR-107a-3p7......__275
MIMAT0001816dre-miR-1037......__275
MIMAT0001776dre-miR-16c-5p8......__375
MIMAT0001775dre-miR-16b8......__375
MIMAT0001774dre-miR-16a8......__375
MIMAT0001773dre-miR-15b-5p8......__375
MIMAT0001772dre-miR-15a-5p8......__375
MIMAT0001617osa-miR444a-3p.12......__775
MIMAT0015147zma-miR162-5p8__......375
MIMAT0001341hsa-miR-424-5p8......__375
MIMAT0001154gga-miR-15b-5p8......__375
MIMAT0001147gga-miR-107-3p7......__275
MIMAT0001145gga-miR-103-3p7......__275
MIMAT0001117gga-miR-15a8......__375
MIMAT0001116gga-miR-16-5p8......__375
MIMAT0022885osa-miR172d-5p6......__175
MIMAT0031918ath-miR172e-5p6......__175
MIMAT0000870rno-miR-195-5p8......__375
MIMAT0000826rno-miR-107-3p7......__275
MIMAT0000824rno-miR-103-3p7......__275
MIMAT0000785rno-miR-16-5p8......__375
MIMAT0000784rno-miR-15b-5p8......__375
MIMAT0004707rno-let-7i-3p1__......675
MIMAT0000647mmu-miR-107-3p7......__275
MIMAT0000548mmu-miR-322-5p8......__375
MIMAT0001619rno-miR-322-5p8......__375
MIMAT0000546mmu-miR-103-3p7......__275
MIMAT0000527mmu-miR-16-5p8......__375
MIMAT0000526mmu-miR-15a-5p8......__375
MIMAT0000461hsa-miR-195-5p8......__375
MIMAT0000417hsa-miR-15b-5p8......__375
MIMAT0004585hsa-let-7i-3p1__......675
MIMAT0000225mmu-miR-195a-5p8......__375
MIMAT0000204ath-miR172b-5p6......__175
MIMAT0000124mmu-miR-15b-5p8......__375
MIMAT0004520mmu-let-7i-3p1__......675
MIMAT0000104hsa-miR-1077......__275
MIMAT0000101hsa-miR-103a-3p7......__275
MIMAT0000069hsa-miR-16-5p8......__375
MIMAT0000068hsa-miR-15a-5p8......__375