VIRmiRNA | Resource for experimental viral miRNA and their targets

Result for your query miRNA sequence
>hvt-miR-h9-5p
uucucau

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	miRNA	Start	Alignment	End	% Identity
Query		1	`ttctcat`	7
MIMAT0022140	osa-miR5507	8	`.......`	2	100
MIMAT0012721	hvt-miR-H9-5p	2	`.......`	8	100
MIMAT0037237	ata-miR9863b-3p	6	`......_`	1	85
MIMAT0037105	ata-miR9863a-3p	6	`......_`	1	85
MIMAT0037045	ssc-miR-9827-5p	8	`......_`	3	85
MIMAT0036729	oha-miR-146b-5p	6	`......_`	1	85
MIMAT0036567	tch-miR-146a-5p	6	`......_`	1	85
MIMAT0036387	gma-miR9756	6	`......_`	1	85
MIMAT0035972	chi-miR-146b-5p	6	`......_`	1	85
MIMAT0035971	chi-miR-146a	6	`......_`	1	85
MIMAT0035856	bra-miR400-5p	7	`_......`	2	85
MIMAT0035619	dvi-miR-9538-3p	6	`_......`	1	85
MIMAT0035429	nve-miR-9464	8	`......_`	3	85
MIMAT0035373	nve-miR-9417	6	`......_`	1	85
MIMAT0033968	esi-miR8623d	1	`_......`	6	85
MIMAT0033960	esi-miR8623a	1	`_......`	6	85
MIMAT0033889	atr-miR8600	2	`_......`	7	85
MIMAT0033769	pxy-miR-8527	8	`_......`	3	85
MIMAT0033728	pxy-miR-8508	6	`_......`	1	85
MIMAT0033140	ppc-miR-8307-5p	7	`_......`	2	85
MIMAT0032922	ppc-miR-8234-5p	8	`......_`	3	85
MIMAT0032666	ssa-miR-7132a-3p	6	`......_`	1	85
MIMAT0032376	ssa-miR-146d-5p	6	`......_`	1	85
MIMAT0032374	ssa-miR-146b-5p	6	`......_`	1	85
MIMAT0032371	ssa-miR-146a-5p	6	`......_`	1	85
MIMAT0031825	cpa-miR8134	6	`......_`	1	85
MIMAT0031615	bbe-miR-2058-5p	6	`......_`	1	85
MIMAT0031613	bbe-miR-2057-5p	6	`......_`	1	85
MIMAT0030925	stu-miR1886i-5p	6	`_......`	1	85
MIMAT0030847	stu-miR7980a	6	`_......`	1	85
MIMAT0030623	prd-miR-7905-3p	6	`......_`	1	85
MIMAT0030126	bdi-miR5185k-3p	8	`......_`	3	85
MIMAT0030124	bdi-miR5185j-3p	8	`......_`	3	85
MIMAT0030122	bdi-miR5185i-3p	8	`......_`	3	85
MIMAT0030120	bdi-miR5185h-3p	8	`......_`	3	85
MIMAT0030118	bdi-miR5185g-3p	8	`......_`	3	85
MIMAT0030116	bdi-miR5185f-3p	8	`......_`	3	85
MIMAT0030114	bdi-miR5185e-3p	8	`......_`	3	85
MIMAT0030112	bdi-miR5185d-3p	8	`......_`	3	85
MIMAT0030110	bdi-miR5185c-3p	8	`......_`	3	85
MIMAT0029424	ipu-miR-146b	6	`......_`	1	85
MIMAT0029423	ipu-miR-146a	6	`......_`	1	85
MIMAT0028497	mdo-miR-7264-3p	1	`......_`	6	85
MIMAT0028403	mmu-miR-7217-3p	6	`......_`	1	85
MIMAT0028266	mml-miR-7166-5p	1	`......_`	6	85
MIMAT0028216	hsa-miR-7153-5p	6	`......_`	1	85
MIMAT0026226	ccr-miR-146a	6	`......_`	1	85
MIMAT0028030	mmu-miR-7063-5p	6	`_......`	1	85
MIMAT0027440	hsa-miR-6770-5p	6	`......_`	1	85
MIMAT0025635	gga-miR-6565-5p	6	`_......`	1	85
MIMAT0025399	tgu-miR-1467-5p	1	`......_`	6	85
MIMAT0025011	hme-miR-6305-3p	8	`......_`	3	85
MIMAT0024545	cca-miR6108b	6	`......_`	1	85
MIMAT0024544	cca-miR6108g	6	`......_`	1	85
MIMAT0024543	cca-miR6108a	6	`......_`	1	85
MIMAT0024507	mse-miR-6099	6	`......_`	1	85
MIMAT0027119	mml-miR-514b-5p	1	`......_`	6	85
MIMAT0024239	ggo-miR-589	6	`......_`	1	85
MIMAT0024135	ggo-miR-146a	6	`......_`	1	85
MIMAT0024096	ggo-miR-146b	6	`......_`	1	85
MIMAT0023775	cgr-miR-146b-5p	6	`......_`	1	85
MIMAT0023774	cgr-miR-146a	6	`......_`	1	85
MIMAT0023122	mtr-miR5743b	6	`......_`	1	85
MIMAT0023121	mtr-miR5743a	6	`......_`	1	85
MIMAT0022775	sha-miR-340	3	`_......`	8	85
MIMAT0022635	ola-miR-146a-5p	6	`......_`	1	85
MIMAT0032129	ath-miR5663-3p	6	`......_`	1	85
MIMAT0022178	osa-miR5542	8	`......_`	3	85
MIMAT0022673	aau-miR172	6	`......_`	1	85
MIMAT0021777	aca-miR-146b-5p	6	`......_`	1	85
MIMAT0021775	aca-miR-146a-5p	6	`......_`	1	85
MIMAT0021674	gma-miR1513c	7	`_......`	2	85
MIMAT0021612	gma-miR5038b	6	`......_`	1	85
MIMAT0021603	gma-miR5369	6	`......_`	1	85
MIMAT0021309	mtr-miR2590g	8	`_......`	3	85
MIMAT0021246	mtr-miR5250	6	`......_`	1	85
MIMAT0021240	mtr-miR5244	3	`_......`	8	85
MIMAT0027087	bdi-miR5185b-3p	8	`......_`	3	85
MIMAT0027086	bdi-miR5185a-3p	8	`......_`	3	85
MIMAT0020627	mmu-miR-5119	3	`_......`	8	85
MIMAT0021063	gma-miR5038a	6	`......_`	1	85
MIMAT0020535	ath-miR5029	7	`_......`	2	85
MIMAT0020525	ath-miR5021	6	`......_`	1	85
MIMAT0020466	bfl-miR-4882a	6	`......_`	1	85
MIMAT0020002	cel-miR-4814-5p	1	`......_`	6	85
MIMAT0019819	hsa-miR-4712-3p	7	`_......`	2	85
MIMAT0019478	pma-miR-146-5p	6	`......_`	1	85
MIMAT0018308	gma-miR4393a	6	`......_`	1	85
MIMAT0018173	mghv-miR-M1-13-3p	3	`_......`	8	85
MIMAT0018095	hsa-miR-3672	6	`_......`	1	85
MIMAT0022963	ssc-miR-146a-5p	6	`......_`	1	85
MIMAT0016883	hsa-miR-4251	8	`......_`	3	85
MIMAT0017920	aly-miR3444b	2	`_......`	7	85
MIMAT0016760	cin-miR-4155-3p	3	`......_`	8	85
MIMAT0016717	cin-miR-4003d-3p	6	`......_`	1	85
MIMAT0016358	gso-miR1507b	1	`_......`	6	85
MIMAT0016357	gso-miR1507a	1	`_......`	6	85
MIMAT0016031	ppy-miR-589	6	`......_`	1	85
MIMAT0015768	ppy-miR-146b-5p	6	`......_`	1	85
MIMAT0015767	ppy-miR-146a	6	`......_`	1	85
MIMAT0017722	aly-miR3444a-3p	3	`_......`	8	85
MIMAT0017604	aly-miR824-3p	3	`......_`	8	85
MIMAT0017583	aly-miR400-5p	7	`_......`	2	85
MIMAT0015417	bmo-miR-2808e	6	`......_`	1	85
MIMAT0015401	bmo-miR-3221	1	`_......`	6	85
MIMAT0015087	hsa-miR-514b-5p	1	`......_`	6	85
MIMAT0014840	mmu-miR-3067-5p	3	`......_`	8	85
MIMAT0014609	tgu-miR-146c	6	`......_`	1	85
MIMAT0014602	tgu-miR-146b-5p	6	`......_`	1	85
MIMAT0014622	tgu-miR-146a-5p	6	`......_`	1	85
MIMAT0013065	eca-miR-146a	6	`......_`	1	85
MIMAT0012891	eca-miR-146b-5p	6	`......_`	1	85
MIMAT0012806	ptr-miR-589	6	`......_`	1	85
MIMAT0012747	mdo-miR-146b-5p	6	`......_`	1	85
MIMAT0012746	mdo-miR-146a-5p	6	`......_`	1	85
MIMAT0013684	bmo-miR-2787-3p	6	`......_`	1	85
MIMAT0012417	dps-miR-2573-3p	1	`_......`	6	85
MIMAT0011178	vun-miR1507b	1	`_......`	6	85
MIMAT0010190	ssc-miR-146b	6	`......_`	1	85
MIMAT0010089	vun-miR1507a	1	`_......`	6	85
MIMAT0010080	gma-miR1507b	1	`_......`	6	85
MIMAT0009984	bfl-miR-2058-5p	6	`......_`	1	85
MIMAT0009983	bfl-miR-2057	6	`......_`	1	85
MIMAT0009917	cfa-miR-589	6	`......_`	1	85
MIMAT0009236	bta-miR-146a	6	`......_`	1	85
MIMAT0009235	bta-miR-146b	6	`......_`	1	85
MIMAT0008039	ptr-miR-146b	6	`......_`	1	85
MIMAT0008038	ptr-miR-146a	6	`......_`	1	85
MIMAT0007822	osa-miR1869	6	`......_`	1	85
MIMAT0006684	cfa-miR-146a	6	`......_`	1	85
MIMAT0006667	cfa-miR-146b	6	`......_`	1	85
MIMAT0006449	mml-miR-589	6	`......_`	1	85
MIMAT0026879	mml-miR-452-3p	3	`_......`	8	85
MIMAT0006204	mml-miR-146b-5p	6	`......_`	1	85
MIMAT0006203	mml-miR-146a-5p	6	`......_`	1	85
MIMAT0007735	gga-miR-146c-5p	6	`......_`	1	85
MIMAT0007589	gga-miR-1697	2	`_......`	7	85
MIMAT0007365	gma-miR1507a	1	`_......`	6	85
MIMAT0007230	oan-miR-146a-5p	6	`......_`	1	85
MIMAT0007007	oan-miR-146b-5p	6	`......_`	1	85
MIMAT0005789	hsa-miR-513c-5p	1	`......_`	6	85
MIMAT0005747	age-miR-513c	1	`......_`	6	85
MIMAT0005702	vvi-miR172d	6	`......_`	1	85
MIMAT0005595	rno-miR-146b-5p	6	`......_`	1	85
MIMAT0005563	xtr-miR-146b	6	`......_`	1	85
MIMAT0005113	ppt-miR1026b	6	`......_`	1	85
MIMAT0005112	ppt-miR1026a	6	`......_`	1	85
MIMAT0004965	cre-miR908.1	6	`......_`	1	85
MIMAT0032024	ath-miR824-3p	3	`......_`	8	85
MIMAT0004241	ath-miR825	1	`......_`	6	85
MIMAT0015243	bmo-miR-71-3p	1	`......_`	6	85
MIMAT0012107	sme-miR-71c-3p	1	`_......`	6	85
MIMAT0012106	sme-miR-71a-1-3p	1	`_......`	6	85
MIMAT0003604	xtr-miR-146a	6	`......_`	1	85
MIMAT0003475	mmu-miR-146b-5p	6	`......_`	1	85
MIMAT0003351	gga-miR-146b-5p	6	`......_`	1	85
MIMAT0004799	hsa-miR-589-5p	6	`......_`	1	85
MIMAT0002809	hsa-miR-146b-5p	6	`......_`	1	85
MIMAT0001844	dre-miR-146b	6	`......_`	1	85
MIMAT0001843	dre-miR-146a	6	`......_`	1	85
MIMAT0001163	gga-miR-146a-5p	6	`......_`	1	85
MIMAT0001001	ath-miR400	7	`_......`	2	85
MIMAT0000852	rno-miR-146a-5p	6	`......_`	1	85
MIMAT0000449	hsa-miR-146a-5p	6	`......_`	1	85
MIMAT0000158	mmu-miR-146a-5p	6	`......_`	1	85