Result for your query miRNA sequence
>mghv-miR-m1-12
uuuggugu

RED =100 % Complementary sequence
.=Identical residue
blue alphabets=mismatch
_=Gap


Acc numbermiRNAStartAlignmentEnd% Identity
Query1tttggtgt8
MIMAT0034232gra-miR87821........8100
MIMAT0029035gga-miR-7440-3p1........8100
MIMAT0018695tca-miR-3832-3p8........1100
MIMAT0018171mghv-miR-M1-12-3p1........8100
MIMAT0016805cin-miR-4187-5p1........8100
MIMAT0012357dps-miR-2548-3p1........8100
MIMAT0037215ata-miR1432-3p1_.......787
MIMAT0035592dvi-miR-971-3p1_.......787
MIMAT0034876efu-miR-92571_.......787
MIMAT0030576prd-miR-9b-5p2......._887
MIMAT0030243bdi-miR7751-3p1......._787
MIMAT0025070rno-miR-63312......._887
MIMAT0024998hme-miR-9711_.......787
MIMAT0020555osa-miR50732......._887
MIMAT0020519ath-miR50151_.......787
MIMAT0019593pma-miR-45611......._787
MIMAT0018748tca-miR-9d-5p2......._887
MIMAT0018544ame-miR-9711_.......787
MIMAT0014745api-miR-9711_.......787
MIMAT0013580cte-miR-27111_.......787
MIMAT0012226dps-miR-971-3p1_.......787
MIMAT0011555crm-miR-79-5p2......._887
MIMAT0005274smo-miR1115-3p8......._287
MIMAT0005487dme-miR-971-3p1_.......787
MIMAT0020322cel-miR-79-5p2......._887
MIMAT0037227ata-miR2275c-3p1......t.887
MIMAT0035777tae-miR2275-3p1......t.887
MIMAT0035535bdi-miR2275c1......t.887
MIMAT0035533bdi-miR2275a1......t.887
MIMAT0035510bdi-miR159c1......t.887
MIMAT0032783ath-miR81841......c.887
MIMAT0031181hsa-miR-79781.c......887
MIMAT0029308mes-miR22751......t.887
MIMAT0028799mdo-miR-7374c-3p8......c.187
MIMAT0025325pde-miR1591......t.887
MIMAT0022465gma-miR56771......c.887
MIMAT0022398ath-miR5638a8......a.187
MIMAT0022329cin-miR-5602-5p1......a.887
MIMAT0021633gma-miR35228......c.187
MIMAT0021212mtr-miR52281.c......887
MIMAT0013307mtr-miR26031......a.887
MIMAT0011759osa-miR2275b1......t.887
MIMAT0011758osa-miR2275a1......t.887
MIMAT0004321ath-miR869.21.c......887
MIMAT0036749oha-miR-1677b-5p6......__175
MIMAT0036702oha-miR-133b-3p1......__675
MIMAT0036699oha-miR-133a-3p1......__675
MIMAT0036524tch-miR-9-5p3......__875
MIMAT0036307chi-miR-9-5p3......__875
MIMAT0036140chi-miR-329a-5p3_......_875
MIMAT0035949chi-miR-133b1......__675
MIMAT0035948chi-miR-133a-3p1......__675
MIMAT0035345gsa-miR-9399-3p1__......675
MIMAT0035288gsa-miR-9-5p3......__875
MIMAT0035045efu-miR-133-3p1......__675
MIMAT0034986efu-miR-93127__......275
MIMAT0034937efu-miR-9-5p3......__875
MIMAT0034780efu-miR-9198b2_......_775
MIMAT0034532eca-miR-8986b1__......675
MIMAT0034477eca-miR-89481__......675
MIMAT0034037gra-miR86661_......_675
MIMAT0033807pxy-miR-9b-5p3......__875
MIMAT0033622sma-miR-8455-5p2......__775
MIMAT0033583sma-miR-8439-3p1_......_675
MIMAT0033398str-miR-9-5p3......__875
MIMAT0033200ppc-miR-8328-5p2......__775
MIMAT0033170ppc-miR-8316-3p2__......775
MIMAT0033067ppc-miR-8282a-5p7_......_275
MIMAT0032915ppc-miR-133-3p1......__675
MIMAT0032730ssa-miR-9b-5p3......__875
MIMAT0032721ssa-miR-9a-5p3......__875
MIMAT0032340ssa-miR-133b-3p1......__675
MIMAT0031726bbe-miR-9-5p3......__875
MIMAT0031619bbe-miR-2060a-3p7_......_275
MIMAT0031535ppe-miR3627-3p1__......675
MIMAT0030843prd-miR-7970-3p2......__775
MIMAT0030563prd-miR-7911c-3p3__......875
MIMAT0030500prd-miR-9a-5p3......__875
MIMAT0030476prd-miR-7868-5p3......__875
MIMAT0030430hsa-miR-7855-5p1_......_675
MIMAT0030377ptc-miR7817a1......__675
MIMAT0030306bdi-miR7777-5p.12......__775
MIMAT0029949bta-miR-133c2......__775
MIMAT0029945bta-miR-2285w6......__175
MIMAT0032206lva-miR-133-3p1......__675
MIMAT0032192lva-miR-9-5p3......__875
MIMAT0032159pmi-miR-133-3p1......__675
MIMAT0032142pmi-miR-9-5p3......__875
MIMAT0029763cbn-miR-76401......__675
MIMAT0029761cbn-miR-2443......__875
MIMAT0029528ipu-miR-93......__875
MIMAT0029409ipu-miR-133c1......__675
MIMAT0029408ipu-miR-133b1......__675
MIMAT0029373lja-miR75461_......_675
MIMAT0028648mdo-miR-7324-5p8__......375
MIMAT0028554mdo-miR-9b-5p3......__875
MIMAT0026446sbi-miR6232b-5p3......__875
MIMAT0026321ccr-miR-9-3p3......__875
MIMAT0026055mdm-miR7124b6_......_175
MIMAT0026054mdm-miR7124a6_......_175
MIMAT0027768mmu-miR-6934-5p1_......_675
MIMAT0025701gga-miR-6607-5p3_......_875
MIMAT0025433pol-miR-133-3p1......__675
MIMAT0025420pol-miR-9b-5p3......__875
MIMAT0025358ssc-miR-93......__875
MIMAT0025078mmu-miR-133c1......__675
MIMAT0025002hme-miR-9b3......__875
MIMAT0027330ppe-miR62941__......675
MIMAT0024786hbr-miR61683_......_875
MIMAT0024686nta-miR171a3_......_875
MIMAT0024272ggo-miR-133b1......__675
MIMAT0024008cgr-miR-93......__875
MIMAT0023581tca-miR-9e-5p3......__875
MIMAT0023424hco-miR-59323......__875
MIMAT0023392hco-miR-59192......__775
MIMAT0023348hco-miR-93......__875
MIMAT0023270osa-miR58016......__175
MIMAT0022784sha-miR-133a1......__675
MIMAT0022783sha-miR-93......__875
MIMAT0022636ola-miR-9a-5p3......__875
MIMAT0022546ola-miR-9b-5p3......__875
MIMAT0023082tur-miR-9-5p3......__875
MIMAT0022467gma-miR56791_......_675
MIMAT0022443ath-miR56651_......_675
MIMAT0022165osa-miR55303__......875
MIMAT0021990aca-miR-9-5p3......__875
MIMAT0021797aca-miR-1677b-5p6......__175
MIMAT0021749aca-miR-133a1......__675
MIMAT0021683sbi-miR53858_......_375
MIMAT0021472asu-miR-79-5p1......__675
MIMAT0021431asu-miR-9-5p3......__875
MIMAT0021023hsa-miR-5002-5p3......__875
MIMAT0020261emu-miR-93......__875
MIMAT0020235egr-miR-93......__875
MIMAT0020189dme-miR-4965-3p8__......375
MIMAT0020161dme-miR-4949-3p3__......875
MIMAT0019877hsa-miR-3591-3p8__......375
MIMAT0019462pma-miR-133b-3p1......__675
MIMAT0019375pma-miR-9b3......__875
MIMAT0019373pma-miR-9a-5p3......__875
MIMAT0018442nlo-miR-9a3......__875
MIMAT0018405ngi-miR-9a3......__875
MIMAT0018714tca-miR-9c-5p3......__875
MIMAT0018010vvi-miR2950-3p1__......675
MIMAT0016396cin-miR-9-5p3......__875
MIMAT0017893rno-miR-35917__......275
MIMAT0017862rno-miR-35768__......375
MIMAT0017854rno-miR-1188-5p1__......675
MIMAT0017843rno-miR-126b7......__275
MIMAT0015756ppy-miR-133b1......__675
MIMAT0016973ppy-miR-133c1......__675
MIMAT0015729ppy-miR-93......__875
MIMAT0015697nvi-miR-9a3......__875
MIMAT0017623aly-miR839-5p6_......_175
MIMAT0015463bmo-miR-32781_......_675
MIMAT0014749api-miR-9b3......__875
MIMAT0014748api-miR-9a3......__875
MIMAT0014702hsv2-miR-H201......__675
MIMAT0014672hma-miR-30051_......_675
MIMAT0014667hma-miR-3003a-5p8......__375
MIMAT0014571tgu-miR-133-3p1......__675
MIMAT0014502tgu-miR-9-5p3......__875
MIMAT0014434cqu-miR-2941-1-5p3__......875
MIMAT0014380cqu-miR-9-5p3......__875
MIMAT0014348ghr-miR29501__......675
MIMAT0014324aae-miR-9b3......__875
MIMAT0014323aae-miR-9a3......__875
MIMAT0014212aae-miR-9c-5p3......__875
MIMAT0014100bma-miR-9-5p2......__775
MIMAT0015332zma-miR171n-5p3_......_875
MIMAT0013869ssc-miR-133b1......__675
MIMAT0013097eca-miR-133b1......__675
MIMAT0012997eca-miR-133a1......__675
MIMAT0012967eca-miR-9a3......__875
MIMAT0013633bmo-miR-2760-3p3......__875
MIMAT0012671dpu-miR-9-5p3......__875
MIMAT0015302bmo-miR-9c-5p3......__875
MIMAT0012614bmo-miR-27367......__275
MIMAT0013402mtr-miR26361......__675
MIMAT0013304mtr-miR26013......__875
MIMAT0013287mtr-miR25971......__675
MIMAT0011938bta-miR-23863......__875
MIMAT0011737ppc-miR-93......__875
MIMAT0011590crm-miR-50-3p6......__175
MIMAT0011583crm-miR-244-5p3......__875
MIMAT0011248sme-miR-9a-5p3......__875
MIMAT0011247sme-miR-9b-5p3......__875
MIMAT0010146lmi-miR-9a-5p3......__875
MIMAT0010090tca-miR-9a-5p3......__875
MIMAT0009465bfl-miR-9-5p3......__875
MIMAT0009835cfa-miR-133b1......__675
MIMAT0009668spu-miR-1331......__675
MIMAT0009653spu-miR-9-5p3......__875
MIMAT0009610sko-miR-9-5p3......__875
MIMAT0009562lgi-miR-9-5p3......__875
MIMAT0009508cte-miR-9-5p3......__875
MIMAT0009161bmo-miR-9b-5p3......__875
MIMAT0009389bta-miR-9-5p3......__875
MIMAT0009226bta-miR-133b1......__675
MIMAT0009225bta-miR-133a1......__675
MIMAT0009113dya-miR-9b3......__875
MIMAT0009112dya-miR-9c3......__875
MIMAT0009070dya-miR-9a3......__875
MIMAT0009047dwi-miR-9b3......__875
MIMAT0009034dwi-miR-9a3......__875
MIMAT0008992dwi-miR-9c3......__875
MIMAT0032079dvi-miR-4-5p3......__875
MIMAT0008929dvi-miR-9a-5p3......__875
MIMAT0008925dvi-miR-9b-5p3......__875
MIMAT0008924dvi-miR-9c-5p3......__875
MIMAT0008843dsi-miR-9a3......__875
MIMAT0008827dse-miR-9b3......__875
MIMAT0008812dse-miR-9c3......__875
MIMAT0008800dse-miR-9a3......__875
MIMAT0008746dpe-miR-9c3......__875
MIMAT0008745dpe-miR-9b3......__875
MIMAT0008717dpe-miR-9a3......__875
MIMAT0008683dmo-miR-9c3......__875
MIMAT0008670dmo-miR-9a3......__875
MIMAT0008666dmo-miR-9b3......__875
MIMAT0008606dgr-miR-9c3......__875
MIMAT0008589dgr-miR-9a3......__875
MIMAT0008582dgr-miR-9b3......__875
MIMAT0008554der-miR-9c3......__875
MIMAT0008507der-miR-9b3......__875
MIMAT0008505der-miR-9a3......__875
MIMAT0008458dan-miR-9a3......__875
MIMAT0008456dan-miR-9c3......__875
MIMAT0008416dan-miR-9b3......__875
MIMAT0019134tca-miR-9b-5p2......__775
MIMAT0008030ptr-miR-133b1......__675
MIMAT0007924sly-miR171c3_......_875
MIMAT0007910sly-miR19183_......_875
MIMAT0006674cfa-miR-93......__875
MIMAT0006189mml-miR-133b-3p1......__675
MIMAT0006777mml-miR-133c-3p1......__675
MIMAT0006160mml-miR-9-5p3......__875
MIMAT0007665gga-miR-17587_......_275
MIMAT0006140mdo-miR-15411__......675
MIMAT0015263cin-miR-200-5p7_......_275
MIMAT0007346gga-miR-1467-3p8__......375
MIMAT0007150oan-miR-133c1......__675
MIMAT0006997oan-miR-133b-3p1......__675
MIMAT0006792oan-miR-9-5p3......__875
MIMAT0005843mmu-miR-1188-5p1__......675
MIMAT0005212ppt-miR1079-3p6......__175
MIMAT0020873dme-miR-976-5p2_......_775
MIMAT0004087mdo-miR-9a-5p3......__875
MIMAT0012108sme-miR-79-5p3......__875
MIMAT0004194bmo-miR-9a-5p3......__875
MIMAT0003649xtr-miR-9-5p3......__875
MIMAT0003555xtr-miR-9b-5p3......__875
MIMAT0003553xtr-miR-9a-5p3......__875
MIMAT0003126rno-miR-133b-3p1......__675
MIMAT0003058tni-miR-1331......__675
MIMAT0003057fru-miR-1331......__675
MIMAT0002911tni-miR-93......__875
MIMAT0002910fru-miR-93......__875
MIMAT0026573mml-miR-21-3p8__......375
MIMAT0002279age-miR-93......__875
MIMAT0002278mne-miR-93......__875
MIMAT0002277lla-miR-93......__875
MIMAT0002276ggo-miR-93......__875
MIMAT0002275ptr-miR-93......__875
MIMAT0002243ptr-miR-133a1......__675
MIMAT0002180kshv-miR-K12-10b1__......675
MIMAT0002169ssc-miR-9-23......__875
MIMAT0002168ssc-miR-9-13......__875
MIMAT0001832dre-miR-133c-3p1......__675
MIMAT0001831dre-miR-133b-3p1......__675
MIMAT0001830dre-miR-133a-3p1......__675
MIMAT0001769dre-miR-9-5p3......__875
MIMAT0015198zma-miR171c-5p3_......_875
MIMAT0001530aga-miR-9c3......__875
MIMAT0001529aga-miR-9b3......__875
MIMAT0001526aga-miR-9a3......__875
MIMAT0001492ame-miR-9b3......__875
MIMAT0001491ame-miR-9a3......__875
MIMAT0001213dps-miR-9c3......__875
MIMAT0001212dps-miR-9b3......__875
MIMAT0001211dps-miR-9a3......__875
MIMAT0001195gga-miR-9-5p3......__875
MIMAT0017138rno-miR-181a-2-3p8_......_375
MIMAT0000839rno-miR-133a-3p1......__675
MIMAT0000781rno-miR-9a-5p3......__875
MIMAT0000770hsa-miR-133b1......__675
MIMAT0000769mmu-miR-133b-3p1......__675
MIMAT0000502cbr-miR-2443......__875
MIMAT0000441hsa-miR-9-5p3......__875
MIMAT0000427hsa-miR-133a-3p1......__675
MIMAT0000395dme-miR-9b-5p3......__875
MIMAT0000392dme-miR-9c-5p3......__875
MIMAT0000300cel-miR-244-5p3......__875
MIMAT0000145mmu-miR-133a-3p1......__675
MIMAT0000142mmu-miR-9-5p3......__875
MIMAT0000114dme-miR-9a-5p3......__875
MIMAT0020785dme-miR-4-5p2......__775
MIMAT0004494hsa-miR-21-3p8__......375