VIRmiRNA -A database of viral miRNA
VMR_0041 details

miRNA Id:VMR_0041
Virus:Bovine leukemia virus (BLV)
Taxonomy:View
Nomenclature:blv-miR-b1-5p
miRNA Sequence: aggcugugguggugcacuggcuu
Length: 23
Predicted secondary structure (UNAfold):
GC Content (%):47.83
pre-miRNA:blv-miR-b1
pre-miRNA Sequence:aggcugugguggugcacuggcuuaguggaguagucaguguaccaucacaagccucu
Arm: 5p
Cell line: YR2, L267 cells
Method:Solexa(NGS)
Reference: 23345446, 22308400
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed