VIRmiRNA -A database of viral miRNA
VMR_0060 details

miRNA Id:VMR_0060
Virus:Bandicoot papillomatosis carcinomatosis virus type 1 (BPCV1)
Taxonomy:View
Nomenclature:bpcv1-miR-b1
miRNA Sequence: aauacugugcuugagagugcgc
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):50
pre-miRNA:bpcv1-mir-b1
pre-miRNA Sequence:aucgcaugggaacucucaggcuuaguacuuuauaaaccgaaaguauaauacugugcuugagagugcgcggu
Arm: 3p
Cell line: HEK293T cells
Method:Northern blot analysis
Reference: 21345962
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed