VIRmiRNA -A database of viral miRNA
VMR_0107 details

miRNA Id:VMR_0107
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart15
miRNA Sequence: gucagugguuuuguuuccuuga
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):40.91
pre-miRNA:ebv-mir-bart15
pre-miRNA Sequence:ugugccgcuuggagggaaacaugaccaccugaagucuguuaaccaggucagugguuuuguuuccuugauagagacaca
Arm: 3p
Cell line: Jijoye, B95.8, HEK293 cells
Method:Northern blot analysis, Cloned, RT-PCR
Reference: 16540699, 17604727, 20808852
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed