VIRmiRNA -A database of viral miRNA
VMR_0124 details

miRNA Id:VMR_0124
Virus:Epstein Barr virus (EBV)
Taxonomy:View
Nomenclature:ebv-miR-bart3
miRNA Sequence: cgcaccacuagucaccaggugu
Length: 22
Predicted secondary structure (UNAfold):
GC Content (%):59.09
pre-miRNA:ebv-mir-bart3
pre-miRNA Sequence:ccuuugguggaaccuaguguuaguguugugcuguaaauaaguguccagcgcaccacuagucaccaggugucaccggagg
Arm: 3p
Cell line: Jijoye, BC-1 cells
Method:NGS, Northern blot analysis
Reference: 20862214, 16557291
BLAST (miRBase): 8mer seed | 7mer seed
BLAST (VIRmiRNA): 8mer seed | 7mer seed
Align (miRBase): 8mer seed | 7mer seed
Align (VIRmiRNA): 8mer seed | 7mer seed
Align (Human genes): 8mer seed | 7mer seed