miRNA Id: | VMR_0515 |
Virus: | Mareks disease virus type 2 (MDV2) |
Taxonomy: | View |
Nomenclature: | mdv2-miR-m27-3p |
miRNA Sequence: | gcgucgagcaccgugcuggagga |
Length: | 23 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 69.57 |
pre-miRNA: | mdv2-mir-m27 |
pre-miRNA Sequence: | ucccuccuucguccgguguucgaggcgugagacuuuuguauugccgcgucgagcaccgugcuggaggaagga |
Arm: | 3p |
Cell line: | MSB-1, CEF cells |
Method: | Cloned, Solexa(NGS) |
Reference: | 17459919, 19328516, 24449754 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |