miRNA Id: | VMR_1090 |
Virus: | Rhesus rhadinovirus (RRV) |
Taxonomy: | View |
Nomenclature: | rrv-miR-rr1-1-3p |
miRNA Sequence: | ggccaccgaggaugcggu |
Length: | 18 |
Predicted secondary structure (UNAfold): | |
GC Content (%): | 72.22 |
pre-miRNA: | rrv-mir-rr1-1 |
pre-miRNA Sequence: | gggucagaccccgcgaucgcaccuuuggccggccggccucugcccggccaccgaggaugcggucaaugggucgaaccc |
Arm: | 3p |
Cell line: | HEK293T cells |
Method: | Deep sequencing |
Reference: | 20655562, 17451774 |
BLAST (miRBase): | 8mer seed | 7mer seed |
BLAST (VIRmiRNA): | 8mer seed | 7mer seed |
Align (miRBase): | 8mer seed | 7mer seed |
Align (VIRmiRNA): | 8mer seed | 7mer seed |
Align (Human genes): | 8mer seed | 7mer seed |