VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>rrv-miR-rr1-8-3p
aagugcu

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`aagtgct`	7
ENST00000605654	ENSG00000270345 transcript	6	`.......`	12	100
ENST00000454480	ENSG00000237547 transcript	6	`.......`	12	100
ENST00000509135	ENSG00000250688 transcript	3	`.......`	9	100
ENST00000572797	GRCh37:HSCHR19LRC	519	`.......`	513	100
ENST00000573149	ENSG00000262055 transcript	1387	`.......`	1381	100
ENST00000606598	ENSG00000272813 transcript	865	`.......`	871	100
ENST00000601331	ENSG00000268291 transcript	467	`.......`	461	100
ENST00000576598	ENSG00000262675 transcript	41	`.......`	47	100
ENST00000606805	ENSG00000273194 transcript	865	`.......`	871	100
ENST00000579792	ENSG00000264945 transcript	137	`.......`	131	100
ENST00000575050	ENSG00000263260 transcript	455	`.......`	449	100
ENST00000573118	GRCh37:HSCHR19LRC	519	`.......`	513	100
ENST00000571203	ENSG00000262463 transcript	455	`.......`	449	100
ENST00000573914	ENSG00000262625 transcript	137	`.......`	131	100
ENST00000571502	ENSG00000263145 transcript	455	`.......`	449	100
ENST00000577002	GRCh37:HSCHR19LRC	519	`.......`	513	100
ENST00000572194	ENSG00000261849 transcript	137	`.......`	131	100
ENST00000601316	ENSG00000273022 transcript	130	`.......`	124	100
ENST00000601944	ENSG00000273041 transcript	130	`.......`	124	100
ENST00000575488	ENSG00000262821 transcript	126	`.......`	132	100
ENST00000605432	ENSG00000271273 transcript	562	`.......`	556	100
ENST00000601928	ENSG00000269498 transcript	574	`.......`	568	100
ENST00000603192	ENSG00000271165 transcript	897	`.......`	891	100
ENST00000601330	ENSG00000269328 transcript	322	`.......`	328	100
ENST00000598082	ENSG00000269328 transcript	328	`.......`	334	100
ENST00000598289	ENSG00000269581 transcript	167	`.......`	161	100
ENST00000600024	ENSG00000269219 transcript	433	`.......`	427	100
ENST00000597568	ENSG00000269475 transcript	717	`.......`	711	100
ENST00000598151	ENSG00000268999 transcript	430	`.......`	436	100
ENST00000598151	ENSG00000268999 transcript	1456	`.......`	1450	100
ENST00000598151	ENSG00000268999 transcript	1816	`.......`	1810	100
ENST00000594713	ENSG00000268999 transcript	35	`.......`	41	100
ENST00000594713	ENSG00000268999 transcript	1061	`.......`	1055	100
ENST00000594713	ENSG00000268999 transcript	1421	`.......`	1415	100
ENST00000597460	ENSG00000269557 transcript	2130	`.......`	2136	100
ENST00000598344	ENSG00000269398 transcript	169	`.......`	163	100
ENST00000599076	ENSG00000268523 transcript	336	`.......`	330	100
ENST00000598680	ENSG00000269344 transcript	145	`.......`	151	100
ENST00000603321	ENSG00000271501 transcript	53	`.......`	59	100
ENST00000598705	ENSG00000268547 transcript	320	`.......`	314	100
ENST00000603850	ENSG00000271013 transcript	1156	`.......`	1150	100
ENST00000605746	ENSG00000270536 transcript	237	`.......`	231	100
ENST00000602202	ENSG00000269322 transcript	418	`.......`	424	100
ENST00000608922	ENSG00000272753 transcript	1434	`.......`	1440	100
ENST00000602392	GRCh37:HG344	928	`.......`	934	100
ENST00000595303	GRCh37:HG344	207	`.......`	213	100
ENST00000608675	ENSG00000273410 transcript	12	`.......`	6	100
ENST00000608681	ENSG00000273468 transcript	11	`.......`	17	100
ENST00000610035	GRCh37:HG1082	223	`.......`	229	100
ENST00000609989	ENSG00000272587 transcript	3690	`.......`	3684	100
ENST00000608608	GRCh37:HG174	1698	`.......`	1692	100
ENST00000609246	ENSG00000272867 transcript	847	`.......`	841	100
ENST00000609246	ENSG00000272867 transcript	919	`.......`	925	100
ENST00000609501	ENSG00000273260 transcript	829	`.......`	835	100
ENST00000609501	ENSG00000273260 transcript	1132	`.......`	1138	100
ENST00000599372	ENSG00000268481 transcript	45	`.......`	39	100
ENST00000607301	GRCh37:HG1074	1930	`.......`	1924	100
ENST00000602364	GRCh37:HG1426	1335	`.......`	1341	100
ENST00000595540	ENSG00000268185 transcript	334	`.......`	328	100
ENST00000595540	ENSG00000268185 transcript	2627	`.......`	2633	100
ENST00000597241	ENSG00000269567 transcript	95	`.......`	101	100
ENST00000596868	ENSG00000269567 transcript	95	`.......`	101	100
ENST00000605628	ENSG00000270481 transcript	137	`.......`	131	100
ENST00000604676	ENSG00000270645 transcript	455	`.......`	449	100
ENST00000605768	GRCh37:HG1079	519	`.......`	513	100
ENST00000604353	ENSG00000270803 transcript	110	`.......`	116	100
ENST00000577993	ENSG00000265464 transcript	175	`.......`	181	100
ENST00000577283	ENSG00000264011 transcript	301	`.......`	307	100
ENST00000577283	ENSG00000264011 transcript	645	`.......`	651	100
ENST00000584161	ENSG00000264481 transcript	21	`.......`	15	100
ENST00000578140	ENSG00000264117 transcript	231	`.......`	225	100
ENST00000583851	ENSG00000264639 transcript	109	`.......`	115	100
ENST00000583851	ENSG00000264639 transcript	2239	`.......`	2233	100
ENST00000599294	ENSG00000268345 transcript	1328	`.......`	1334	100
ENST00000605243	ENSG00000271476 transcript	631	`.......`	637	100
ENST00000600401	ENSG00000267899 transcript	4985	`.......`	4991	100
ENST00000598617	ENSG00000269500 transcript	476	`.......`	470	100
ENST00000606625	ENSG00000271915 transcript	937	`.......`	931	100
ENST00000598123	ENSG00000268607 transcript	528	`.......`	534	100
ENST00000595150	ENSG00000269822 transcript	803	`.......`	797	100
ENST00000599869	ENSG00000268294 transcript	1234	`.......`	1228	100
ENST00000595351	ENSG00000268633 transcript	433	`.......`	439	100
ENST00000595351	ENSG00000268633 transcript	1243	`.......`	1237	100
ENST00000600471	ENSG00000267817 transcript	363	`.......`	357	100
ENST00000595827	ENSG00000268780 transcript	150	`.......`	144	100
ENST00000600622	ENSG00000268023 transcript	35	`.......`	41	100
ENST00000601969	ENSG00000268023 transcript	36	`.......`	42	100
ENST00000600914	ENSG00000268011 transcript	168	`.......`	174	100
ENST00000599332	ENSG00000269669 transcript	135	`.......`	141	100
ENST00000595768	ENSG00000267902 transcript	137	`.......`	131	100
ENST00000594789	ENSG00000268169 transcript	155	`.......`	149	100
ENST00000600185	ENSG00000269348 transcript	470	`.......`	464	100
ENST00000594832	ENSG00000269664 transcript	155	`.......`	149	100
ENST00000597677	ENSG00000268451 transcript	158	`.......`	152	100
ENST00000598470	ENSG00000268451 transcript	152	`.......`	146	100
ENST00000601591	ENSG00000268867 transcript	890	`.......`	896	100
ENST00000599331	ENSG00000268420 transcript	73	`.......`	67	100
ENST00000596444	GRCh37:HG497	1184	`.......`	1178	100
ENST00000596444	GRCh37:HG497	2874	`.......`	2868	100
ENST00000571985	ENSG00000262711 transcript	130	`.......`	136	100
ENST00000570615	ENSG00000261851 transcript	79	`.......`	73	100
ENST00000576405	GRCh37:HG1257	1827	`.......`	1833	100
ENST00000576405	GRCh37:HG1257	2132	`.......`	2126	100
ENST00000572055	GRCh37:HG1257	881	`.......`	875	100
ENST00000602440	ENSG00000270025 transcript	305	`.......`	299	100
ENST00000602440	ENSG00000270025 transcript	984	`.......`	990	100
ENST00000578342	ENSG00000265578 transcript	1119	`.......`	1125	100
ENST00000582007	ENSG00000264436 transcript	1637	`.......`	1643	100
ENST00000580164	ENSG00000263605 transcript	318	`.......`	312	100
ENST00000580164	ENSG00000263605 transcript	997	`.......`	1003	100
ENST00000575786	ENSG00000262374 transcript	499	`.......`	493	100
ENST00000600248	ENSG00000268956 transcript	54	`.......`	60	100
ENST00000576727	GRCh37:HG1257	329	`.......`	323	100
ENST00000457631	ENSG00000263067 transcript	1215	`.......`	1221	100
ENST00000456236	ENSG00000263067 transcript	1339	`.......`	1345	100
ENST00000573109	GRCh37:HG1257	1324	`.......`	1330	100
ENST00000573109	GRCh37:HG1257	2020	`.......`	2026	100
ENST00000578771	ENSG00000265397 transcript	1456	`.......`	1462	100
ENST00000578771	ENSG00000265397 transcript	1880	`.......`	18	100