VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>sgiv-miR-11
uuuacgcg

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`tttacgcg`	8
ENST00000315965	ENSG00000177820 transcript	796	`........`	803	100
ENST00000406819	ENSG00000219249 transcript	868	`........`	875	100
ENST00000602524	GRCh37:10:22614862:22615760:1	23	`........`	16	100
ENST00000394457	GRCh37:2:61404664:61418338:1	564	`........`	571	100
ENST00000357022	GRCh37:2:61404553:61414686:1	675	`........`	682	100
ENST00000469489	GRCh37:HSCHR6	1811	`........`	1818	100
ENST00000470485	GRCh37:HSCHR6	612	`........`	619	100
ENST00000461964	GRCh37:HSCHR6	1035	`........`	1042	100
ENST00000423881	GRCh37:HSCHR6	1626	`........`	1633	100
ENST00000413314	GRCh37:HSCHR6	1688	`........`	1695	100
ENST00000485947	GRCh37:10:17271290:17273092:1	875	`........`	868	100
ENST00000342331	GRCh37:12:108168162:108170421:1	849	`........`	842	100
ENST00000491538	GRCh37:2:54558124:54610879:1	549	`........`	542	100
ENST00000576995	GRCh37:17:79078886:79083172:1	3519	`........`	3526	100
ENST00000575712	GRCh37:17:79008956:79083187:1	2327	`........`	2334	100
ENST00000572329	GRCh37:17:79008951:79083172:1	1963	`........`	1970	100
ENST00000321280	GRCh37:17:79008951:79083038:1	1874	`........`	1881	100
ENST00000488385	GRCh37:3:49449645:49450859:1	119	`........`	126	100
ENST00000273590	GRCh37:3:49449639:49453908:1	125	`........`	132	100
ENST00000542388	GRCh37:12:27521269:27573523:1	180	`........`	173	100
ENST00000457040	GRCh37:12:27521228:27573658:1	284	`........`	277	100
ENST00000266503	GRCh37:12:27485988:27573827:1	447	`........`	440	100
ENST00000261178	GRCh37:12:27485988:27573523:1	303	`........`	296	100
ENST00000311001	GRCh37:12:27485988:27573466:1	405	`........`	398	100
ENST00000546179	GRCh37:12:27485853:27573482:1	471	`........`	464	100
ENST00000395901	GRCh37:12:27485853:27573466:1	471	`........`	464	100
ENST00000544915	GRCh37:12:27485787:27576241:1	546	`........`	539	100
ENST00000523505	GRCh37:7:106297211:106301442:-1	931	`........`	938	100
ENST00000523505	GRCh37:7:106297211:106301442:-1	2205	`......._`	2211	87
ENST00000341901	GRCh37:16:28303840:28335170:1	1361	`........`	1354	100
ENST00000393170	GRCh37:14:93708384:93760495:-1	1052	`........`	1045	100
ENST00000553975	GRCh37:14:93708384:93760495:-1	1052	`........`	1045	100
ENST00000554565	GRCh37:14:93708379:93799385:-1	1265	`........`	1258	100
ENST00000334746	GRCh37:14:93703896:93799367:-1	2515	`........`	2508	100
ENST00000334746	GRCh37:14:93703896:93799367:-1	8192	`......._`	8198	87
ENST00000355125	GRCh37:14:93703896:93760274:-1	907	`........`	900	100
ENST00000355125	GRCh37:14:93703896:93760274:-1	6584	`......._`	6590	87
ENST00000354105	GRCh37:10:101992055:102027437:-1	800	`........`	807	100
ENST00000496796	GRCh37:10:102005557:102027380:-1	477	`........`	484	100
ENST00000466955	GRCh37:10:101997915:102027388:-1	254	`........`	261	100
ENST00000482452	GRCh37:10:101992056:102027355:-1	401	`........`	408	100
ENST00000468709	GRCh37:10:101992055:102027437:-1	569	`........`	576	100
ENST00000537548	GRCh37:20:43922116:43937169:-1	748	`........`	755	100
ENST00000353917	GRCh37:20:43922087:43936967:-1	690	`........`	697	100
ENST00000342716	GRCh37:20:43922087:43936967:-1	690	`........`	697	100
ENST00000360607	GRCh37:20:43922090:43936967:-1	690	`........`	697	100
ENST00000372754	GRCh37:20:43922085:43934231:-1	512	`........`	519	100
ENST00000372756	GRCh37:20:43922085:43934231:-1	512	`........`	519	100
ENST00000479155	GRCh37:17:18137216:18148189:1	4420	`........`	4427	100
ENST00000316843	GRCh37:17:18128901:18148189:1	2845	`........`	2852	100
ENST00000493273	GRCh37:7:96635805:96639488:1	751	`........`	744	100
ENST00000389266	GRCh37:7:30634297:30673649:1	153	`........`	160	100
ENST00000310992	GRCh37:7:130417401:130418888:-1	734	`........`	741	100
ENST00000275227	GRCh37:6:133090509:133119692:-1	1551	`........`	1558	100
ENST00000607882	GRCh37:7:66147151:66274649:1	798	`........`	805	100
ENST00000607882	GRCh37:7:66147151:66274649:1	815	`_.......`	809	87
ENST00000550295	GRCh37:12:100967587:100994289:1	19	`........`	26	100
ENST00000477288	GRCh37:6:30876019:30894236:1	1811	`........`	1818	100
ENST00000475845	GRCh37:6:30880000:30881883:1	612	`........`	619	100
ENST00000483318	GRCh37:6:30879728:30881883:1	1035	`........`	1042	100
ENST00000376316	GRCh37:6:30875998:30881883:1	1626	`........`	1633	100
ENST00000259895	GRCh37:6:30875961:30881883:1	1688	`........`	1695	100
ENST00000566133	GRCh37:16:89857971:89859133:-1	405	`........`	412	100
ENST00000490912	GRCh37:7:26231469:26241149:-1	702	`........`	709	100
ENST00000288048	GRCh37:1:12806163:12823847:1	3319	`........`	3312	100
ENST00000572977	GRCh37:17:80900031:80964864:-1	700	`........`	693	100
ENST00000495311	GRCh37:4:57843948:57845127:1	339	`........`	346	100
ENST00000381227	GRCh37:4:57843908:57897324:1	187	`........`	194	100
ENST00000450656	GRCh37:4:57843888:57857013:1	190	`........`	197	100
ENST00000264230	GRCh37:4:57829536:57844989:-1	65	`........`	58	100
ENST00000473990	GRCh37:7:24782964:24789413:-1	826	`........`	819	100
ENST00000439301	GRCh37:20:34359923:34538288:1	5709	`........`	5716	100
ENST00000439301	GRCh37:20:34359923:34538288:1	303	`......._`	309	87
ENST00000374012	GRCh37:20:34359905:34538303:1	5792	`........`	5799	100
ENST00000374012	GRCh37:20:34359905:34538303:1	321	`......._`	327	87
ENST00000370070	GRCh37:1:107682639:108024092:1	1562	`........`	1569	100
ENST00000370072	GRCh37:1:107682639:108024092:1	1562	`........`	1569	100
ENST00000370061	GRCh37:1:107682639:108024092:1	1562	`........`	1569	100
ENST00000542803	GRCh37:1:107682639:108024092:1	1562	`........`	1569	100
ENST00000370071	GRCh37:1:107682629:108024450:1	1572	`........`	1579	100
ENST00000370073	GRCh37:1:107682629:108024450:1	1572	`........`	1579	100
ENST00000477948	GRCh37:1:107803425:107876645:1	822	`........`	829	100
ENST00000370065	GRCh37:1:107691216:108023462:1	854	`........`	861	100
ENST00000370066	GRCh37:1:107691216:108023462:1	854	`........`	861	100
ENST00000370067	GRCh37:1:107683661:108026080:1	1481	`........`	1488	100
ENST00000294649	GRCh37:1:107683549:107953207:1	1593	`........`	1600	100
ENST00000370068	GRCh37:1:107683442:108025030:1	1700	`........`	1707	100
ENST00000370074	GRCh37:1:107682629:108024475:1	1572	`........`	1579	100
ENST00000375123	GRCh37:9:100615536:100618986:1	2171	`........`	2178	100
ENST00000525861	GRCh37:11:76571979:76732390:1	332	`........`	339	100
ENST00000535161	GRCh37:1:100550677:100598444:-1	1824	`........`	1831	100
ENST00000462159	GRCh37:1:100549119:100598511:-1	2063	`........`	2070	100
ENST00000287482	GRCh37:1:100549119:100598511:-1	1971	`........`	1978	100
ENST00000410047	GRCh37:7:23145917:23165662:1	22	`........`	15	100
ENST00000409689	GRCh37:7:23145914:23215007:1	25	`........`	18	100
ENST00000441490	GRCh37:15:78441733:78461385:1	257	`........`	264	100
ENST00000558535	GRCh37:15:78452312:78462884:1	307	`........`	314	100
ENST00000558602	GRCh37:15:78449265:78462013:1	894	`........`	901	100
ENST00000559803	GRCh37:15:78441722:78461308:1	268	`........`	275	100
ENST00000559889	GRCh37:15:78441720:78462016:1	1025	`........`	1032	100
ENST00000558509	GRCh37:15:78441719:78455905:1	271	`........`	278	100
ENST00000559881	GRCh37:15:78441719:78454652:1	543	`........`	550	100
ENST00000559865	GRCh37:15:78441719:78454034:1	526	`........`	533	100
ENST00000560396	GRCh37:15:78441715:78454110:1	365	`........`	372	100
ENST00000559186	GRCh37:15:78441710:78454110:1	626	`........`	633	100
ENST00000561279	GRCh37:15:78441704:78454709:1	317	`........`	324	100
ENST00000560667	GRCh37:15:78441702:78462057:1	658	`........`	665	100
ENST00000558933	GRCh37:15:78441668:78458542:1	322	`........`	329	100
ENST00000299518	GRCh37:15:78441663:78464291:1	442	`........`	449	100
ENST00000551727	GRCh37:12:104513133:104531795:-1	596	`........`	589	100
ENST00000539242	GRCh37:1:94027351:94050692:-1	1677	`........`	1670	100
ENST00000538653	GRCh37:1:94027678:94033684:-1	744	`........`	737	100
ENST00000370243	GRCh37:1:94027351:94146926:-1	2717	`........`	2710	100
ENST00000370244	GRCh37:1:94027348:94312706:-1	2731	`........`	2724	100
ENST00000260502	GRCh37:1:94027348:94147385:-1	2685	`........`	2678	100
ENST00000370247	GRCh37:1:94027347:94079654:-1	2336	`........`	2329	100
ENST00000430130	GRCh37:7:91774198:91794590:-1	2634	`........`	2641	100
ENST00000458448	GRCh37:7:91774156:91808447:-1	2761	`........`	2768	100
ENST00000238483	GRCh37:19:1450148:1473243:1	3995	`........`	4002	100
ENST00000233607	GRCh37:19:1450148:1473243:1	4817	`........`	4824	100
ENST00000535453	GRCh37:19:1451288:1473237:1	6322	`........`	6329	100
ENST00000398879	GRCh37:7:47314754:47579199:-1	1425	`........`	1432	100
ENST00000469470	GRCh37:7:47409094:47443022:-1	493	`........`	500	100
ENST00000450444	GRCh37:7:47408878:47578875:-1	1525	`........`	1532	100
ENST00000457718	GRCh37:7:47342565:47622156:-1	1454	`........`	1461	100
ENST00000311160	GRCh37:7:47314752:47621742:-1	1416	`........`	1423	100
ENST00000243344	GRCh37:2:166729872:166810353:-1	4577	`........`	4584	100
ENST00000417166	GRCh37:20:33104231:33123391:1	865	`........`	872	100
ENST00000307959	GRCh37:X:69488202:69501690:1	1153	`........`	1160	100
ENST00000539688	GRCh37:14:50064193:50065882:-1	512	`........`	519	100
ENST00000557111	GRCh37:14:50050297:50065408:-1	38	`........`	45	100
ENST00000493326	GRCh37:HSCHR6	1811	`........`	1818	100
ENST00000343380	GRCh37:20:32263489:32274210:-1	12	`........`	5	100
ENST00000459816	GRCh37:HSCHR6	612	`........`	619	100
ENST00000481309	GRCh37:HSCHR6	1035	`........`	1042	100
ENST00000416773	GRCh37:HSCHR6	1626	`........`	1633	100
ENST00000434226	GRCh37:HSCHR6	1688	`........`	1695	100
ENST00000312280	GRCh37:17:15133095:15168624:-1	1209	`........`	1216	100
ENST00000395938	GRCh37:17:15133095:15165906:-1	1216	`........`	1223	100
ENST00000359543	GRCh37:16:10622279:10674555:-1	2679	`........`	2686	100
ENST00000479674	GRCh37:13:113764654:113771149:1	56	`........`	63	100
ENST00000380989	GRCh37:10:3179922:3215003:-1	552	`........`	559	100
ENST00000451104	GRCh37:10:3180016:3214974:-1	420	`........`	427	100
ENST00000224949	GRCh37:10:3179922:3214999:-1	548	`........`	555	100
ENST00000199814	GRCh37:5:150070356:150080669:-1	21	`........`	14	100
ENST00000366577	GRCh37:1:236958610:237067281:1	8479	`........`	8486	100
ENST00000490339	GRCh37:1:236737296:236738075:-1	72	`........`	79	100
ENST00000366582	GRCh37:1:236712305:236767804:-1	3399	`........`	3406	100
ENST00000370641	GRCh37:1:84964012:84972248:-1	554	`........`	547	100
ENST00000370645	GRCh37:1:84964008:84972248:-1	420	`........`	413	100
ENST00000471439	GRCh37:9:79824404:79826533:1	241	`........`	248	100
ENST00000453260	GRCh37:1:6521540:6523407:-1	954	`........`	961	100
ENST00000510563	GRCh37:1:6521494:6526167:-1	1011	`........`	1018	100
ENST00000502730	GRCh37:1:6521494:6526167:-1	762	`........`	769	100
ENST00000502588	GRCh37:1:6521494:6526167:-1	876	`........`	883	100
ENST00000348333	GRCh37:1:6521494:6526167:-1	1043	`........`	1050	100
ENST00000351748	GRCh37:1:6521494:6526167:-1	629	`........`	636	100
ENST00000414040	GRCh37:1:6521494:6526167:-1	1122	`........`	1129	100
ENST00000351959	GRCh37:1:6521264:6526235:-1	1135	`........`	1142	100
ENST00000356876	GRCh37:1:6521211:6526255:-1	1266	`........`	1273	100
ENST00000377782	GRCh37:1:6521211:6526235:-1	1273	`........`	1280	100
ENST00000480393	GRCh37:1:6521211:6526235:-1	1347	`........`	1354	100
ENST00000485036	GRCh37:1:6521211:6526235:-1	1367	`........`	1374	100
ENST00000513135	GRCh37:1:6521211:6526159:-1	3124	`........`	3131	100
ENST00000473343	GRCh37:1:6521211:6523682:-1	1232	`........`	1239	100
ENST00000399770	GRCh37:4:42895284:43032675:1	506	`........`	499	100
ENST00000447157	GRCh37:2:220094618:220097269:1	32	`........`	39	100
ENST00000410034	GRCh37:2:220094610:220101371:1	40	`........`	47	100
ENST00000416565	GRCh37:2:220094607:220096735:1	43	`........`	50	100
ENST00000521856	GRCh37:8:55012910:55014488:-1	263	`........`	270	100
ENST00000514488	GRCh37:5:138630219:138643404:1	10	`........`	3	100
ENST00000373812	GRCh37:1:29063271:29096287:1	150	`........`	143	100
ENST00000545507	GRCh37:19:571305:583493:1	192	`........`	199	100
ENST00000346916	GRCh37:19:571297:583493:1	200	`........`	207	100
ENST00000265087	GRCh37:5:172741716:172756506:-1	245	`........`	238	100
ENST00000573570	GRCh37:HSCHR5	1419	`........`	1412	100
ENST00000573570	GRCh37:HSCHR5	205	`......._`	211	87
ENST00000575569	GRCh37:HSCHR5	2466	`........`	2459	100
ENST00000573110	GRCh37:HSCHR5	2537	`........`	2530	100
ENST00000585201	GRCh37:18:74690791:74701979:-1	4026	`........`	4033	100
ENST00000329003	GRCh37:17:74070875:74073622:1	962	`........`	969	100
ENST00000568142	GRCh37:16:31484755:31488123:1	1899	`........`	1892	100
ENST00000564176	GRCh37:16:31483492:31489279:1	3262	`........`	3255	100
ENST00000577571	GRCh37:HG1293	8	`........`	15	100
ENST00000382892	GRCh37:4:1894509:1983930:1	5112	`........`	5119	100
ENST00000382891	GRCh37:4:1894509:1983933:1	4937	`........`	4944	100
ENST00000482415	GRCh37:4:1941008:1981523:1	3415	`........`	3422	100
ENST00000382895	GRCh37:4:1894572:1983934:1	5229	`........`	5236	100
ENST00000312087	GRCh37:4:1894572:1983930:1	5456	`........`	5463	100
ENST00000353275	GRCh37:4:1894509:1983930:1	5386	`........`	5393	100
ENST00000347291	GRCh37:10:97071531:97321135:-1	280	`........`	287	100
ENST00000353505	GRCh37:10:97071531:97321135:-1	280	`........`	287	100
ENST00000393949	GRCh37:10:97071531:97321135:-1	280	`........`	287	100
ENST00000371246	GRCh37:10:97071531:97321135:-1	280	`........`	287	100
ENST00000371247	GRCh37:10:97071531:97321135:-1	280	`........`	287	100
ENST00000354106	GRCh37:10:97074816:97200892:-1	90	`........`	97	100
ENST00000371245	GRCh37:10:97074782:97200919:-1	117	`........`	124	100
ENST00000277982	GRCh37:10:97074782:97200919:-1	117	`........`	124	100
ENST00000361941	GRCh37:10:97074782:97200919:-1	117	`........`	124	100
ENST00000306402	GRCh37:10:97071530:97321171:-1	316	`........`	323	100
ENST00000371227	GRCh37:10:97071528:97321135:-1	280	`........`	287	100
ENST00000469311	GRCh37:HSCHR6	1811	`........`	1818	100
ENST00000468446	GRCh37:HSCHR6	612	`........`	619	100
ENST00000469920	GRCh37:HSCHR6	1035	`........`	1042	100
ENST00000435498	GRCh37:HSCHR6	1626	`........`	1633	100
ENST00000456968	GRCh37:HSCHR6	1688	`........`	1695	100
ENST00000343998	GRCh37:18:72102992:72124503:-1	1037	`........`	1030	100
ENST00000400291	GRCh37:18:72102963:72125179:-1	324	`........`	317	100
ENST00000403663	GRCh37:22:38142240:38170147:1	1732	`........`	1725	100
ENST00000344404	GRCh37:22:38093628:38170055:1	6800	`........`	6793	100
ENST00000406386	GRCh37:22:38093011:38172563:1	7121	`........`	7114	100
ENST00000455236	GRCh37:22:38082421:38170137:1	7528	`........`	7521	100
ENST00000575628	GRCh37:HG325	109	`........`	102	100
ENST00000572941	GRCh37:HG325	729	`........`	722	100
ENST00000574524	GRCh37:HG325	2358	`........`	2351	100
ENST00000570678	GRCh37:HG325	1369	`........`	1362	100
ENST00000574211	GRCh37:HG325	631	`........`	624	100
ENST00000570810	GRCh37:HG325	1005	`........`	998	100
ENST00000574039	GRCh37:HG325	1326	`........`	1319	100
ENST00000576852	GRCh37:HG325	606	`........`	599	100
ENST00000574925	GRCh37:HG325	926	`........`	919	100
ENST00000359218	GRCh37:2:179390716:179672150:-1	7898	`........`	7905	100
ENST00000359218	GRCh37:2:179390716:179672150:-1	247	`......._`	253	87
ENST00000359218	GRCh37:2:179390716:179672150:-1	15005	`......._`	14999	87
ENST00000359218	GRCh37:2:179390716:179672150:-1	56481	`......._`	56487	87
ENST00000359218	GRCh37:2:179390716:179672150:-1	78900	`......._`	78894	87
ENST00000359218	GRCh37:2:179390716:179672150:-1	82010	`......._`	82016	87
ENST00000342175	GRCh37:2:179390716:179672150:-1	7898	`........`	7905	100
ENST00000342175	GRCh37:2:179390716:179672150:-1	247	`......._`	253	87
ENST00000342175	GRCh37:2:179390716:179672150:-1	15206	`......._`	15200	87
ENST00000342175	GRCh37:2:179390716:179672150:-1	56682	`......._`	56688	87
ENST00000342175	GRCh37:2:179390716:179672150:-1	79101	`......._`	79095	87
ENST00000342175	GRCh37:2:179390716:179672150:-1	82211	`......._`	82217	87
ENST00000360870	GRCh37:2:179609132:179672148:-1	8034	`........`	8041	100
ENST00000360870	GRCh37:2:179609132:179672148:-1	245	`......._`	251	87
ENST00000591111	GRCh37:2:179390716:179672150:-1	8036	`........`	8043	100
ENST00000591111	GRCh37:2:179390716:179672150:-1	247	`......._`	253	87
ENST00000591111	GRCh37:2:179390716:179672150:-1	36902	`......._`	36896	87
ENST00000591111	GRCh37:2:179390716:179672150:-1	78378	`......._`	78384	87
ENST00000591111	GRCh37:2:179390716:179672150:-1	100797	`......._`	100791	87
ENST00000591111	GRCh37:2:179390716:179672150:-1	103907	`......._`	103913	87
ENST00000589042	GRCh37:2:179390716:179672150:-1	8036	`........`	8043	100
ENST00000589042	GRCh37:2:179390716:179672150:-1	247	`......._`	253	87
ENST00000589042	GRCh37:2:179390716:179672150:-1	41825	`......._`	41819	87
ENST00000589042	GRCh37:2:179390716:179672150:-1	83301	`......._`	83307	87
ENST00000589042	GRCh37:2:179390716:179672150:-1	105720	`......._`	105714	87
ENST00000589042	GRCh37:2:179390716:179672150:-1	108830	`......._`	108836	87
ENST00000460472	GRCh37:2:179390716:179672150:-1	7898	`........`	7905	100
ENST00000460472	GRCh37:2:179390716:179672150:-1	247	`......._`	253	87
ENST00000460472	GRCh37:2:179390716:179672150:-1	14630	`......._`	14624	87
ENST00000460472	GRCh37:2:179390716:179672150:-1	56106	`......._`	56112	87
ENST00000460472	GRCh37:2:179390716:179672150:-1	78525	`......._`	78519	87
ENST00000460472	GRCh37:2:179390716:179672150:-1	81635	`......._`	8164	87