VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>ebv-miR-bart4
gaccugau

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`gacctgat`	8
ENST00000576079	ENSG00000263092 transcript	106	`_........`	113	0
ENST00000574350	ENSG00000263180 transcript	191	`_........`	198	0
ENST00000573149	ENSG00000262055 transcript	61	`_........`	68	0
ENST00000573149	ENSG00000262055 transcript	807	`_......._`	813	0
ENST00000575520	ENSG00000262220 transcript	106	`_........`	113	0
ENST00000572423	ENSG00000262238 transcript	106	`_........`	113	0
ENST00000570824	ENSG00000262300 transcript	191	`_........`	198	0
ENST00000575545	ENSG00000262631 transcript	191	`_........`	198	0
ENST00000575488	ENSG00000262821 transcript	622	`_........`	615	0
ENST00000598151	ENSG00000268999 transcript	393	`_........`	400	0
ENST00000598151	ENSG00000268999 transcript	1509	`_......._`	1515	0
ENST00000597604	ENSG00000269447 transcript	1173	`_........`	1166	0
ENST00000597604	ENSG00000269447 transcript	271	`__.......`	265	0
ENST00000602196	ENSG00000268236 transcript	137	`_........`	144	0
ENST00000610151	ENSG00000273140 transcript	1179	`_........`	1172	0
ENST00000610151	ENSG00000273140 transcript	1194	`_......._`	1200	0
ENST00000608712	ENSG00000273422 transcript	135	`_........`	142	0
ENST00000597031	ENSG00000267887 transcript	854	`_........`	861	0
ENST00000597031	ENSG00000267887 transcript	574	`_......._`	580	0
ENST00000597031	ENSG00000267887 transcript	1251	`__.......`	1245	0
ENST00000595664	ENSG00000268917 transcript	296	`_........`	303	0
ENST00000595664	ENSG00000268917 transcript	686	`__.......`	680	0
ENST00000599383	ENSG00000268022 transcript	116	`_........`	123	0
ENST00000599383	ENSG00000268022 transcript	449	`__.......`	443	0
ENST00000601269	ENSG00000269683 transcript	279	`_........`	286	0
ENST00000601269	ENSG00000269683 transcript	617	`__.......`	611	0
ENST00000594495	ENSG00000267999 transcript	288	`_........`	295	0
ENST00000599623	ENSG00000269287 transcript	1182	`_........`	1189	0
ENST00000599623	ENSG00000269287 transcript	1589	`__.......`	1583	0
ENST00000603638	ENSG00000271487 transcript	106	`_........`	113	0
ENST00000605767	ENSG00000270338 transcript	191	`_........`	198	0
ENST00000596408	ENSG00000268893 transcript	374	`_........`	381	0
ENST00000593930	ENSG00000268703 transcript	21	`_........`	28	0
ENST00000601598	ENSG00000268727 transcript	378	`_........`	371	0
ENST00000599929	ENSG00000268448 transcript	293	`_........`	300	0
ENST00000599929	ENSG00000268448 transcript	681	`__.......`	675	0
ENST00000593295	ENSG00000269780 transcript	81	`_........`	88	0
ENST00000598524	ENSG00000268356 transcript	219	`_........`	212	0
ENST00000594048	ENSG00000269513 transcript	97	`_........`	104	0
ENST00000598176	ENSG00000268284 transcript	55	`_........`	62	0
ENST00000578771	ENSG00000265397 transcript	1439	`_........`	1446	0
ENST00000607863	ENSG00000271812 transcript	155	`_........`	148	0
ENST00000426703	ENSG00000224752 transcript	158	`_........`	165	0
ENST00000425215	ENSG00000233121 transcript	193	`_........`	200	0
ENST00000423801	ENSG00000184423 transcript	387	`_........`	394	0
ENST00000457911	ENSG00000241717 transcript	894	`_........`	901	0
ENST00000417863	ENSG00000215268 transcript	1713	`_........`	1706	0
ENST00000417863	ENSG00000215268 transcript	144	`__.......`	150	0
ENST00000417863	ENSG00000215268 transcript	1207	`__.......`	1213	0
ENST00000314015	ENSG00000181791 transcript	302	`_........`	295	0
ENST00000545636	ENSG00000233614 transcript	398	`_........`	391	0
ENST00000430178	ENSG00000233614 transcript	90	`_........`	83	0
ENST00000513886	GRCh37:16:61555:64090:1	396	`_........`	389	0
ENST00000575355	ENSG00000261853 transcript	769	`_........`	762	0
ENST00000572038	ENSG00000261885 transcript	769	`_........`	762	0
ENST00000570544	ENSG00000263017 transcript	66	`_........`	73	0
ENST00000568946	GRCh37:17:657549:658128:1	39	`_........`	32	0
ENST00000449830	GRCh37:17:655907:658128:1	375	`_........`	368	0
ENST00000536214	GRCh37:17:655900:658576:1	1764	`_........`	1757	0
ENST00000518655	ENSG00000223972 transcript	414	`_........`	407	0
ENST00000515242	ENSG00000223972 transcript	398	`_........`	391	0
ENST00000450305	ENSG00000223972 transcript	139	`_........`	132	0
ENST00000456328	GRCh37:1:11869:14409:1	401	`_........`	394	0
ENST00000535136	ENSG00000256981 transcript	769	`_........`	762	0
ENST00000562223	ENSG00000261545 transcript	102	`_........`	95	0
ENST00000417432	ENSG00000236704 transcript	14	`_........`	7	0
ENST00000290818	ENSG00000214826 transcript	2665	`_........`	2658	0
ENST00000290818	ENSG00000214826 transcript	1441	`__.......`	1447	0
ENST00000290818	ENSG00000214826 transcript	1561	`__.......`	1567	0
ENST00000432996	ENSG00000214826 transcript	2604	`_........`	2597	0
ENST00000432996	ENSG00000214826 transcript	1325	`__.......`	1331	0
ENST00000432996	ENSG00000214826 transcript	1445	`__.......`	1451	0
ENST00000415169	ENSG00000111788 transcript	1346	`_........`	1339	0
ENST00000341155	ENSG00000111788 transcript	2658	`_........`	2651	0
ENST00000341155	ENSG00000111788 transcript	1440	`__.......`	1446	0
ENST00000341155	ENSG00000111788 transcript	1560	`__.......`	1566	0
ENST00000539757	ENSG00000111788 transcript	2744	`_........`	2737	0
ENST00000539757	ENSG00000111788 transcript	1377	`__.......`	1383	0
ENST00000539757	ENSG00000111788 transcript	1497	`__.......`	1503	0
ENST00000452496	ENSG00000237437 transcript	378	`_........`	371	0
ENST00000452496	ENSG00000237437 transcript	475	`_........`	482	0
ENST00000414056	ENSG00000237434 transcript	548	`_........`	541	0
ENST00000414056	ENSG00000237434 transcript	595	`_......._`	589	0
ENST00000456661	ENSG00000228166 transcript	42	`_........`	49	0
ENST00000570744	ENSG00000262148 transcript	451	`_........`	444	0
ENST00000426146	ENSG00000236875 transcript	414	`_........`	407	0
ENST00000421620	ENSG00000236875 transcript	159	`_........`	152	0
ENST00000414503	ENSG00000234643 transcript	561	`_........`	568	0
ENST00000537214	ENSG00000255996 transcript	79	`_........`	86	0
ENST00000576567	ENSG00000262915 transcript	969	`_........`	962	0
ENST00000585516	ENSG00000267756 transcript	642	`_........`	649	0
ENST00000585516	ENSG00000267756 transcript	354	`_......._`	360	0
ENST00000585516	ENSG00000267756 transcript	711	`_......._`	717	0
ENST00000237841	ENSG00000118976 transcript	1588	`_........`	1595	0
ENST00000237841	ENSG00000118976 transcript	1103	`__.......`	1109	0
ENST00000582279	ENSG00000266127 transcript	98	`_........`	105	0
ENST00000582279	ENSG00000266127 transcript	934	`__.......`	928	0
ENST00000369958	ENSG00000215719 transcript	565	`_........`	572	0
ENST00000535849	ENSG00000256263 transcript	91	`_........`	84	0
ENST00000571755	ENSG00000262081 transcript	495	`_........`	488	0
ENST00000571755	ENSG00000262081 transcript	1102	`_......._`	1108	0
ENST00000509020	ENSG00000249863 transcript	11	`_........`	4	0
ENST00000508566	ENSG00000250040 transcript	1017	`_........`	1010	0
ENST00000453465	ENSG00000223984 transcript	206	`_........`	213	0
ENST00000453465	ENSG00000223984 transcript	684	`__.......`	690	0
ENST00000453465	ENSG00000223984 transcript	1536	`__.......`	1542	0
ENST00000600506	ENSG00000269153 transcript	227	`_........`	234	0
ENST00000422830	ENSG00000223418 transcript	707	`_........`	714	0
ENST00000594355	ENSG00000268742 transcript	322	`_........`	315	0
ENST00000398732	ENSG00000198155 transcript	135	`_........`	142	0
ENST00000434972	ENSG00000238193 transcript	234	`_........`	241	0
ENST00000550624	ENSG00000232639 transcript	229	`_........`	236	0
ENST00000419760	ENSG00000232639 transcript	229	`_........`	236	0
ENST00000438377	ENSG00000236374 transcript	39	`_........`	46	0
ENST00000413367	ENSG00000232007 transcript	143	`_........`	150	0
ENST00000443307	ENSG00000226993 transcript	143	`_........`	150	0
ENST00000467363	ENSG00000240097 transcript	96	`_........`	103	0
ENST00000467363	ENSG00000240097 transcript	283	`_......._`	289	0
ENST00000420888	ENSG00000227982 transcript	327	`_........`	320	0
ENST00000573797	ENSG00000262027 transcript	1081	`_........`	1074	0
ENST00000459980	ENSG00000242142 transcript	11	`_........`	18	0
ENST00000427378	ENSG00000223500 transcript	725	`_........`	732	0
ENST00000427378	ENSG00000223500 transcript	661	`_......._`	655	0
ENST00000438972	ENSG00000236386 transcript	98	`_........`	91	0
ENST00000574657	ENSG00000262500 transcript	55	`_........`	62	0
ENST00000464731	ENSG00000239443 transcript	128	`_........`	135	0
ENST00000546698	ENSG00000257296 transcript	329	`_........`	336	0
ENST00000528049	ENSG00000254912 transcript	1214	`_........`	1207	0
ENST00000443385	ENSG00000224947 transcript	10	`_........`	17	0
ENST00000580257	ENSG00000263503 transcript	55	`_........`	62	0
ENST00000564149	ENSG00000261491 transcript	644	`_........`	637	0
ENST00000398305	ENSG00000214425 transcript	1076	`_........`	1069	0
ENST00000563586	ENSG00000260897 transcript	405	`_........`	398	0
ENST00000441962	ENSG00000237618 transcript	451	`_........`	458	0
ENST00000441215	ENSG00000226521 transcript	822	`_........`	815	0
ENST00000567691	ENSG00000261041 transcript	622	`_........`	615	0
ENST00000552969	ENSG00000217281 transcript	160	`_........`	167	0
ENST00000406789	ENSG00000217281 transcript	229	`_........`	236	0
ENST00000421633	ENSG00000230936 transcript	2151	`_........`	2144	0
ENST00000421633	ENSG00000230936 transcript	1711	`_......._`	1717	0
ENST00000416871	ENSG00000237911 transcript	127	`_........`	134	0
ENST00000583574	GRCh37:17:20318860:20327955:1	213	`_........`	206	0
ENST00000361500	ENSG00000198923 transcript	45	`_........`	38	0
ENST00000552179	ENSG00000198923 transcript	49	`_........`	42	0
ENST00000562736	ENSG00000260399 transcript	682	`_........`	675	0
ENST00000404155	ENSG00000216819 transcript	228	`_........`	221	0
ENST00000434698	ENSG00000227249 transcript	1081	`_........`	1088	0
ENST00000425589	ENSG00000232976 transcript	544	`_........`	537	0
ENST00000461599	ENSG00000241627 transcript	639	`_........`	646	0
ENST00000557027	ENSG00000258797 transcript	666	`_........`	659	0
ENST00000550293	ENSG00000257802 transcript	1163	`_........`	1170	0
ENST00000464192	ENSG00000241218 transcript	114	`_........`	121	0
ENST00000421118	ENSG00000215583 transcript	378	`_........`	371	0
ENST00000421118	ENSG00000215583 transcript	632	`_......._`	638	0
ENST00000430515	ENSG00000234805 transcript	36	`_........`	29	0
ENST00000563212	ENSG00000261585 transcript	326	`_........`	319	0