VIRmiRNA | Resource for experimental viral miRNA and their targets

Predicted targets for your query miRNA sequence
>kshv-miR-k12-5*
gguaguc

RED	=100 % Complementary sequence
.	=Identical residue
blue alphabets	=mismatch
_	=Gap

Acc number	Gene	Start	Alignment	End	% Identity
Query		1	`ggtagtc`	7
ENST00000573821	ENSG00000263209 transcript	634	`_.......`	640	100
ENST00000593689	ENSG00000269769 transcript	184	`_.......`	178	100
ENST00000601316	ENSG00000273022 transcript	111	`_.......`	105	100
ENST00000601944	ENSG00000273041 transcript	111	`_.......`	105	100
ENST00000609136	ENSG00000273339 transcript	1215	`_.......`	1209	100
ENST00000600662	ENSG00000269659 transcript	207	`_.......`	201	100
ENST00000595037	ENSG00000268048 transcript	118	`_.......`	112	100
ENST00000610173	ENSG00000273161 transcript	394	`_.......`	388	100
ENST00000593505	ENSG00000268425 transcript	416	`_.......`	422	100
ENST00000599623	ENSG00000269287 transcript	1440	`_.......`	1434	100
ENST00000600939	GRCh37:HG1436	898	`_.......`	904	100
ENST00000596429	ENSG00000268625 transcript	1126	`_.......`	1120	100
ENST00000599502	ENSG00000268625 transcript	1510	`_.......`	1504	100
ENST00000577792	ENSG00000266845 transcript	136	`_.......`	130	100
ENST00000596197	ENSG00000268389 transcript	819	`_.......`	813	100
ENST00000598888	ENSG00000269183 transcript	313	`_.......`	307	100
ENST00000594757	ENSG00000268045 transcript	432	`_.......`	438	100
ENST00000598528	ENSG00000269212 transcript	23	`_.......`	29	100
ENST00000594789	ENSG00000268169 transcript	457	`_.......`	451	100
ENST00000601690	ENSG00000268502 transcript	43	`_.......`	37	100
ENST00000561939	ENSG00000259927 transcript	591	`_.......`	585	100
ENST00000575410	ENSG00000261952 transcript	43	`_.......`	37	100
ENST00000570866	ENSG00000261952 transcript	795	`_.......`	789	100
ENST00000584800	ENSG00000264683 transcript	12	`_.......`	6	100
ENST00000502451	GRCh37:3:13974553:13978444:1	609	`_.......`	603	100
ENST00000423183	ENSG00000226642 transcript	607	`_.......`	601	100
ENST00000605193	ENSG00000270531 transcript	234	`_.......`	228	100
ENST00000421291	ENSG00000236152 transcript	39	`_.......`	45	100
ENST00000441772	ENSG00000230080 transcript	552	`_.......`	546	100
ENST00000421366	ENSG00000226444 transcript	968	`_.......`	962	100
ENST00000417657	ENSG00000241838 transcript	566	`_.......`	560	100
ENST00000440946	GRCh37:22:16162066:16172700:1	371	`_.......`	365	100
ENST00000609679	GRCh37:22:16157079:16172151:1	312	`_.......`	306	100
ENST00000561757	ENSG00000260991 transcript	258	`_.......`	252	100
ENST00000576249	ENSG00000262961 transcript	249	`_.......`	243	100
ENST00000471244	GRCh37:7:5033140:5037798:1	3013	`_.......`	3007	100
ENST00000404006	GRCh37:7:5013668:5037796:1	1584	`_.......`	1578	100
ENST00000404404	ENSG00000196204 transcript	1806	`_.......`	1800	100
ENST00000605785	ENSG00000270282 transcript	307	`_.......`	301	100
ENST00000538670	ENSG00000183935 transcript	980	`_.......`	974	100
ENST00000445147	ENSG00000225777 transcript	745	`_.......`	739	100
ENST00000505183	ENSG00000215571 transcript	549	`_.......`	543	100
ENST00000400595	ENSG00000215571 transcript	485	`_.......`	479	100
ENST00000446672	ENSG00000224976 transcript	2634	`_.......`	2628	100
ENST00000454044	ENSG00000237636 transcript	983	`_.......`	989	100
ENST00000448968	ENSG00000256817 transcript	436	`_.......`	430	100
ENST00000435838	ENSG00000239392 transcript	13	`_.......`	7	100
ENST00000435838	ENSG00000239392 transcript	697	`_.......`	691	100
ENST00000426153	ENSG00000231991 transcript	1031	`_.......`	1025	100
ENST00000435128	ENSG00000231991 transcript	982	`_.......`	976	100
ENST00000437882	ENSG00000254016 transcript	101	`_.......`	95	100
ENST00000366466	ENSG00000203659 transcript	480	`_.......`	486	100
ENST00000433383	ENSG00000225735 transcript	790	`_.......`	784	100
ENST00000423965	ENSG00000232000 transcript	857	`_.......`	851	100
ENST00000468816	ENSG00000239701 transcript	118	`_.......`	112	100
ENST00000413888	ENSG00000230207 transcript	456	`_.......`	462	100
ENST00000446382	ENSG00000230581 transcript	560	`_.......`	554	100
ENST00000414230	ENSG00000231108 transcript	182	`_.......`	176	100
ENST00000442675	ENSG00000234534 transcript	670	`_.......`	664	100
ENST00000450880	ENSG00000233442 transcript	357	`_.......`	351	100
ENST00000474011	GRCh37:21:11059928:11098980:-1	1243	`_.......`	1237	100
ENST00000541242	ENSG00000256913 transcript	1485	`_.......`	1479	100
ENST00000580616	ENSG00000263748 transcript	311	`_.......`	317	100
ENST00000592985	ENSG00000267324 transcript	347	`_.......`	341	100
ENST00000586090	ENSG00000267704 transcript	1488	`_.......`	1482	100
ENST00000588786	ENSG00000257513 transcript	576	`_.......`	570	100
ENST00000547442	GRCh37:18:11619508:11639698:-1	671	`_.......`	665	100
ENST00000411881	ENSG00000225212 transcript	289	`_.......`	283	100
ENST00000584733	ENSG00000225212 transcript	294	`_.......`	288	100
ENST00000414660	ENSG00000233543 transcript	483	`_.......`	489	100
ENST00000414660	ENSG00000233543 transcript	1244	`_.......`	1238	100
ENST00000445028	ENSG00000237206 transcript	13	`_.......`	7	100
ENST00000445028	ENSG00000237206 transcript	710	`_.......`	704	100
ENST00000418838	ENSG00000214045 transcript	13	`_.......`	7	100
ENST00000418838	ENSG00000214045 transcript	699	`_.......`	693	100
ENST00000428234	ENSG00000233007 transcript	1997	`_.......`	1991	100
ENST00000413104	ENSG00000241607 transcript	457	`_.......`	451	100
ENST00000418104	ENSG00000231069 transcript	43	`_.......`	37	100
ENST00000510977	ENSG00000248654 transcript	225	`_.......`	231	100
ENST00000512421	ENSG00000251338 transcript	825	`_.......`	819	100
ENST00000590455	ENSG00000267544 transcript	386	`_.......`	380	100
ENST00000503331	ENSG00000251087 transcript	434	`_.......`	428	100
ENST00000468675	ENSG00000244004 transcript	389	`_.......`	383	100
ENST00000514230	ENSG00000250268 transcript	100	`_.......`	94	100
ENST00000442655	ENSG00000251313 transcript	389	`_.......`	383	100
ENST00000380331	GRCh37:X:15694417:15715583:1	527	`_.......`	521	100
ENST00000380336	GRCh37:X:15693055:15715874:1	425	`_.......`	419	100
ENST00000448018	ENSG00000235929 transcript	450	`_.......`	444	100
ENST00000416702	ENSG00000228753 transcript	634	`_.......`	628	100
ENST00000485355	ENSG00000243894 transcript	389	`_.......`	383	100
ENST00000546233	ENSG00000251271 transcript	123	`_.......`	117	100
ENST00000502317	ENSG00000251271 transcript	434	`_.......`	428	100
ENST00000508865	ENSG00000251229 transcript	597	`_.......`	591	100
ENST00000434972	ENSG00000238193 transcript	9	`_.......`	3	100
ENST00000445338	ENSG00000227474 transcript	811	`_.......`	805	100
ENST00000442900	ENSG00000228330 transcript	785	`_.......`	779	100
ENST00000400789	ENSG00000215713 transcript	986	`_.......`	980	100
ENST00000589981	ENSG00000267447 transcript	529	`_.......`	535	100
ENST00000423417	ENSG00000234328 transcript	998	`_.......`	992	100
ENST00000515427	ENSG00000248352 transcript	998	`_.......`	992	100
ENST00000437728	ENSG00000237818 transcript	384	`_.......`	378	100
ENST00000489624	ENSG00000241788 transcript	70	`_.......`	64	100
ENST00000411660	ENSG00000232385 transcript	390	`_.......`	384	100
ENST00000497494	GRCh37:HSCHR6	2567	`_.......`	2573	100
ENST00000497494	GRCh37:HSCHR6	4242	`_.......`	4248	100
ENST00000454847	ENSG00000229364 transcript	12	`_.......`	6	100
ENST00000603580	ENSG00000270812 transcript	640	`_.......`	646	100
ENST00000416813	ENSG00000234992 transcript	886	`_.......`	892	100
ENST00000468910	ENSG00000242456 transcript	459	`_.......`	465	100
ENST00000476982	GRCh37:HSCHR6	2567	`_.......`	2573	100
ENST00000476982	GRCh37:HSCHR6	4242	`_.......`	4248	100
ENST00000578578	ENSG00000265480 transcript	1481	`_.......`	1475	100
ENST00000577198	GRCh37:17:26603012:26634408:-1	1826	`_.......`	1820	100
ENST00000523006	ENSG00000254270 transcript	34	`_.......`	28	100
ENST00000604387	ENSG00000271404 transcript	217	`_.......`	211	100
ENST00000399037	ENSG00000214815 transcript	14	`_.......`	8	100
ENST00000399037	ENSG00000214815 transcript	711	`_.......`	705	100
ENST00000437975	ENSG00000228891 transcript	12	`_.......`	6	100
ENST00000482187	GRCh37:HSCHR6	2563	`_.......`	2569	100
ENST00000482187	GRCh37:HSCHR6	4242	`_.......`	4248	100
ENST00000418112	ENSG00000233951 transcript	1177	`_.......`	1183	100
ENST00000424172	ENSG00000225274 transcript	886	`_.......`	892	100
ENST00000582878	ENSG00000265683 transcript	370	`_.......`	376	100
ENST00000463573	ENSG00000240103 transcript	1317	`_.......`	1311	100
ENST00000437174	ENSG00000233241 transcript	12	`_.......`	6	100
ENST00000482834	ENSG00000242017 transcript	459	`_.......`	453	100
ENST00000549824	ENSG00000257675 transcript	1239	`_.......`	1245	100
ENST00000550077	ENSG00000257343 transcript	425	`_.......`	419	100
ENST00000559548	ENSG00000259516 transcript	394	`_.......`	388	100
ENST00000560832	GRCh37:15:35474000:35530398:1	596	`_.......`	590	100
ENST00000565286	ENSG00000259892 transcript	478	`_.......`	472	100
ENST00000562061	ENSG00000261081 transcript	501	`_.......`	495	100
ENST00000567861	ENSG00000260639 transcript	13	`_.......`	19	100
ENST00000453064	ENSG00000213542 transcript	394	`_.......`	388	100
ENST00000530020	ENSG00000215296 transcript	453	`_.......`	447	100
ENST00000473622	ENSG00000243154 transcript	626	`_.......`	620	100
ENST00000438030	ENSG00000225244 transcript	283	`_.......`	277	100
ENST00000429248	ENSG00000228303 transcript	351	`_.......`	345	100
ENST00000571381	ENSG00000263127 transcript	456	`_.......`	462	100
ENST00000435487	ENSG00000213650 transcript	303	`_.......`	297	100
ENST00000568218	ENSG00000260211 transcript	1577	`_.......`	1571	100
ENST00000458553	ENSG00000237698 transcript	886	`_.......`	892	100
ENST00000496868	ENSG00000240452 transcript	82	`_.......`	76	100
ENST00000357829	ENSG00000196095 transcript	76	`_.......`	70	100
ENST00000475397	ENSG00000242829 transcript	246	`_.......`	252	100
ENST00000569415	ENSG00000259993 transcript	1595	`_.......`	1589	100
ENST00000419176	ENSG00000227583 transcript	349	`_.......`	343	100
ENST00000415623	ENSG00000234806 transcript	207	`_.......`	213	100
ENST00000556211	ENSG00000259090 transcript	442	`_.......`	436	100
ENST00000411536	ENSG00000234888 transcript	532	`_.......`	538	100
ENST00000340731	ENSG00000188013 transcript	752	`_.......`	746	100
ENST00000418141	ENSG00000188013 transcript	517	`_.......`	511	100
ENST00000412737	ENSG00000223655 transcript	412	`_.......`	406	100
ENST00000404883	ENSG00000216740 transcript	974	`_.......`	968	100
ENST00000418663	GRCh37:7:76178677:76257299:1	1775	`_.......`	1781	100
ENST00000452321	ENSG00000235697 transcript	12	`_.......`	6	100
ENST00000547726	ENSG00000257851 transcript	118	`_.......`	124	100
ENST00000445598	ENSG00000227576 transcript	886	`_.......`	892	100
ENST00000473625	ENSG00000240487 transcript	291	`_.......`	285	100
ENST00000436471	ENSG00000229586 transcript	1392	`_.......`	1398	100
ENST00000548926	ENSG00000258090 transcript	154	`_.......`	148	100
ENST00000548666	ENSG00000257531 transcript	257	`_.......`	263	100
ENST00000558708	ENSG00000259401 transcript	492	`_.......`	498	100
ENST00000559508	ENSG00000259325 transcript	1055	`_.......`	1049	100
ENST00000464555	ENSG00000239439 transcript	299	`_.......`	293	100
ENST00000431957	ENSG00000236105 transcript	184	`_.......`	178	100
ENST00000557130	ENSG00000258648 transcript	267	`_.......`	261	100
ENST00000553429	ENSG00000259098 transcript	382	`_.......`	376	100
ENST00000440402	ENSG00000223978 transcript	154	`_.......`	148	100
ENST00000416040	ENSG00000226270 transcript	121	`_.......`	115	100
ENST00000443269	ENSG00000214765 transcript	507	`_.......`	501	100
ENST00000417129	ENSG00000214765 transcript	507	`_.......`	501	100
ENST00000450436	GRCh37:7:45797710:45808584:-1	581	`_.......`	575	100
ENST00000428867	GRCh37:7:45797583:45799071:-1	446	`_.......`	440	100
ENST00000398921	ENSG00000214765 transcript	255	`_.......`	249	100
ENST00000428414	GRCh37:7:45763649:45808563:-1	453	`_.......`	447	100
ENST00000338231	GRCh37:7:45763387:45797776:-1	47	`_.......`	41	100
ENST00000429741	GRCh37:7:45763386:45808553:-1	443	`_.......`	437	100
ENST00000452645	ENSG00000235462 transcript	608	`_.......`	614	100
ENST00000430462	ENSG00000225014 transcript	984	`_.......`	978	100
ENST00000551045	ENSG00000258051 transcript	201	`_.......`	195	100
ENST00000554414	ENSG00000258916 transcript	1858	`_.......`	1852	100
ENST00000429190	ENSG00000227351 transcript	677	`_.......`	683	100
ENST00000449393	ENSG00000232910 transcript	412	`_.......`	406	100
ENST00000451650	ENSG00000229515 transcript	1021	`_.......`	1015	100
ENST00000425115	ENSG00000235805 transcript	1239	`_.......`	1233	100
ENST00000553295	ENSG00000259161 transcript	115	`_.......`	121	100
ENST00000498401	ENSG00000242488 transcript	513	`_.......`	507	100
ENST00000547831	ENSG00000257915 transcript	953	`_.......`	959	100
ENST00000425052	ENSG00000232888 transcript	277	`_.......`	271	100
ENST00000488441	ENSG00000232888 transcript	277	`_.......`	271	100
ENST00000418645	ENSG00000241057 transcript	605	`_.......`	599	100
ENST00000420114	ENSG00000183604 transcript	2801	`_.......`	2795	100
ENST00000467245	GRCh37:17:41277661:41305688:1	765	`_.......`	771	100
ENST00000356906	GRCh37:17:41277657:41292350:1	257	`_.......`	263	100
ENST00000460115	GRCh37:17:41277627:41297130:1	287	`_.......`	293	100
ENST00000569586	GRCh37:17:41017939:41019723:1	20	`_.......`	14	100
ENST00000601986	ENSG00000162685 transcript	1848	`_.......`	1854	100
ENST00000478559	ENSG00000240107 transcript	1462	`_.......`	1456	100
ENST00000366223	ENSG00000203401 transcript	321	`_.......`	327	100
ENST00000557330	ENSG00000258972 transcript	227	`_.......`	221	100
ENST00000554385	ENSG00000258448 transcript	177	`_.......`	183	100
ENST00000454683	ENSG00000226469 transcript	1886	`_.......`	1892	100
ENST00000481005	ENSG00000241825 transcript	601	`_.......`	595	100
ENST00000434110	ENSG00000225466 transcript	531	`_.......`	537	100
ENST00000416956	ENSG00000205936 transcript	447	`_.......`	441	100
ENST00000428264	ENSG00000233126 transcript	307	`_.......`	301	100
ENST00000411631	ENSG00000205578 transcript	43	`_.......`	37	100
ENST00000380760	ENSG00000205578 transcript	795	`_.......`	789	100
ENST00000458096	ENSG00000225354 transcript	571	`_.......`	577	100
ENST00000569730	ENSG00000260413 transcript	144	`_.......`	138	100
ENST00000441847	ENSG00000229572 transcript	584	`_.......`	578	100
ENST00000216407	ENSG00000256075 transcript	37	`_.......`	31	100
ENST00000422912	ENSG00000224136 transcript	43	`_.......`	49	100
ENST00000422912	ENSG00000224136 transcript	202	`_.......`	196	100
ENST00000567492	ENSG00000261137 transcript	283	`_.......`	277	100
ENST00000606840	ENSG00000225766 transcript	177	`_.......`	183	100
ENST00000397065	ENSG00000225766 transcript	177	`_.......`	183	100
ENST00000558622	GRCh37:14:24505710:24520110:1	387	`_.......`	381	100
ENST00000558682	GRCh37:14:24505686:24507263:1	201	`_.......`	207	100
ENST00000558293	GRCh37:14:24505662:24520237:1	435	`_.......`	429	100
ENST00000559270	GRCh37:14:24505662:24520237:1	435	`_.......`	429	100
ENST00000574286	ENSG00000262987 transcript	460	`_.......`	454	100
ENST00000565732	ENSG00000260250 transcript	463	`_.......`	457	100
ENST00000442978	ENSG00000227995 transcript	31	`_.......`	25	100
ENST00000486987	ENSG00000241305 transcript	735	`_.......`	729	100
ENST00000557705	ENSG00000259043 transcript	518	`_.......`	512	100
ENST00000554427	ENSG00000259079 transcript	11	`_.......`	5	100
ENST00000469999	ENSG00000241007 transcript	255	`_.......`	249	100
ENST00000589904	ENSG00000267472 transcript	324	`_.......`	318	100
ENST00000589904	ENSG00000267472 transcript	498	`_.......`	492	100
ENST00000590010	ENSG00000267352 transcript	670	`_.......`	664	100
ENST00000417699	ENSG00000230476 transcript	536	`_.......`	542	100
ENST00000426249	ENSG00000230662 transcript	1404	`_.......`	1410	100
ENST00000434308	ENSG00000230025 transcript	171	`_.......`	165	100
ENST00000414479	ENSG00000229568 transcript	194	`_.......`	188	100
ENST00000604334	ENSG00000271629 transcript	345	`_.......`	339	100
ENST00000430907	ENSG00000223361 transcript	41	`_.......`	35	100
ENST00000401830	GRCh37:5:17353804:17354733:-1	241	`_.......`	235	100
ENST00000436164	ENSG00000213729 transcript	222	`_.......`	228	100
ENST00000366439	ENSG00000203632 transcript	1825	`_.......`	1819	100
ENST00000449148	ENSG00000231159 transcript	534	`_.......`	540	100
ENST00000550858	ENSG00000257674 transcript	136	`_.......`	130	100
ENST00000436669	ENSG00000225022 transcript	181	`_.......`	175	100
ENST00000548873	ENSG00000257281 transcript	259	`_.......`	253	100
ENST00000432906	ENSG00000230356 transcript	28	`_.......`	22	100
ENST00000453728	ENSG00000233292 transcript	127	`_.......`	133	100
ENST00000543702	GRCh37:16:21892076:21893548:-1	97	`_.......`	103	100
ENST00000418183	ENSG00000228000 transcript	257	`_.......`	251	100
ENST00000502314	ENSG00000250444 transcript	325	`_.......`	331	100
ENST00000343743	ENSG00000182965 transcript	205	`_.......`	211	100
ENST00000565421	GRCh37:16:53400826:53405041:-1	1719	`_.......`	1725	100
ENST00000413552	ENSG00000234358 transcript	373	`_.......`	367	100
ENST00000496596	ENSG00000240954 transcript	456	`_.......`	462	100
ENST00000545836	ENSG00000255664 transcript	246	`_.......`	240	100
ENST00000423783	ENSG00000226359 transcript	332	`_.......`	326	100
ENST00000597330	ENSG00000268660 transcript	78	`_.......`	84	100
ENST00000603829	ENSG00000270804 transcript	258	`_.......`	252	100
ENST00000604665	GRCh37:19:58379253:58380143:1	343	`_.......`	337	100
ENST00000422893	ENSG00000236870 transcript	337	`_.......`	331	100
ENST00000555477	ENSG00000258722 transcript	1184	`_.......`	1178	100
ENST00000414449	ENSG00000229031 transcript	525	`_.......`	531	100
ENST00000439586	ENSG00000239893 transcript	252	`_.......`	246	100
ENST00000451913	ENSG00000244246 transcript	79	`_.......`	73	100
ENST00000415010	ENSG00000215603 transcript	127	`_.......`	121	100
ENST00000451822	ENSG00000232460 transcript	83	`_.......`	77	100
ENST00000527904	ENSG00000232460 transcript	85	`_.......`	79	100
ENST00000554374	ENSG00000259078 transcript	821	`_.......`	815	100
ENST00000485881	ENSG00000241478 transcript	712	`_.......`	706	100
ENST00000397978	ENSG00000249715 transcript	536	`_.......`	530	100
ENST00000397978	ENSG00000249715 transcript	1673	`_.......`	1667	100
ENST00000436930	ENSG00000249715 transcript	909	`_.......`	915	100
ENST00000436930	ENSG00000249715 transcript	3820	`_.......`	3814	100
ENST00000436930	ENSG00000249715 transcript	4348	`_.......`	4342	100
ENST00000436930	ENSG00000249715 transcript	5482	`_.......`	5476	100
ENST00000414152	ENSG00000249715 transcript	903	`_.......`	909	100
ENST00000414152	ENSG00000249715 transcript	4306	`_.......`	4300	100
ENST00000414152	ENSG00000249715 transcript	5470	`_.......`	5464	100