Genomes

Sequencing, Assembling & Annotation of Genomes

OrganismDescriptionInstitutePublication
Rhodococcus pyridinivorans strain KG-16 Draft genome sequence of a versatile hydrocarbon-degrading bacterium, Rhodococcus pyridinivorans strain KG-16, collected from oilfields in India.CSIR-CCMB 26868394
Cyanobacterium Scytonema tolypothrichoides VB-61278 Deciphering the Genome Sequences of the Hydrophobic Cyanobacterium Scytonema tolypothrichoides VB-61278. CSIR-IICB 25838486
Cyanobacterium Tolypothrix campylonemoides Strain VB511288 Draft Genome Sequence of Bioactive-Compound-Producing Cyanobacterium Tolypothrix campylonemoides Strain VB511288.CSIR-IICB 25838485
Cyanobacterium Hassallia byssoidea Strain VB512170 Draft Genome Sequence of Cyanobacterium Hassallia byssoidea Strain VB512170, Isolated from Monuments in India. CSIR-IICB 25745001
Cyanobacterium Aphanocapsa montana BDHKU 210001 Draft Genome Sequence of Exopolysaccharide-Producing Cyanobacterium Aphanocapsa montana BDHKU 210001. CSIR-IICB 25744997
Cyanobacterium Lyngbya confervoides Strain BDU141951 Draft Genome Sequence of Filamentous Marine Cyanobacterium Lyngbya confervoides Strain BDU141951.CSIR-IICB 25745003
Pseudomonas putida strain KG-4 Draft genome sequence of hydrocarbon-degrading Pseudomonas putida strain KG-4, isolated from soil samples collected from Krishna - Godavari basin in India.CSIR-CCMB 26044433
Lactobacillus casei Lbs2 Draft Genome Sequence of Lactobacillus casei Lbs2CSIR-IICB 2554034
Rhodococcus rhodochrous strain KG-21 Draft genome sequence of Rhodococcus rhodochrous strain KG-21, a soil isolate from oil fields of Krishna-Godavari basin, India CSIR-CCMB 26472842
Cyanobacterium Scytonema millei VB511283 Draft Genome Sequence of the Terrestrial Cyanobacterium Scytonema millei VB511283, Isolated from Eastern India.CSIR-IICB 25744984
Tolypothrix boutellei Strain VB521301 Draft Genome Sequence of Tolypothrix boutellei Strain VB521301. CSIR-IICB 25700407
Pseudomonas aeruginosa from keratitis patient Draft genome sequences of two drug-resistant isolates of Pseudomonas aeruginosa obtained from keratitis patients in India.1CSIR-CCMB 25573941
Pseudomonas aeruginosa from keratitis patient Draft genome sequences of two drug-resistant isolates of Pseudomonas aeruginosa obtained from keratitis patients in India.CSIR-CCMB/IMTech 25573941
Rhodosporidium toruloides MTCC 457Isolated from wood pulp of conifer, Sweden. The genome sequence will be valuable for molecular genetic analysis and manipulation of lipid accumulation in this yeast and for developing it as a potential host for biofuel production.CSIR-IMTECH 22858828
Imtechella halotolerans K1TIsolated from an estuarine water sample collected from Kochi, Kerala, India. Strain K1T is known to possess various enzymatic activities, such as lipase, glutamyl transferase, glycine arylamidase, and Glu-Gly-Arg-arylamidase.CSIR-IMTECH 22740661
Burkholderia sp. strain SJ98Isolated from agricultural fields of Assam, India. The draft genome of this strain will be helpful in studying the genetic pathways involved in the degradation of aromatic compounds.CSIR-IMTECH 22628512
Marinilabilia salmonicolor JCM 21150TIsolated from marine mud in the year 1961, Japan. The strain is capable of gelatin liquefaction.CSIR-IMTECH 22740671
Debaryomyces hansenii MTCC 234Isolated from saline environments such as seawater and concentrated brines. It is halotolerant and it also produces riboflavin and arabitol.CSIR-IMTECH 22744717
Rhodococcus imtechensis RKJ300Isolated from pesticide-contaminated soil in Punjab, India. The genome sequence of the strain RKJ300 will be helpful in exploring the molecular pathways involved in the degradation of nitrophenols.CSIR-IMTECH 22689233
Arthrobacter gangotriensis Lz1yDraft Genome Sequence of Arthrobacter gangotriensis Strain Lz1yT, Isolated from a Penguin Rookery Soil Sample Collected in Antarctica, near the Indian Station Dakshin Gangotri.CSIR-CCMB 23766407
Bhargavaea cecembensis DSE10Draft Genome Sequence of Bhargavaea cecembensis Strain DSE10T, Isolated from a Deep-Sea Sediment Sample Collected at a Depth of 5,904 m from the Chagos-Laccadive Ridge System in the Indian OceanCSIR-CCMB 23766406
Mycobacterium avium subsp. paratuberculosis S5Genome Sequence of the “Indian Bison Type” Biotype of Mycobacterium avium subsp. paratuberculosis Strain S5 CSIR-IMTECH 23469332
Acinetobacter baumannii MSP4-16Isolated from mangrove soil sample from Parangipettai (11o30 N,79o 47'E), Tamil Nadu, India. CSIR-IMTECH 23558533
Streptomyces gancidicus BKS 13-15Isolated from mangrove sediment samples collected from the Bhitar Kanika Mangrove Reserve Forest, Odisha, India.CSIR-IMTECH 23599292
Rhodococcus triatomae BKS 15-14Isolated from ant hill soil sample, collected from BhitarKanika Mangrove Reserve Forest, Odisha, India.CSIR-IMTECH 23538907
Arthrobacter sp. SJCon Isolated from a pestiside contaminated site in Punjab, India. Genome will be useful in studying the genetic pathways involved in the degradation of several aromatic compounnds.CSIR-IMTECH 23516196
Rhodococcus ruber BKS 20-38Isolated from palm tree rhizosphere soil of Bhitarkanika National park, Odisha, India.CSIR-IMTECH 23558535
Amycolatopsis decaplanina DSM 44594Amycolatopsis decaplanina strain DSM 44594T which was obtained from open collection of German Collection of Microorganisms and Cell Cultures (DSMZ), Braunschweig, Germany, deposited by Prof. Joachim M. Wink, is a Gram-positive, aerobic, non-motile, catalase-positive actinomycete that forms extensively branched substrate mycelium.CSIR-IMTECH 23558534
Rhodococcus qingshengii BKS 20-40Isolated from palm tree rhizosphere soil of Bhitarkanika National park, Odisha, India, capable of degrading cholesterol moiety. CSIR-IMTECH 23558534
Rhodococcus qingshengii BKS 20-40Isolated from palm tree rhizosphere soil of Bhitarkanika National park, Odisha, India, capable of degrading cholesterol moiety. CSIR-IMTECH 23538906
Citrobacter freundii MTCC 1658Isolated from canal water, USA; have genes for urea decomposition.CSIR-IMTECH 23405287
Leishmania donovani Ld 39SOLiDTM sequencing of genomes of clinical isolates of Leishmania donovani from India confirm leptomonas co-infection and raise some key questions. CSIR-CDRI 23418454