| Name | Description | Institute |
| CPPsite 2.0 | CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides | CSIR-IMTECH |
| ApoCanD | ApoCanD: Database of human apoptotic proteins in the context of cancer. | CSIR-IMTECH |
| PEPlife | PEPlife: A Repository of the Half-life of Peptides. | CSIR-IMTECH |
| ProCarDB | ProCarDB: a database of bacterial carotenoids | CSIR-IMTECH |
| siRNAmod | siRNAmod: A database of experimentally validated chemically modified siRNAs | CSIR-IMTECH |
| HPVbase | HPVbase: a knowledgebase of viral integrations, methylation patterns and microRNAs aberrant expression: As potential biomarkers for Human papillomaviruses mediated carcinomas | CSIR-IMTECH |
| SigMol | SigMol: repertoire of quorum sensing signaling molecules in prokaryotes | CSIR-IMTECH |
| dbEM | dbEM: A database of epigenetic modifiers curated from cancerous and normal genomes | CSIR-IMTECH |
| CancerTope | CancerTope:A Platform for Designing Genome-Based Personalized Immunotherapy or Vaccine against Cancer | CSIR-IMTECH |
| CancerPPD | CancerPPD: a database of anticancer peptides and proteins | CSIR-IMTECH |
| Leish - ExP | Leish - ExP:Leishmania exclusive protein database | CSIR-IICB |
| LeukmiR | LeukmiR: database for miRNA and their targets in Acute lymphoblastic leukemia (ALL) | CSIR-CCMB |
| MIIP | MIIP:Malarial Important Interacting proteins Database | CSIR-IICB |
| EGFRIndb | EGFRIndb: Epidermal Growth Factor Receptor Inhibitor Database | CSIR-IMTECH |
| Specy | Specy: An affordable hand-help Spectrophotometer. | CSIR-IMTECH |
| ONRLDB | ONRLDB:manually curated database of experimentally validated ligands for orphan nuclear receptors. | CSIR-IMTECH |
| C-State | C-State (Chromatin-State): Database to investigate epigenetic landscapes | CSIR-CCMB |
| OncomiRdbB | OncomiRdbB: a comprehensive database of microRNAs and their targets in breast cancer. | CSIR-CCMB |
| dPABBs | dPABBs: A Novel in silico Approach for Predicting and Designing Anti-biofilm Peptides. | CSIR-IMTECH |
| dPABBs | dPABBs: A Novel in silico Approach for Predicting and Designing Anti-biofilm Peptides. | CSIR-IMTECH |
| BIOPYDB | A Biochemical Pathway Database based on manual curation of human cell specific pathway. | CSIR-NCL |
| VIRmiRNA | Resource for experimental viral miRNA and their targets. | CSIR-IMTECH |
| MMpI | A database that cotains detailed matrix metalloproteinase inhibitors and MMP drugs and MMP peptide inhibitors informations. | CSIR-CLRI |
| PRD | The Plant Regulomics Database. | CSIR-IHBT |
| TriplexRNA | A Database of cooperating microRNA and their mutual targets.. | IITR |
| BioPhytMol | BioPhytMol is a manually curated drug discovery community resource on anti-mycobacterial phytomolecules and plant extracts | CSIR-IMTECH |
| IGDD | IGDD (Indian Genetic Disease Database),is a database has been created to keep track of mutations in the causal genes for genetic diseases common in India. | IICB |
| FROG | FROG fingerprints have been devised to capture genomic variations at various levels. | CSIR |
| HerceptinR | HerceptinR is a database of assays performed to test sensitivity or resistance of Herceptin Antibodies towards breast cancer cell lines. | CSIR-IMTECH |
| HIPdb | HIPdb is a manually curated database of experimentally validated HIV inhibitory peptides targeting various steps or proteins involved in the life cycle of HIV like fusion, integration, reverse transcription etc. | CSIR-IMTECH |
| HEMOLYTIK | A Database of Hemolytic and Non-hemolytic Peptide. | CSIR-IMTECH |
| MitoLSDB | A comprehensive resource to study genotype to phenotype correlations in human mitochondrial DNA variations. | CSIR-IGIB |
| Parapep | A Database of Anti-parasitic peptides. | CSIR-IMTECH |
| NPACT | NPACT is a curated database of Plant derived natural compounds that exhibit anti-cancerous activity. | CSIR-IMTECH |
| VIRmiRNA | Resource for experimental viral miRNA and their targets. | CSIR-IMTECH |
| PolysacDB | A comprehensive database of microbial polysaccharide antigens and their antibodies. | CSIR-IMTECH |
| PCMdb | PCMdb is a database of methylated genes found in pancreatic cancer cell lines and tissues.. | CSIR-IMTECH |
| OncomiRdbB | OncomiRdbB is an integrated database consisting of the miRNAs of human and mouse genomes, their sequences, chromosome and gene locations, respective targets and their description, pathways it regulates in breast cancer.. | CSIR-CCMB |
| AvPdb | A Database of Antiviral peptides. | CSIR-IMTECH |
AHTPDB | Database of Antihypertensive Peptides. | CSIR-IMTECH |
| EpiDBase | A Curated database for small molecule modulators of Epigenetic Landscape. | CSIR-IMTECH |
TumorHope | TumorHoPe is a manually curated comprehensive database containing 744 entries of experimentally characterized tumor homing peptides. | CSIR-IMTECH |
| DBETH | DBETH: a Database of Bacterial Exotoxins for Human. | CSIR-IICB |
| CancerDR | CancerDR is a database of 148 anticancer drugs and their effectiveness against around 1000 cancer cell lines. | CSIR-IMTECH |
| PolysacDB | PolysacDB database has been developed to facilitate easy retrieval of information pertaining to microbial surface polysaccharides. Currently this database incarporates nearly 1,550 entries for 147 different antigenic polysaccharides from 367 different microbes collected from about 350 peer-reviewed publications. | CSIR-IMTECH |