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Gaur, Deepika and Kumar, Navinder and Ghosh, Abhirupa and Singh, Prashant and Kumar, Pradeep and Guleria, Jyoti and Kaur, Satinderdeep and Malik , Nikhil and Saha, Sudipto and Nystrom, Thomas and Sharma, Deepak (2022) Ydj1 interaction at nucleotide-binding-domain of yeast Ssa1 impacts Hsp90 collaboration and client maturation. PLoS genetics, 18 (11). ISSN 1553-7404
Chaudhary, Deepika and Singh, Avantika and Marzuki, Mardiana and Ghosh, Abhirupa and Kidwai, Saqib and Gosain, Tannu Priya and Chawla, Kiran and Gupta, Sonu Kumar and Agarwal, Nisheeth and Saha, Sudipto and Kumar, Yashwant and Thakur, Krishan Gopal and Singhal, Amit and Singh, Ramandeep (2022) Identification of small molecules targeting homoserine acetyl transferase from Mycobacterium tuberculosis and Staphylococcus aureus. SCIENTIFIC REPORTS, 12 (1).
Arora, Garima and Tiwari, Prabhakar and Mandal, Rahul Shubhra and Gupta, Arpit and Sharma, Deepak and Saha, Sudipto and Singh, Ramandeep (2014) High throughput screen identifies small molecule inhibitors specific for Mycobacterium tuberculosis phosphoserine phosphatase. The Journal of biological chemistry, 289 (36). pp. 25149-65. ISSN 1083-351X
Krishnamurthi, S and Bhattacharya, A and Mayilraj, Shanmugam and Saha, Sudipto and Schumann, Peter and Chakrabarti, T (2009) Description of Paenisporosarcina quisquiliarum gen. nov., sp. nov., and reclassification of Sporosarcina macmurdoensis Reddy et al. 2003 as Paenisporosarcina macmurdoensis comb. nov. International journal of systematic and evolutionary microbiology, 59 (Pt 6). pp. 1364-70. ISSN 1466-5026
Saha, Sudipto and Raghava, G.P.S. (2007) BTXpred: prediction of bacterial toxins. In silico biology, 7 (4-5). pp. 405-412. ISSN 1386-6338
Saha, Sudipto and Raghava, G.P.S. (2007) Predicting virulence factors of immunological interest. Methods in molecular biology (Clifton, N.J.), 409. pp. 407-15. ISSN 1064-3745
Saha, Sudipto and Raghava, G.P.S. (2007) Prediction methods for B-cell epitopes. Methods in molecular biology (Clifton, N.J.), 409. pp. 387-94. ISSN 1064-3745
Saha, Sudipto and Raghava, G.P.S. (2007) Prediction of allergenic proteins and mapping of IgE epitopes in allergens. Natute Pritocols. ISSN 2043-0116
Saha, Sudipto and Raghava, G.P.S. (2007) Prediction of neurotoxins based on their function and source. In silico biology, 7 (4-5). pp. 369-87. ISSN 1386-6338
Saha, Sudipto and Raghava, G.P.S. (2007) Searching and mapping of B-cell epitopes in Bcipep database. Methods in molecular biology (Clifton, N.J.), 409 (6). pp. 113-124. ISSN 1064-3745
Rashid, Mamoon and Saha, Sudipto and Raghava, G.P.S. (2007) Support Vector Machine-based method for predicting subcellular localization of mycobacterial proteins using evolutionary information and motifs. BMC bioinformatics Vol.8; 2007, 8. p. 337. ISSN 1471-2105
Saha, Sudipto and Zack, Jyoti and Singh, Balvinder and Raghava, G.P.S. (2006) VGIchan: prediction and classification of voltage-gated ion channels. Genomics, proteomics & bioinformatics , 4 (4). pp. 253-258. ISSN 1672-0229
Saha, Sudipto and Raghava, G.P.S. (2006) Prediction of continuous B-cell epitopes in an antigen using recurrent neural network. Proteins, 65 (1). pp. 40-8. ISSN 1097-0134
Saha, Sudipto and Raghava, G.P.S. (2006) AlgPred: prediction of allergenic proteins and mapping of IgE epitopes. Nucleic acids research, 34 (Web Se). W202-9. ISSN 1362-4962
Saha, Sudipto and Raghava, G.P.S. (2006) VICMpred: an SVM-based method for the prediction of functional proteins of Gram-negative bacteria using amino acid patterns and composition. Genomics, proteomics & bioinformatics / Beijing Genomics Institute, 4 (1). pp. 42-7. ISSN 1672-0229
Saha, Sudipto (2006) Computer-aided Prediction of Potential Vaccine candidates based on B-cell Epitopes. PhD thesis, CSIR-IMTECH, Chandigarh/ Jawaharlal Nehru University, New Delhi: India.
Saha, Sudipto and Bhasin, Manoj and Raghava, G.P.S. (2005) BCIpep: A database of B-cell epitopes. Nucleic acids research. ISSN 1362-4962
Saha, Sudipto and Bhasin, Manoj and Raghava, G.P.S. (2005) Bcipep: a database of B-cell epitopes. BMC genomics, 6. p. 79. ISSN 1471-2164
Saha, Sudipto and Raghava, G.P.S. (2004) BcePred: Prediction of Continuous B-cell epitopes in antigenic sequences using physico-chemical properties. In: UNSPECIFIED ICARIS 2004, 2NCS (3239). Springer Science.
