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Maurya, Sudeep K and Aqdas, Mohammad and Das, Deepjyoti Kumar and Singh, Sandeep and Nadeem, Sajid and Kaur, Gurpreet and Agrewala, J N (2020) A multiple T cell epitope comprising DNA vaccine boosts the protective efficacy of Bacillus Calmette–Guérin (BCG) against Mycobacterium tuberculosis. BMC Infectious Diseases, 20.
Hade, Mangesh Dattu and Sethi, Deepti and Datta, Himani and Singh, Sandeep and Thakur, Naveen and Chhaya, Ajay and Dikshit, Kanak L (2020) Truncated Hemoglobin O Carries an Autokinase Activity and Facilitates Adaptation of Under Hypoxia. Antioxidants & redox signaling, 32 (6). pp. 351-362. ISSN 1557-7716
Malik, Rupal and Pinnaka, Anil Kumar and Kaur, Manpreet and Kumar, Vinod and Kulbhushan, Tikko and Singh, Sandeep and Kaushik, Anupama and Singhal, Sonal (2019) Water-soluble glutathione-CdS QDs with exceptional antimicrobial properties synthesized via green route for fluorescence sensing of fluoroquinolones. Journal of Chemical Technology and Biotechnology, 94 (4). pp. 1082-1090. ISSN 02643421
Agrawal, Piyush and Singh, Harinder and Srivastava, Hemant Kumar and Singh, Sandeep and Kishore, Gaurav and Raghava, G.P.S. (2019) Benchmarking of different molecular docking methods for protein-peptide docking. BMC bioinformatics, 19 (Suppl ). p. 426. ISSN 1471-2105
Mathur, Deepika and Singh, Sandeep and Mehta, Ayesha and Agrawal, Piyush and Raghava, G.P.S. (2018) In silico approaches for predicting the half-life of natural and modified peptides in blood. PloS one, 13 (6). e0196829. ISSN 1932-6203
Usmani, Salman Sadullah and Kumar, Rajesh and Kumar, Vinod and Singh, Sandeep and Raghava, G.P.S. (2018) AntiTbPdb: a knowledgebase of anti-tubercular peptides. Database : the journal of biological databases and curation, 2018. ISSN 1758-0463
Nagpal, Gandharva and Usmani, Salman Sadullah and Dhanda, Sandeep Kumar and Kaur, Harpreet and Singh, Sandeep and Sharma, Meenu and Raghava, G.P.S. (2017) Computer-aided designing of immunosuppressive peptides based on IL-10 inducing potential. Scientific Reports, 7. p. 42851. ISSN 2045-2322
Sang, Qing-Xiang Amy and Usmani, Salman Sadullah and Bedi, Gursimran and Samuel, Jesse S. and Singh, Sandeep and Kalra, Sourav and Kumar, Pawan and Ahuja, Anjuman Arora and Sharma, Meenu and Gautam, Ankur and Raghava, G.P.S. (2017) THPdb: Database of FDA-approved peptide and protein therapeutics. PLOS ONE, 12 (7). e0181748. ISSN 1932-6203
Agrawal, Piyush and Bhalla, Sherry and Usmani, Salman Sadullah and Singh, Sandeep and Chaudhary, Kumardeep and Raghava, G.P.S. and Gautam, Ankur (2016) CPPsite 2.0: a repository of experimentally validated cell-penetrating peptides. Nucleic acids research, 44 (D1). D1098-103. ISSN 1362-4962
Singh, Sandeep and Chaudhary, Kumardeep and Dhanda, Sandeep Kumar and Bhalla, Sherry and Usmani, Salman Sadullah and Gautam, Ankur and Tuknait, Abhishek and Agrawal, Piyush and Mathur, Deepika and Raghava, G.P.S. (2016) SATPdb: a database of structurally annotated therapeutic peptides. Nucleic acids research, 44 (D1). D1119-26. ISSN 1362-4962
Mathur, Deepika and Prakash, Satya and Anand, Priya and Kaur, Harpreet and Agrawal, Piyush and Mehta, Ayesha and Kumar, Rajesh and Singh, Sandeep and Raghava, G.P.S. (2016) PEPlife: A Repository of the Half-life of Peptides. Scientific Reports, 6 (1). ISSN 2045-2322
Chaudhary, Kumardeep and Kumar, Ritesh and Singh, Sandeep and Tuknait, Abhishek and Gautam, Ankur and Mathur, Deepika and Anand, Priya and Varshney, Grish C and Raghava, G.P.S. (2016) A Web Server and Mobile App for Computing Hemolytic Potency of Peptides. Scientific reports, 6. ISSN 2045-2322
Gupta, Amit Kumar and Kaur, Karambir and Rajput, Akanksha and Dhanda, Sandeep Kumar and Sehgal, Manika and Khan, Md Shoaib and Monga, Isha and Dar, Showkat Ahmad and Singh, Sandeep and Nagpal, Gandharva and Usmani, Salman Sadullah and Thakur, Anamika and Kaur, Gazaldeep and Sharma, Shivangi and Bhardwaj, Aman and Qureshi, Abid and Raghava, G.P.S. and Kumar, Manoj (2016) ZikaVR: An Integrated Zika Virus Resource for Genomics, Proteomics, Phylogenetic and Therapeutic Analysis. Scientific reports, 6. p. 32713. ISSN 2045-2322
Singh, Harinder and Singh, Sandeep and Raghava, G.P.S. (2015) In silico platform for predicting and initiating β-turns in a protein at desired locations. Proteins, 83 (5). pp. 910-21. ISSN 1097-0134
Kumar, Ravi and Chaudhary, Kumardeep and Sharma, Minakshi and Nagpal, Gandharva and Chauhan, Jagat Singh and Singh, Sandeep and Gautam, Ankur and Raghava, G.P.S. (2015) AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides. Nucleic acids research, 43 (Databa). D956-62. ISSN 1362-4962
Tyagi, Atul and Tuknait, Abhishek and Anand, Priya and Gupta, Sudheer and Sharma, Minakshi and Mathur, Deepika and Joshi, Anshika and Singh, Sandeep and Gautam, Ankur and Raghava, G.P.S. (2015) CancerPPD: a database of anticancer peptides and proteins. Nucleic acids research, 43. D837-43. ISSN 1362-4962
Ettayapuram Ramaprasad, Azhagiya Singam and Singh, Sandeep and Raghava, G.P.S. and Venkatesan, Subramanian (2015) AntiAngioPred: A Server for Prediction of Anti-Angiogenic Peptides. PloS one, 10 (9). e0136990. ISSN 1932-6203
Singh, Sandeep and Singh, Harinder and Tuknait, Abhishek and Chaudhary, Kumardeep and Singh, Balvinder and Kumaran, S and Raghava, G.P.S. (2015) PEPstrMOD: structure prediction of peptides containing natural, non-natural and modified residues. Biology direct, 10 (1). p. 73. ISSN 1745-6150
Singh, Harinder and Kumar, Rahul and Singh, Sandeep and Chaudhary, Kumardeep and Gautam, Ankur and Raghava, G.P.S. (2015) Prediction of anticancer molecules using hybrid model developed on molecules screened against NCI-60 cancer cell lines. BMC cancer, 16 (1). p. 77. ISSN 1471-2407
Singh, Harinder and Singh, Sandeep and Singla, Deepak and Agarwal, Subhash M and Raghava, G.P.S. (2015) QSAR based model for discriminating EGFR inhibitors and non-inhibitors using Random forest. Biology direct, 10. p. 10. ISSN 1745-6150
Singh, Sandeep and Chaudhary, Kumardeep and Dhanda, Sandeep Kumar and Bhalla, Sherry and Usmani, Salman Sadullah and Gautam, Ankur and Tuknait, Abhishek and Agrawal, Piyush and Mathur, Deepika and Raghava, G.P.S. (2015) SATPdb: a database of structurally annotated therapeutic peptides. Nucleic Acids Research, 44 (D1). D1119-D1126. ISSN 0305-1048
Singh, Sandeep and Thakur, Naveen and Oliveira, Ana and Petruk, Ariel A and Hade, Mangesh Dattu and Sethi, Deepti and Bidon-Chanal, Axel and Martí, Marcelo A and Datta, Himani and Parkesh, Raman and Estrin, Dario A and Luque, F Javier and Dikshit, Kanak L (2014) Mechanistic insight into the enzymatic reduction of truncated hemoglobin N of Mycobacterium tuberculosis: role of the CD loop and pre-A motif in electron cycling. The Journal of biological chemistry, 289 (31). pp. 21573-83. ISSN 1083-351X
Kumar, Ravi and Chaudhary, Kumardeep and Sharma, Minakshi and Nagpal, Gandharva and Chauhan, Jagat Singh and Singh, Sandeep and Gautam, Ankur and Raghava, G.P.S. (2014) AHTPDB: a comprehensive platform for analysis and presentation of antihypertensive peptides. Nucleic acids research, 43. D956-62. ISSN 1362-4962
Gautam, Ankur and Chaudhary, Kumardeep and Singh, Sandeep and Joshi, Anshika and Anand, Priya and Tuknait, Abhishek and Mathur, Deepika and Varshney, Grish C and Raghava, G.P.S. (2014) Hemolytik: a database of experimentally determined hemolytic and non-hemolytic peptides. Nucleic acids research, 42 (Databa). D444-9. ISSN 1362-4962
Singh, Harinder and Singh, Sandeep and Raghava, G.P.S. (2014) Evaluation of protein dihedral angle prediction methods. PloS one, 9 (8). e105667. ISSN 1932-6203
Arya, Swati and Sethi, Deepti and Singh, Sandeep and Hade, Mangesh Dattu and Singh, Vijender and Raju, Preeti and Chodisetti, Sathi Babu and Verma, Deepshikha and Varshney, Grish C and Agrewala, J N and Dikshit, Kanak L (2013) Truncated hemoglobin, HbN, is post-translationally modified in Mycobacterium tuberculosis and modulates host-pathogen interactions during intracellular infection. The Journal of biological chemistry, 288 (41). pp. 29987-99. ISSN 1083-351X
Anand, Arvind and Duk, Brian T and Singh, Sandeep and Akbas, Meltem Y and Webster, Dale A and Stark, Benjamin C and Dikshit, Kanak L (2010) Redox-mediated interactions of VHb (Vitreoscilla haemoglobin) with OxyR: novel regulation of VHb biosynthesis under oxidative stress. The Biochemical journal, 426 (3). pp. 271-80. ISSN 1470-8728
Singh, Sandeep (2016) Computer aided structural annotation of peptides with emphasis on therapeutic peptides. PhD thesis, CSIR-IMTECH,Chandigarh/ Jawaharlal Nehru University, New Delhi .
