BioTherapi: Bioinformatics for Therapeutic Peptides and Proteins

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Bioinformatics
 About BioTherapi
 Protein Informatics
 Infrastructure
 Facility to Community
 Drug Databases

Proteins
 Drugs
 Targets
 Production
 Formulation
 Delivery
 Challenges

Peptides
 Peptide drugs
 Prediction
 Synthesis
 Delivery
 Formulation
 Limitations
 Databases

Wet Lab
 Protocols
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Important Links
 Wiki Pages
 Slides (PPT/PDF)
 Documents
 Publications
 Discussions

1. SwePep: A database of endogenous peptides
2. APD2: Antimicrobial Peptide Search
3. SPdb: a signal peptide database
4. PepBank: a database of peptides based on sequence text mining and public peptide data sources
5. Peptide Atlas: a resource for target selection for emerging targeted proteomics workflows
6. Antimic: a database of antimicrobial sequences
7. ASPD
8. BIOPD: Bioactive Peptide Database
9. Our express in tumour peptide database
10. Kegg-Peptide
11. Cancer Immunity: Peptide Database
12. Peptide biol
13. Peptide Conformation database
14. Peptidome: the fact-database for endogenous peptides
15. SAPD: Synthetic Antibiotic Peptide Database
16. PeptideDB: Bioactive peptide database
17. ProMEX: a mass spectral reference database for proteins and protein phosphorylation sites
18. The Arabidopsis unannotated secreted peptide database, a resource for plant peptidomics
19. CAMP: a useful resource for research on antimicrobial peptides
20. Hmrbase: A database of hormones and their receptors
21. T3DB: a comprehensively annotated database of common toxins and their targets
22. MEROPS: the peptidase database
23. PepX: a structural database of non-redundant protein-peptide complexes
24. Neuropeptides from concept to online database .
25. ArachnoServer: a database of protein toxins from spiders
26. UniMaP: finding unique mass and peptide signatures in the human proteome.
27. MHCBN 4.0: A database of MHC/TAP binding peptides and T-cell epitopes
28. NORINE: non-ribosomal peptide database.
29. RAPD: a database of recombinantly-produced antimicrobial peptides
30. NOPdb: Nucleolar Proteome Database--2008 update
31. PhytAMP: a database dedicated to antimicrobial plant peptides
32. ConoServer:a database for conopeptide sequences and structures
33. ATDB: a uni-database platform for animal toxins