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Compilation of Datasets
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Creation of Datasets
1. Proteins/chain
2. General Filters
3. Combination of Sets
4. Extract Sequences
5. Non-redundant Data
6. Annotation of Residues
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Analysis of PDB_ID
BLAST Search
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Perform BLAST Search
This page allow users to perform BLAST search of their protein sequence against protein sequences in PDB. In this module BLASTP is used for performing blast search.
Paste/enter protein sequence in fasta format
or
Submit sequence file
Expect Value
1e-10
1e-6
1e-5
0.01
0.1
1
10
100
500
Weight Matrix
BLOSUM80
BLOSUM62
BLOSUM45
PAM30
PAM70