This page provides datasets compiled from release of PDB (31st Dec 2012). These datasets were generated using commonly used protocols like non-redundant chains, structures solved at high resolution. Compilation of more datasets in progress. For more information click help. Archive datasets.

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Types of Datasets	Description of Dataset	NR chains	No. of residues	Download
Secondary structure (assign using DSSP database, chains using PDB select)	Eight state (H,B,E,G,I,T,S,C) Three state [H=(G,H,I); E=(B,E); C=(T,S)] Three state [H=H; E=E; C=(G,I,B,T,S)]	5877 5877 5877		DSSP8 DSSP3_1 DSSP3_2 Data Description
Irregular Secondary structure Mainly Tight Turns (Promotif used for assignment)	Beta-Turns I Beta-Turns I' Beta-Turns II Beta-Turns II' Beta-Turns IV Beta-Turns VIa1 Beta-Turns VIa2 Beta-Turns VIb Beta-Turns VIII	6691 5424 2324 6618 3197 671 215 1028 4874	1682894 920527 1458248 689107 1673270 220094 72306 315549 1371491	BTI6691 BTI'5424 BTII2324 BTII'6618 BTIV3197 BTVIa1_671 BTVIa2_215 BTVIb1028 BTVIII4874 Data Description
	Gamma-turn-C Gamma-turn-I	1059 5833	350120 1578390	GT1059 GT5833 Data Description
	Buldge-B Buldge-C Buldge-G Bulge-S Buldge-W	271 4926 3694 717 864	94314 1309084 1009877 228174 279730	BLGB271 BLGC4926 BLGG3694 BLGS717 BLGW864
	Hairpin	4931	1300669	HPIN4931
	Psiloop	1197	357336	PLOOP1197
DNA/RNA interacting residues	DNA RNA	417 282	121848 82104	DNA417 RNA282
DNA/RNA interacting proteins	DNA RNA	417 282		DNA417 RNA282
Nucleotide interacting residuess	ATP ADP GTP GDP NAD FAD FMN UDP	228 300 52 88 133 156 103 51	78730 120083 21966 31567 48431 64606 28648 17602	ATP228 ADP300 GTP52 GDP88 NAD133 FAD156 FMN103 UDP51
Nucleotide interacting Proteins	ATP ADP GTP GDP NAD FAD FMN UDP	228 300 52 88 133 156 103 51		ATP228 ADP300 GTP52 GDP88 NAD133 FAD156 FMN103 UDP51
Ligand binding residues	Sulphate Phosphate NAG HEM BME EDO PLP	2604 1002 488 167 163 1095 64	720852 298104 163504 45249 45056 300384 26223	SO4_2604 PO4_1002 NAG488 HEM167 BME163 EDO1095 PLP64
Ligand binding proteins	Sulphate Phosphate NAG HEM BME EDO PLP	2604 1002 488 167 163 1095 64		SO4_2604 PO4_1002 NAG488 HEM167 BME163 EDO1095 PLP64
Metal interacting residues	Fe Mg Ca Mn Zn Co Ni	163 1384 1018 386 1118 149 243	50112 446568 325588 130969 326075 42862 61457	Fe163 MG1384 CA1018 MN386 ZN1118 CO149 NI243
Metal interacting proteins	Fe Mg Ca Mn Zn Co Ni	163 1384 1018 386 1118 149 243		Fe163 MG1384 CA1018 MN386 ZN1118 CO149 NI243

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