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HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1655
HIV-1 (NL4-3)
AF324493
VIF
5108
GAACAAGCCCCAGAAGACCA
76.00
571(38.17%)
293 FT cells
20949027
1654
HIV-1 (NL4-3)
AF324493
VIF
4698
UGGUUUUAUAGACAUCACUA
81.00
255(17.05%)
293 FT cells
20949027
1653
HIV-1 (NL4-3)
AF324493
Gag/pol
4215
GUCAAGGAGUAAUAGAAUCU
90.00
23(1.54%)
293 FT cells
20949027
1652
HIV-1 (NL4-3)
AF324493
Gag/pol
4142
AGUACUACAGUUAAGGCCGC
80.00
48(3.21%)
293 FT cells
20949027
1651
HIV-1 (NL4-3)
AF324493
Gag/pol
4384
GGACAAGUAGACUGUAGCCC
83.00
91(6.08%)
293 FT cells
20949027
1650
HIV-1 (NL4-3)
AF324493
Gag/pol
4114
CCAGCACACAAAGGAAUU
86.00
526(35.16%)
293 FT cells
20949027
1649
HIV-1 (NL4-3)
AF324493
Gag/pol
3487
AAAGUUGUCCCCCUAACGGA
94.00
5(0.33%)
293 FT cells
20949027
1648
HIV-1 (NL4-3)
AF324493
Gag/pol
3410
ACUUUCUAUGUAGAUGGGGC
89.00
687(45.92%)
293 FT cells
20949027
1647
HIV-1 (NL4-3)
AF324493
Gag/pol
3344
GUCAAUACCCCUCCCUUAGU
92.00
301(20.12%)
293 FT cells
20949027
1646
HIV-1 (NL4-3)
AF324493
Gag/pol
3322
GAGUGGGAGUUUGUCAAUAC
82.00
371(24.80%)
293 FT cells
20949027
1645
HIV-1 (NL4-3)
AF324493
Gag/pol
3304
AGAGUAUUGGCAAGCCACCU
85.00
268(17.91%)
293 FT cells
20949027
1644
HIV-1 (NL4-3)
AF324493
Gag/pol
3302
ACAGAGUAUUGGCAAGCAAC
90.00
1(0.07%)
293 FT cells
20949027
1643
HIV-1 (NL4-3)
AF324493
Gag/pol
2987
GAAGCAGAGCUAGAACUGGC
81.00
255(17.05%)
293 FT cells
20949027
1642
HIV-1 (NL4-3)
AF324493
Gag/pol
2893
GGCAAGUCAGAUUUAUGCAG
87.00
256(17.11%)
293 FT cells
20949027
1641
HIV-1 (NL4-3)
AF324493
Gag/pol
2855
GUCAAUGACAUACAGAAAUU
85.00
45(3.01%)
293 FT cells
20949027
1640
HIV-1 (NL4-3)
AF324493
Gag/pol
2822
ACAGCUGGACUGUCAAUGAC
87.00
311(20.79%)
293 FT cells
20949027
1639
HIV-1 (NL4-3)
AF324493
Gag/pol
2816
GUACAGCCUAUAGUGCUGCC
82.00
191(12.77%)
293 FT cells
20949027
1638
HIV-1 (NL4-3)
AF324493
Gag/pol
1873
UACAGGAGCAGAUGAUACAG
81.00
842(56.28%)
293 FT cells
20949027
1637
HIV-1 (NL4-3)
AF324493
Gag/pol
1816
UCUGAGAGGGAGUUGUUGUC
84.00
0(0.00%)
293 FT cells
20949027
1636
HIV-1 (NL4-3)
AF324493
Gag/pol
1771
ACAGCGACCCCUCGUCACAA
93.00
0(0.00%)
293 FT cells
20949027
1635
HIV-1 (NL4-3)
AF324493
Gag/pol
1753
ACAACUCCCUCUCAGAAGCA
92.00
97(6.48%)
293 FT cells
20949027
1634
HIV-1 (NL4-3)
AF324493
Gag/pol
1749
GACAACAACUCCCUCUCAGA
91.00
95(6.35%)
293 FT cells
20949027
1633
HIV-1 (NL4-3)
AF324493
Gag/pol
1722
CUGAGAGACAGGCUAAUUU
91.00
548(36.63%)
293 FT cells
20949027
1632
HIV-1 (NL4-3)
AF324493
Gag/pol
1699
GAGACAACAACUCCCUCUCA
91.00
96(6.42%)
293 FT cells
20949027
1631
HIV-1 (NL4-3)
AF324493
Gag/pol
1668
CCACCAGAAGAGAGCUUCAG
82.00
181(12.10%)
293 FT cells
20949027
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