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Page - 1 of 2
HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1004
HIV-1 (NL4-3)
AF324493
Vif
5138
GGAAAGCUAAGGACUGGUU
96.00
4(0.27%)
Magi
12087358
1005
HIV-1 (NL4-3)
AF324493
Vif
5323
AGCACACAAGUAGACCCUG
95.00
436(29.14%)
Magi
12087358
1006
HIV-1 (NL4-3)
AF324493
Vif
5481
CUUGGCACUAGCAGCAUUA
95.90
131(8.76%)
Magi
12087358
1094
HIV-1 (R3b)
K02013
vif
N/A
GGAAAGCUAAGGACUGGUU
87.00
4(0.27%)
CEMx174
15851006
1422
HIV-1 (NL4-3)
AF324493
Vif
5049
CAGAUGGCAGGUGAUGAUUGU
90.00
927(61.97%)
Hela
19397929
1473
HIV-1 (NL4-3)
AF324493
Vif
9
CAGAUGGCAGGUGAUGAUUGU
81.10
927(61.97%)
HEK 293a
19497094
1474
HIV-1 (NL4-3)
AF324493
Vif
10
AGAUGGCAGGUGAUGAUUGUG
90.30
897(59.96%)
HEK 293a
19497094
1475
HIV-1 (NL4-3)
AF324493
Vif
11
GAUGGCAGGUGAUGAUUGUGU
90.60
897(59.96%)
HEK 293a
19497094
1476
HIV-1 (NL4-3)
AF324493
Vif
12
AUGGCAGGUGAUGAUUGUGU
69.20
911(60.90%)
HEK 293a
19497094
1477
HIV-1 (NL4-3)
AF324493
Vif
14
GGCAGGUGAUGAUUGUGUGGC
84.40
923(61.70%)
HEK 293a
19497094
1478
HIV-1 (NL4-3)
AF324493
Vif
15
GCAGGUGAUGAUUGUGUGGCA
93.60
920(61.50%)
HEK 293a
19497094
1479
HIV-1 (NL4-3)
AF324493
Vif
37
GUAGACAGGAUGAGGAUUAA
95.10
233(15.57%)
HEK 293a
19497094
1480
HIV-1 (NL4-3)
AF324493
Vif
131
GCAUCUCCUAUGGCAGGAAG
83.50
808(54.01%)
HEK 293a
19497094
1485
HIV-1 (NL4-3)
AF324493
Vif
9
AAGAAGCGGAGACAGCGACG
81.10
769(51.40%)
HEK 293a
19497094
1544
HIV-1 (NL4-3)
AF324493
Vif
5049
CAGAUGGCAGAUGAUGCUUGU
97.00
0(0.00%)
SupT1
19397929
1587
ZA012
AF286227
vif
K*5195
GUUCAGAAGUACACAUCCC
85.00
797(53.28%)
Hela
15831707
1586
CN54
AX149771
vif
K*5195
GUUCAGAAGUACACAUCCC
75.00
797(53.28%)
Hela
15831707
1584
RL42
U71182
vif
K*5195
GUUCAGAAGUACACAUCCC
80.00
797(53.28%)
Hela
15831707
1582
UG29
K02013
vif
K*5195
GUUCAGAAGUACACAUCCC
95.00
797(53.28%)
Hela
15831707
1581
HIV-1(P89)
K02013
vif
K*5195
GUUCAGAAGUACACAUCCC
82.00
797(53.28%)
Hela
15831707
1578
HIV-1(BAL)
K02013
vif
K*5195
GUUCAGAAGUACACAUCCC
80.00
797(53.28%)
Hela
15831707
1575
HIV-1 (IIIB)
EU541617
vif
K*5195
GUUCAGAAGUACACAUCCC
80.00
797(53.28%)
Hela
15831707
1588
UG24
K02013
vif
K*5195
GUUCAGAAGUACACAUCCC
85.00
797(53.28%)
Hela
15831707
1609
HIV-1 (NL4-3)
AF324493
vif
K*5195
GUUCAGAAGUACACAUCCCAC
88.00
487(32.55%)
293 T
18596982
1655
HIV-1 (NL4-3)
AF324493
VIF
5108
GAACAAGCCCCAGAAGACCA
76.00
571(38.17%)
293 FT cells
20949027
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