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Next   PreviousPage - 1 of 8 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) Target Conservation * Cell line PubMed 1095 HIV-1 (NL4-3) AF324493 Tat 5889 CUGCUUGUACCAAAUGCUAUU 85.00 21(1.40%) Hela 16290277 1003 HIV-1 (IIIB) EU541617 Gag 1608 GAUUGUACUGAGAGACAGGCU 76.00 183(12.23%) Hela 12042777 1110 HIV-1 (NL4-3) AF324493 Nef 9142 GCUACUUCCCUGAUUGGCAGAACUA 90.00 208(13.90%) Hela 16857988 1111 HIV-1 (NL4-3) AF324493 Nef 9147 UUCCCUGAUUGGCAGAACUACACAC 80.00 270(18.05%) Hela 16857988 1204 HIV-1 HXB2 K03455 Gag 1314 AAGAUUUAAACACCAUGCUAAAC -21.00 294(19.65%) Hela 17132935 1205 HIV-1 HXB2 K03455 Gag 1800 AAGAAAUGAUGACAGCAUGUC 28.00 915(61.16%) Hela 17132935 1206 HIV-1 HXB2 K03455 Gag 2294 AAGCUCUAUUAGAUACAGGAGC -24.00 647(43.25%) Hela 17132935 1207 HIV-1 HXB2 K03455 Gag 2833 AAGAAAAAAUCAGUAACAGUAC 61.00 625(41.78%) Hela 17132935 1208 HIV-1 HXB2 K03455 Gag 2930 GUAUAAACAAUGAGACACCAG 60.00 389(26.00%) Hela 17132935 1209 HIV-1 HXB2 K03455 Gag 4352 AAGCCAUGCAUGGACAAGUAGAC 29.00 592(39.57%) Hela 17132935 1210 HIV-1 HXB2 K03455 Gag 4647 AAGUCAAGGAGUAGUAGAAUC -29.00 548(36.63%) Hela 17132935 1213 HIV-1 (NL4-3) AF324493 Tat 5997 AAGAGCUCAUCAGAACAGUCA 92.00 1(0.07%) Hela 17360756 1214 HIV-1 (LAI) K02013 LTR N/A AGACCAGAUCUGAGCCUGGUU 76.00 399(26.67%) Hela 17360756 1359 93JP-NH1 AB052995 Pol 4175 UGGAGGAAAUGAACAAGUAGA 97.00 1096(73.26%) Hela 17996047 1358 93JP-NH1 AB052995 Pol 3011 AGGAUCACCAGCAAUAUUCCA 94.10 774(51.74%) Hela 17996047 1357 93JP-NH1 AB052995 Pol 3006 UGGAAAGGAUCACCAGCAAUA 85.30 957(63.97%) Hela 17996047 1231 HIV-1 (NL4-3) AF324493 LTR 505 GGGAACCCACUGCUUAAGCCU 63.80 584(39.04%) Hela 17996047 1232 HIV-1 (NL4-3) AF324493 LTR 509 ACCCACUGCUUAAGCCUCAAU 92.80 652(43.58%) Hela 17996047 1233 HIV-1 (NL4-3) AF324493 LTR 510 CCCACUGCUUAAGCCUCAAUA 95.70 654(43.72%) Hela 17996047 1234 HIV-1 (NL4-3) AF324493 LTR 512 CACUGCUUAAGCCUCAAUAAA 94.20 462(30.88%) Hela 17996047 1235 HIV-1 (NL4-3) AF324493 LTR 515 UGCUUAAGCCUCAAUAAAGCU 66.70 465(31.08%) Hela 17996047 1236 HIV-1 (NL4-3) AF324493 LTR 521 AGCCUCAAUAAAGCUUGCCUU 95.70 446(29.81%) Hela 17996047 1237 HIV-1 (NL4-3) AF324493 LTR 554 UAGUGUGUGCCCGUCUGUUGU 94.20 286(19.12%) Hela 17996047 1238 HIV-1 (NL4-3) AF324493 LTR 575 GUGACUCUGGUAACUAGAGAU 46.40 436(29.14%) Hela 17996047 1239 HIV-1 (NL4-3) AF324493 LTR 689 ACGCAGGACUCGGCUUGCUGA 36.20 733(49.00%) Hela 17996047

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