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Next   PreviousPage - 1 of 2 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) Target Conservation * Cell line PubMed 1060 HIV-1 (NL4-3) AF324493 Nef 8834 AAGGGAAAGAAUGAGACGAGC 49.00 97(6.48%) 293 T 15564478 1061 HIV-1 (NL4-3) AF324493 Nef 9059 AAAAGAAAAGGGGGGACUGGA 63.00 1213(81.08%) 293 T 15564478 1062 HIV-1 (NL4-3) AF324493 Nef 9139 AAGGCUACUUCCCUGAUUGGC 48.00 493(32.95%) 293 T 15564478 1195 HIV-1 (LAI) K02013 Nef 8656 CUUUUUAAAAGAAAAGGGG 54.00 1159(77.47%) 293 T 16959541 1196 HIV-1 (LAI) K02013 Nef 8657 UUUUUAAAAGAAAAGGGGG -13.00 1210(80.88%) 293 T 16959541 1197 HIV-1 (LAI) K02013 Nef 8658 UUUUAAAAGAAAAGGGGGG -6.00 1417(94.72%) 293 T 16959541 1198 HIV-1 (LAI) K02013 Nef 8659 UUUAAAAGAAAAGGGGGGA 5.00 1418(94.79%) 293 T 16959541 1199 HIV-1 (LAI) K02013 Nef 8660 UUAAAAGAAAAGGGGGGAC -20.00 1211(80.95%) 293 T 16959541 1200 HIV-1 (LAI) K02013 Nef 8661 UAAAAGAAAAGGGGGGACU 8.00 1215(81.22%) 293 T 16959541 1201 HIV-1 (LAI) K02013 Nef 8662 AAAAGAAAAGGGGGGACUG -14.00 1216(81.28%) 293 T 16959541 1202 HIV-1 (LAI) K02013 Nef 8663 AAAGAAAAGGGGGGACUGG -5.00 1215(81.22%) 293 T 16959541 1203 HIV-1 (LAI) K02013 Nef 8664 AAGAAAAGGGGGGACUGGA -21.00 1221(81.62%) 293 T 16959541 1421 HIV-1 (LAI) K02013 Nef 8664 AAGAAAAGGGGGGACUGGA 61.00 1221(81.62%) 293 T 19384894 1569 HIV-1 (NL4-3) AF324493 Nef 8950 GUGCCUGGCUAGAAGCACA 15.00 270(18.05%) SupT 18727943 1007 HIV-1 (NL4-3) AF324493 Nef 8950 GUGCCUGGCUAGAAGCACA 95.90 270(18.05%) Magi 12087358 1048 HIV-1 (NL4-3) AF324493 Nef N/A TTCCAGTCACACCTCAGGTAC 6.00 10(0.67%) 293 T 15336659 1063 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGGCAAGUGGUCAAAACGUA 48.30 0(0.00%) MT-4 T/Jurkat T 15601474 1064 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGCCAGCAGCAGAUGGGGUG 36.50 1(0.07%) MT-4 T/Jurkat T 15601474 1065 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGUGCCUGGCUAGAAGCACA 78.40 1(0.07%) MT-4 T/Jurkat T 15601474 1066 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGCACAAGAGGAGGAGA 70.90 0(0.00%) MT-4 T/Jurkat T 15601474 1067 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGACUGGAAGGGCUAAUUUG 50.50 0(0.00%) MT-4 T/Jurkat T 15601474 1068 HIV-1 (IIIB) EU541617 Nef N/A GCUCGACGGCUACUUCCCUGAUUGGC 65.50 0(0.00%) MT-4 T/Jurkat T 15601474 1069 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGGUAGAAGAGGCCAAUGAA 58.00 0(0.00%) MT-4 T/Jurkat T 15601474 1070 HIV-1 (IIIB) EU541617 Nef N/A GCGUCGACGCAUUUCAUCACAUGGCCC 48.30 2(0.13%) MT-4 T/Jurkat T 15601474 1071 HIV-1 (LAI) K02013 Nef 8553 GUGCCUGGCUAGAAGCACA 90.00 270(18.05%) SupT1 15687388

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