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Next   PreviousPage - 1 of 5 HIVsir ID HIV Strain NCBI Accession Target Gene Position of siRNA target Sense Sequence of siRNA Efficacy (%) Target Conservation * Cell line PubMed 1550 HIV-1 (NL4-3) AF324493 LTR 626 UCUCUAGCAGUGGCGCCCG 15.00 701(46.86%) 293 T 16840344 1553 HIV-1 (NL4-3) AF324493 LTR 396 ACUGGGGAGUGGCGAGCCCUC 21.00 134(8.96%) Molt-4 19233310 1552 HIV-1 (NL4-3) AF324493 LTR 350 GGGACUUUCCGCUGGGGACUU 87.00 435(29.08%) Molt-4 19233310 1008 HIV-1 (NL4-3) AF324493 LTR 9543 AGACCAGAUCUGAGCCUGG 95.90 399(26.67%) Magi 12087358 1015 HIV-1 (IIIB) EU541617 LTR K*9215 GAUGGUGCUACAAGCUAGUAC 94.00 50(3.34%) 293 T 12391237 1628 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A CUCUCUGGUUAGACCAGAUCU 16.00 137(9.16%) Hela S3 14762201 1627 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A AGACCAGAUCUGAGCCUGGGA 10.00 377(25.20%) Hela S3 14762201 1626 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A GGGAGCUCUCUGGCUAACUAG 38.00 119(7.95%) Hela S3 14762201 1625 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A UGGCUAACUAGGGAACCCACU 51.00 117(7.82%) Hela S3 14762201 1624 Hiv-1 Ptar-gl2(vctr) K02013 LTR N/A CUUAAGCCUCAAUAAAGCUUG 38.00 458(30.61%) Hela S3 14762201 1053 HIV-1 (NL4-3) AF324493 LTR N/A AGUGGCGCCCGAACAGGGAC 0.00 720(48.13%) SupT1 15527848 1072 HIV-1 (NL4-3) AF324493 LTR 553 AAGUAGUGUGUGCCCGUCUGU 52.20 264(17.65%) 293 T 15750613 1073 N/A N/A LTR 553 AAGUAGUGUGUGCCCGUCUGU 57.00 264(17.65%) 293 T 15750613 1090 HIV-1 (NL4-3) AF324493 LTR 9261 AAGGAGAGAACACCAGCUUGU 38.00 6(0.40%) 293 T 15750613 1109 HIV-1 (NL4-3) AF324493 LTR 9073 GACUGGAAGGGCUAAUUCA 50.00 57(3.81%) 293 T 16840344 1114 HIV-1 (LAI) K02013 LTR 798 AGAUGGGUGCGAGAGCGUC 83.00 936(62.57%) 293 T 16948865 1214 HIV-1 (LAI) K02013 LTR N/A AGACCAGAUCUGAGCCUGGUU 76.00 399(26.67%) Hela 17360756 1216 HIV-1 (LAI) K02013 LTR 328 GGAGAGAGAUGGGUGCGAG 3.00 926(61.90%) 293 T 17628029 1217 HIV-1 (LAI) K02013 LTR 334 AGAUGGGUGCGAGAGCGUC 30.00 936(62.57%) 293 T 17628029 1229 HIV-1 HXB2 K03455 LTR 247 AAGUGUUAGAGUGGAGGUUUGAC 54.00 12(0.80%) HEK 293 17959645 1231 HIV-1 (NL4-3) AF324493 LTR 505 GGGAACCCACUGCUUAAGCCU 63.80 584(39.04%) Hela 17996047 1232 HIV-1 (NL4-3) AF324493 LTR 509 ACCCACUGCUUAAGCCUCAAU 92.80 652(43.58%) Hela 17996047 1233 HIV-1 (NL4-3) AF324493 LTR 510 CCCACUGCUUAAGCCUCAAUA 95.70 654(43.72%) Hela 17996047 1234 HIV-1 (NL4-3) AF324493 LTR 512 CACUGCUUAAGCCUCAAUAAA 94.20 462(30.88%) Hela 17996047 1235 HIV-1 (NL4-3) AF324493 LTR 515 UGCUUAAGCCUCAAUAAAGCU 66.70 465(31.08%) Hela 17996047

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