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Page - 1 of 4
HIVsir ID
HIV Strain
NCBI Accession
Target Gene
Position of siRNA target
Sense Sequence of siRNA
Efficacy (%)
Target Conservation *
Cell line
PubMed
1423
HIV-1 (NL4-3)
AF324493
LTR
63
CAAGGCUACUUCCCUGAUUG
51.20
500(33.42%)
HEK 293a
19497094
1424
HIV-1 (NL4-3)
AF324493
LTR
506
GGAACCCACUGCUUAAGCCU
14.90
608(40.64%)
HEK 293a
19497094
1425
HIV-1 (NL4-3)
AF324493
LTR
507
GAACCCACUGCUUAAGCCUC
-1.80
654(43.72%)
HEK 293a
19497094
1426
HIV-1 (NL4-3)
AF324493
LTR
509
ACCCACUGCUUAAGCCUCA A
91.50
653(43.65%)
HEK 293a
19497094
1427
HIV-1 (NL4-3)
AF324493
LTR
510
CCCACUGCUUAAGCCUCAAUA
98.90
654(43.72%)
HEK 293a
19497094
1428
HIV-1 (NL4-3)
AF324493
LTR
516
GCUUAAGCCUCAAUAAAGCUU
99.40
463(30.95%)
HEK 293a
19497094
1429
HIV-1 (NL4-3)
AF324493
LTR
522
GCCUCAAUAAAGCUUGCCUU
52.60
451(30.15%)
HEK 293a
19497094
1430
HIV-1 (NL4-3)
AF324493
LTR
527
AAUAAAGCUUGCCUUGAGUGC
96.10
405(27.07%)
HEK 293a
19497094
1431
HIV-1 (NL4-3)
AF324493
LTR
553
GUAGUGUGUGCCCGUCUGUU
67.00
292(19.52%)
HEK 293a
19497094
1432
HIV-1 (NL4-3)
AF324493
Gag
532
GGAGCCACCCCACAAGAUU U
54.10
976(65.24%)
HEK 293a
19497094
1433
HIV-1 (NL4-3)
AF324493
Gag
532
GGAGCCACCCCACAAGAUUUA
95.10
943(63.03%)
HEK 293a
19497094
1434
HIV-1 (NL4-3)
AF324493
Gag
533
GAGCCACCCCACAAGAUUU
95.90
978(65.37%)
HEK 293a
19497094
1435
HIV-1 (NL4-3)
AF324493
Gag
533
GAGCCACCCCACAAGAUUUAA
94.80
941(62.90%)
HEK 293a
19497094
1436
HIV-1 (NL4-3)
AF324493
Gag
534
AGCCACCCCACAAGAUUUA
85.30
945(63.17%)
HEK 293a
19497094
1437
HIV-1 (NL4-3)
AF324493
Gag
534
AGCCACCCCACAAGAUUUAAA
66.40
942(62.97%)
HEK 293a
19497094
1438
HIV-1 (NL4-3)
AF324493
Gag
535
GCCACCCCACAAGAUUUAAA
48.60
981(65.57%)
HEK 293a
19497094
1439
HIV-1 (NL4-3)
AF324493
Gag
578
GACAUCAAGCAGCCAUGCAA
73.20
699(46.72%)
HEK 293a
19497094
1440
HIV-1 (NL4-3)
AF324493
Gag
698
GAAGUGACAUAGCAGGAACU
87.90
929(62.10%)
HEK 293a
19497094
1441
HIV-1 (NL4-3)
AF324493
Pol
242
AUACAGGAGCAGAUGAUACA
99.50
844(56.42%)
HEK 293a
19497094
1442
HIV-1 (NL4-3)
AF324493
Pol
246
AGGAGCAGAUGAUACAGUAUU
99.50
1159(77.47%)
HEK 293a
19497094
1443
HIV-1 (NL4-3)
AF324493
Pol
247
GGAGCAGAUGAUACAGUAUUA
97.30
1145(76.54%)
HEK 293a
19497094
1444
HIV-1 (NL4-3)
AF324493
Pol
248
GAGCAGAUGAUACAGUAUUA
99.70
1145(76.54%)
HEK 293a
19497094
1445
HIV-1 (NL4-3)
AF324493
Pol
248
GAGCAGAUGAUACAGUAUUAG
99.70
1136(75.94%)
HEK 293a
19497094
1446
HIV-1 (NL4-3)
AF324493
pol
249
AGCAGAUGAUACAGUAUUAG
99.00
1136(75.94%)
HEK 293a
19497094
1447
HIV-1 (NL4-3)
AF324493
pol
249
AGCAGAUGAUACAGUAUUAGA
99.50
1129(75.47%)
HEK 293a
19497094
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