ASPsiDb:
Allele specific siRNA Database
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BLAST Search
ASPsiBLAST
BLASTyour siRNA sequence against ASPsiDb.
Enter your siRNA sequence below in
FASTA
format
Example
>XYZ
CAAGGUGAUGAUGAUCACU
Or load it from disk
Expect
0.0001
0.01
1
10
100
1000
Matrix
PAM30
PAM70
BLOSUM80
BLOSUM62
BLOSUM45
Perform ungapped alignment
Other advanced options:
Graphical Overview
Alignment view
Pairwise
master-slave with identities
master-slave without identities
flat master-slave with identities
flat master-slave without identities
BLAST XML
Hit Table
Descriptions
0
10
50
100
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500
Alignments
0
10
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Color schema
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No color schema