aspsirna0190 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna0190
siRNA Name: siAPP plus G
Gene:Amyloid beta (A4) precursor protein(APP)
Disease:Alzheimers disease
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):UGAAGUGAAGAUGGAUGCAG
Target Mutation: c.2010_2011delGAinsTC (p.Lys670_Met671delinsAsnLeu)
Wild siRNA (As strand):NA
ASP-siRNA (As strand):ACUUCACUUCUACCUACGUC
Mismatch position in siRNA: NA
Mutant allele (5'->3'): UGAAGUGAAGAUGGAUGCAG
ASP-siRNA (As strand):ACUUCACUUCUACCUACGUC
ASP-siRNA efficacy for mutant allele:83
Wild allele (5'->3'): NA
ASP-siRNA (As strand):ACUUCACUUCUACCUACGUC
ASP-siRNA efficacy for wild allele:Poor efficacy
Percentage discrimination for ASP-siRNA:High discrimination
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:Poor efficacy
Wild allele (5'->3'): NA
ASP-siRNA (As strand):ACUUCACUUCUACCUACGUC
Wild sirna efficacy for mutant allele:83
Percentage discrimination for wild siRNA:Moderate discrimination
Concentration:10mg
Orientation:Sense
Mismatch in:nil
UniProt ID: P05067
Target sequence: GAGATCTCTGAAGTGAAGATGGATGCAGAATTCCGACATGA
Genbank Accesion: NM_000484.3
Cell-line: Cos-7
Experimental technique used: Western blot
Transfection method: Lipofectamine Plus
siRNA expression method: Integrated DNA Technologies
Post-transfection duration: 72 hours
OMID ID: 600274
KEGG disease ID:H00056
Reference:14754988

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