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siRNA Id: | aspsirna0230
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siRNA Name: | Alpha-SYN-P13
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| Gene: | Synuclein, alpha (SNCA) |
| Disease: | Parkinsons disease (PD) |
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Wild allele/target (5'->3'): | GAAGCAGCAGGAAAGACAA
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Mutant allele/target (5'->3'): | GAAGCACCAGGAAAGACAA
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Target Mutation: | c.88G>C,p.Ala30Pro
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Wild siRNA (As strand): | CUUCGUCGUCCUUUCUGUU
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ASP-siRNA (As strand): | CUUCGUGGUCCUUUCUGUU
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Mismatch position in siRNA: | G13C |
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Mutant allele (5'->3'): | GAAGCACCAGGAAAGACAA
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ASP-siRNA (As strand): | CUUCGUGGUCCUUUCUGUU
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ASP-siRNA efficacy for mutant allele: | 40
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Wild allele (5'->3'): | GAAGCAGCAGGAAAGACAA
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ASP-siRNA (As strand): | CUUCGUGGUCCUUUCUGUU
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ASP-siRNA efficacy for wild allele: | 10
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Percentage discrimination for ASP-siRNA: | 30
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Wild allele (5'->3'): | GAAGCAGCAGGAAAGACAA
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Wild siRNA (As strand): | CUUCGUCGUCCUUUCUGUU
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Wild sirna efficacy for wild allele: | High efficacy
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Wild allele (5'->3'): | GAAGCAGCAGGAAAGACAA
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ASP-siRNA (As strand): | CUUCGUGGUCCUUUCUGUU
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Wild sirna efficacy for mutant allele: | Moderate efficacy
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Percentage discrimination for wild siRNA: | Poor discrimination
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| Concentration: | 100nM |
| Orientation: | Sense |
| Mismatch in: | siRNA |
| UniProt ID: | P37840 |
| Target sequence: | AACAGGGUGUGGCAGAAGCAGCAGGAAAGACAAAGAGG |
| Genbank Accesion: | NM_000345.3 |
| Cell-line: | HEK293 |
| Experimental technique used: | Dual luciferase reporter assay |
| Transfection method: | Lipofectamine 2000 |
| siRNA expression method: | Sigma Genosys |
| Post-transfection duration: | 48 hours |
| OMID ID: | 168600 |
| KEGG disease ID: | H00057 |
| Reference: | 22031823 |
