aspsirna0376 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna0376
siRNA Name: siR206H_A10
Gene:Activin A receptor type I (ACVR1)
Disease:Fibrodysplasia Ossificans Progressiva (FOP)
Wild allele/target (5'->3'): CAGUGGCUCGCCAGAUUAC
Mutant allele/target (5'->3'):CAGUGGCUCACCAGAUUAC
Target Mutation: c.617G>A,p.Arg206His
Wild siRNA (As strand):GUCACCGAGCGGUCUAAUG
ASP-siRNA (As strand):GUCACCGAGUGGUCUAAUG
Mismatch position in siRNA: U10C
Mutant allele (5'->3'): CAGUGGCUCACCAGAUUAC
ASP-siRNA (As strand):GUCACCGAGUGGUCUAAUG
ASP-siRNA efficacy for mutant allele:NA
Wild allele (5'->3'): CAGUGGCUCGCCAGAUUAC
ASP-siRNA (As strand):GUCACCGAGUGGUCUAAUG
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): CAGUGGCUCGCCAGAUUAC
Wild siRNA (As strand):GUCACCGAGCGGUCUAAUG
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): CAGUGGCUCGCCAGAUUAC
ASP-siRNA (As strand):GUCACCGAGUGGUCUAAUG
Wild sirna efficacy for mutant allele:NA
Percentage discrimination for wild siRNA:NA
Concentration:20nM
Orientation:Double strand
Mismatch in:siRNA
UniProt ID: Q06900
Target sequence: AAGAACAGTGGCTCGCCAGATTACACTGT
Genbank Accesion: NM_001105.4
Cell-line: HeLa
Experimental technique used: Dual luciferase reporter assay
Transfection method: Lipofectamine 2000
siRNA expression method: Sigma-aldrich
Post-transfection duration: 24 hours
OMID ID: 135100
KEGG disease ID:H00430
Reference:22130450

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