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siRNA Id: | aspsirna0541
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siRNA Name: | SM2-RG(16)
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| Gene: | Leucine rich repeat kinase 2 (LRRK2) |
| Disease: | Parkinsons disease (PD) |
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Wild allele/target (5'->3'): | GCUCGCGCUUCUUCUUCCC
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Mutant allele/target (5'->3'): | GCUGGCGCUUCUUCUUCCC
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Target Mutation: | c.4321C>G,p.Arg1441Gly
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Wild siRNA (As strand): | CGAGCGCGAAGAAGAAGGG
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ASP-siRNA (As strand): | CGACCGCGAAGAAGAAGGG
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Mismatch position in siRNA: | C16G |
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Mutant allele (5'->3'): | GCUGGCGCUUCUUCUUCCC
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ASP-siRNA (As strand): | CGACCGCGAAGAAGAAGGG
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ASP-siRNA efficacy for mutant allele: | 71
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Wild allele (5'->3'): | GCUCGCGCUUCUUCUUCCC
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ASP-siRNA (As strand): | CGACCGCGAAGAAGAAGGG
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ASP-siRNA efficacy for wild allele: | 10
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Percentage discrimination for ASP-siRNA: | 61
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Wild allele (5'->3'): | GCUCGCGCUUCUUCUUCCC
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Wild siRNA (As strand): | CGAGCGCGAAGAAGAAGGG
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Wild sirna efficacy for wild allele: | NA
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Wild allele (5'->3'): | GCUCGCGCUUCUUCUUCCC
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ASP-siRNA (As strand): | CGACCGCGAAGAAGAAGGG
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Wild sirna efficacy for mutant allele: | NA
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Percentage discrimination for wild siRNA: | NA
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| Concentration: | 400ng |
| Orientation: | Sense |
| Mismatch in: | siRNA |
| UniProt ID: | Q5S007 |
| Target sequence: | CCTTGGCTCTTCAATATAAAGGCTCGCGCTTCTTCTTCCCCTG |
| Genbank Accesion: | NM_198578.3 |
| Cell-line: | 293T |
| Experimental technique used: | Dual luciferase reporter assay |
| Transfection method: | Arrest-In reagent |
| siRNA expression method: | Open-Biosystems |
| Post-transfection duration: | 48 hours |
| OMID ID: | 168600 |
| KEGG disease ID: | H00057 |
| Reference: | 21712955 |
