| |
|---|
|
siRNA Id: | aspsirna0931
|
|
siRNA Name: | MJD4
|
| Gene: | Ataxin-3 (ATXN3) |
| Disease: | Machado-Joseph Disease (MJD)/Spinocerebellar ataxia type 3 (SCA3) |
|
Wild allele/target (5'->3'): | GCAGCAGCAGCAGGGGGAC
|
|
Mutant allele/target (5'->3'): | GCAGCAGCAGCAGCGGGAC
|
|
Target Mutation: | c.209_211CAG(8_36),(p.Gln298_Gln305=)
|
|
Wild siRNA (As strand): | CGUCGUCGUCGUCCCCCUG
|
|
ASP-siRNA (As strand): | CGUCGUCGUCGUCGCCCUG
|
|
Mismatch position in siRNA: | G6C |
|
Mutant allele (5'->3'): | GCAGCAGCAGCAGCGGGAC
|
|
ASP-siRNA (As strand): | CGUCGUCGUCGUCGCCCUG
|
|
ASP-siRNA efficacy for mutant allele: | 80
|
|
Wild allele (5'->3'): | GCAGCAGCAGCAGGGGGAC
|
|
ASP-siRNA (As strand): | CGUCGUCGUCGUCGCCCUG
|
|
ASP-siRNA efficacy for wild allele: | 80
|
|
Percentage discrimination for ASP-siRNA: | 0
|
|
Wild allele (5'->3'): | GCAGCAGCAGCAGGGGGAC
|
|
Wild siRNA (As strand): | CGUCGUCGUCGUCCCCCUG
|
|
Wild sirna efficacy for wild allele: | NA
|
|
Wild allele (5'->3'): | GCAGCAGCAGCAGGGGGAC
|
|
ASP-siRNA (As strand): | CGUCGUCGUCGUCGCCCUG
|
|
Wild sirna efficacy for mutant allele: | NA
|
|
Percentage discrimination for wild siRNA: | NA
|
| Concentration: | 10nM |
| Orientation: | Double strand |
| Mismatch in: | siRNA |
| UniProt ID: | P54252 |
| Target sequence: | CAGCAGCAGCAGCAGCAGCAGGGGGACCUAUCAGGA |
| Genbank Accesion: | NM_004993.5 |
| Cell-line: | 293T |
| Experimental technique used: | Western blot |
| Transfection method: | Lipofectamine Plus |
| siRNA expression method: | Chemically synthesized |
| Post-transfection duration: | 48 hours |
| OMID ID: | 109150 |
| KEGG disease ID: | H00063 |
| Reference: | 15236410 |
