aspsirna1011 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna1011
siRNA Name: P11wt
Gene:Cu,Zn superoxide dismutase (SOD1)
Disease:Amyotrophic Lateral Sclerosis (ALS)
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):GAGACUUGGGCAAUGUGAC
Target Mutation: c.256G>C,p.Gly86Arg
Wild siRNA (As strand):NA
ASP-siRNA (As strand):CUCUGAACCCGUUACACUG
Mismatch position in siRNA: NA
Mutant allele (5'->3'): GAGACUUGGGCAAUGUGAC
ASP-siRNA (As strand):CUCUGAACCCGUUACACUG
ASP-siRNA efficacy for mutant allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CUCUGAACCCGUUACACUG
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CUCUGAACCCGUUACACUG
Wild sirna efficacy for mutant allele:NA
Percentage discrimination for wild siRNA:NA
Concentration:100nM
Orientation:Double strand
Mismatch in:nil
UniProt ID: P00441
Target sequence: GAGAGGCAUGUUGGAGACUUGGGCAAUGUGACUGCUGACAAAG
Genbank Accesion: NM_000454.4
Cell-line: HeLa
Experimental technique used: Western blot
Transfection method: Lipofectamine 2000
siRNA expression method: Chemically synthesized
Post-transfection duration: 48 hours
OMID ID: 105400
KEGG disease ID:H00058
Reference:12934714

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