aspsirna1768 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna1768
siRNA Name: La21-3'm2m12
Gene:P. luciferase
Disease:NA
Wild allele/target (5'->3'): ACCGCUGGAGAGCAACUGC
Mutant allele/target (5'->3'):UGCUGAGAGGAUCAGCAUU
Target Mutation: NA
Wild siRNA (As strand):UGGCGACCUCUCGUUGACG
ASP-siRNA (As strand):ACGACUCUCCUAGUCGUAA
Mismatch position in siRNA: A1G,A2C,A8U
Mutant allele (5'->3'): UGCUGAGAGGAUCAGCAUU
ASP-siRNA (As strand):ACGACUCUCCUAGUCGUAA
ASP-siRNA efficacy for mutant allele:NA
Wild allele (5'->3'): ACCGCUGGAGAGCAACUGC
ASP-siRNA (As strand):ACGACUCUCCUAGUCGUAA
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:NA
Wild allele (5'->3'): ACCGCUGGAGAGCAACUGC
Wild siRNA (As strand):UGGCGACCUCUCGUUGACG
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): ACCGCUGGAGAGCAACUGC
ASP-siRNA (As strand):ACGACUCUCCUAGUCGUAA
Wild sirna efficacy for mutant allele:98
Percentage discrimination for wild siRNA:NA
Concentration:40nM
Orientation:Double strand
Mismatch in:siRNA
UniProt ID: P08659
Target sequence: GCUCAACGAGAGGUCGCCA
Genbank Accesion: M15077.1
Cell-line: HeLa
Experimental technique used: Dual luciferase reporter assay
Transfection method: Lipofectamine 2000
siRNA expression method: Proligo
Post-transfection duration: 48 hours
OMID ID: NA
KEGG disease ID:NA
Reference:14741366

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