aspsirna2791 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna2791
siRNA Name: SEQ ID NO 180
Gene:Diazepam binding inhibitor (DBI)(GABA receptor modulator, acyl-CoA binding protein)
Disease:NA
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):CCAUGAAAGCUUACAUCAA
Target Mutation: c.178 plus 29C>A
Wild siRNA (As strand):NA
ASP-siRNA (As strand):GGUACUUUCGAAUGUAGUU
Mismatch position in siRNA: NA
Mutant allele (5'->3'): CCAUGAAAGCUUACAUCAA
ASP-siRNA (As strand):GGUACUUUCGAAUGUAGUU
ASP-siRNA efficacy for mutant allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):GGUACUUUCGAAUGUAGUU
ASP-siRNA efficacy for wild allele:NA
Percentage discrimination for ASP-siRNA:48
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):GGUACUUUCGAAUGUAGUU
Wild sirna efficacy for mutant allele:NA
Percentage discrimination for wild siRNA:NA
Concentration:100nM
Orientation:Sense
Mismatch in:siRNA
UniProt ID: P07108
Target sequence: acgggcaaggccaagtgggatgcctggaatgagctgaaagggacttccaaggaagatgccatgaaagcttacatcaacaaagtagaaga
Genbank Accesion: NM_020548.7
Cell-line: HeLa
Experimental technique used: Dual luciferase reporter assay
Transfection method: Lipofectamine 2000
siRNA expression method: Dharmacon
Post-transfection duration: 24 hours
OMID ID: 125950
KEGG disease ID:NA
Reference:US007576197B2

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