aspsirna2928 details

Purple = Wild vs mutant target sequence along with mutation information
Brown= Wild vs ASP-siRNA description along with positional differnece between two
Light pink= ASP siRNA efficacy for mutant vs wild allele
Green= Wild siRNA efficacy for Wild vs Mutant allele
siRNA Id:aspsirna2928
siRNA Name: 453
Gene:K-RAS (KRAS)
Disease:NA
Wild allele/target (5'->3'): NA
Mutant allele/target (5'->3'):GUUGAGACCUUCUAAUUGG
Target Mutation: NA
Wild siRNA (As strand):NA
ASP-siRNA (As strand):CAACUCUGGAAGAUUAACC
Mismatch position in siRNA: NA
Mutant allele (5'->3'): GUUGAGACCUUCUAAUUGG
ASP-siRNA (As strand):CAACUCUGGAAGAUUAACC
ASP-siRNA efficacy for mutant allele:83
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CAACUCUGGAAGAUUAACC
ASP-siRNA efficacy for wild allele:70
Percentage discrimination for ASP-siRNA:13
Wild allele (5'->3'): NA
Wild siRNA (As strand):NA
Wild sirna efficacy for wild allele:NA
Wild allele (5'->3'): NA
ASP-siRNA (As strand):CAACUCUGGAAGAUUAACC
Wild sirna efficacy for mutant allele:NA
Percentage discrimination for wild siRNA:NA
Concentration:100nM
Orientation:Sense
Mismatch in:siRNA
UniProt ID: P01116
Target sequence: TTAAATCTTTTCTTCAACTTGAGTCTTTGAAGATAG
Genbank Accesion: NM_033360.3
Cell-line: HEK293
Experimental technique used: Dual luciferase reporter assay
Transfection method: Lipofectamine 2000
siRNA expression method: Dharmacon
Post-transfection duration: 24 hours
OMID ID: 190070
KEGG disease ID:NA
Reference:US007576197B2

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